RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ILDR1Q86SU0 546 aaPredicted RBP25.08■■□□□ 1.6
SMPD1-205ENST00000531303 DLG5Q8TDM6 1919 aa25.07■■□□□ 1.6
SMPD1-205ENST00000531303 GAS2L2Q8NHY3 880 aa25.05■■□□□ 1.6
SMPD1-205ENST00000531303 PARP4Q9UKK3 1724 aaKnown RBP25.05■■□□□ 1.6
SMPD1-205ENST00000531303 AMOTQ4VCS5 1084 aa25.04■■□□□ 1.6
SMPD1-205ENST00000531303 ZNF530Q6P9A1 599 aaPredicted RBP25.04■■□□□ 1.6
SMPD1-205ENST00000531303 TRPC5Q9UL62 973 aaPredicted RBP25.03■■□□□ 1.6
SMPD1-205ENST00000531303 OVOS2A0A0G2JMS6 1433 aa25.03■■□□□ 1.6
SMPD1-205ENST00000531303 QTRT2Q9H974 415 aaKnown RBP25.02■■□□□ 1.6
SMPD1-205ENST00000531303 SPG7Q9UQ90 795 aa25.02■■□□□ 1.6
SMPD1-205ENST00000531303 THRAP3Q9Y2W1 955 aaKnown RBP25.02■■□□□ 1.6
SMPD1-205ENST00000531303 ZBED9Q6R2W3 1325 aa25.02■■□□□ 1.6
SMPD1-205ENST00000531303 FAM98CQ17RN3 349 aaKnown RBP25.02■■□□□ 1.6
SMPD1-205ENST00000531303 ZCRB1Q8TBF4 217 aaKnown RBP25.02■■□□□ 1.6
SMPD1-205ENST00000531303 WNK3Q9BYP7 1800 aa25.01■■□□□ 1.59
SMPD1-205ENST00000531303 TRIM35Q9UPQ4 493 aa25.01■■□□□ 1.59
SMPD1-205ENST00000531303 ATRNO75882 1429 aa25■■□□□ 1.59
SMPD1-205ENST00000531303 WWC1Q8IX03 1113 aa25■■□□□ 1.59
SMPD1-205ENST00000531303 GJD4Q96KN9 370 aaPredicted RBP25■■□□□ 1.59
SMPD1-205ENST00000531303 DCTN1Q14203 1278 aa24.99■■□□□ 1.59
SMPD1-205ENST00000531303 C1orf141Q5JVX7 400 aa24.99■■□□□ 1.59
SMPD1-205ENST00000531303 NGEFQ8N5V2 710 aa24.99■■□□□ 1.59
SMPD1-205ENST00000531303 THUMPD2Q9BTF0 503 aaKnown RBP24.99■■□□□ 1.59
SMPD1-205ENST00000531303 DISP2A7MBM2 1401 aa24.99■■□□□ 1.59
SMPD1-205ENST00000531303 A0A0G2JS52 829 aa24.98■■□□□ 1.59
SMPD1-205ENST00000531303 MYT1Q01538 1121 aa24.98■■□□□ 1.59
SMPD1-205ENST00000531303 ZNF772Q68DY9 489 aaPredicted RBP24.98■■□□□ 1.59
SMPD1-205ENST00000531303 BARGINQ6ZT62 677 aa24.98■■□□□ 1.59
SMPD1-205ENST00000531303 PKD1L3Q7Z443 1732 aa24.98■■□□□ 1.59
SMPD1-205ENST00000531303 DDX54Q8TDD1 881 aaKnown RBP24.98■■□□□ 1.59
SMPD1-205ENST00000531303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMPD1-205ENST00000531303 GNAT3A8MTJ3 354 aa24.97■■□□□ 1.59
SMPD1-205ENST00000531303 MCM10Q7L590 875 aa24.97■■□□□ 1.59
SMPD1-205ENST00000531303 RTF1Q92541 710 aaKnown RBP24.97■■□□□ 1.59
SMPD1-205ENST00000531303 MAP3K5Q99683 1374 aa24.97■■□□□ 1.59
SMPD1-205ENST00000531303 LMOD3Q0VAK6 560 aa24.96■■□□□ 1.59
SMPD1-205ENST00000531303 CCDC27Q2M243 656 aa24.96■■□□□ 1.59
SMPD1-205ENST00000531303 CDCA7Q9BWT1 371 aaPredicted RBP24.96■■□□□ 1.59
SMPD1-205ENST00000531303 GLI3P10071 1580 aa24.96■■□□□ 1.59
SMPD1-205ENST00000531303 EXOC5O00471 708 aa24.96■■□□□ 1.59
SMPD1-205ENST00000531303 AKAP4Q5JQC9 854 aa24.96■■□□□ 1.59
SMPD1-205ENST00000531303 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
SMPD1-205ENST00000531303 CYP27B1O15528 508 aa24.95■■□□□ 1.58
SMPD1-205ENST00000531303 PHKG2P15735 406 aa24.94■■□□□ 1.58
SMPD1-205ENST00000531303 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
SMPD1-205ENST00000531303 IFNL2Q8IZJ0 200 aa24.94■■□□□ 1.58
SMPD1-205ENST00000531303 ZNF521Q96K83 1311 aa24.94■■□□□ 1.58
SMPD1-205ENST00000531303 PCDH11XQ9BZA7 1347 aa24.94■■□□□ 1.58
SMPD1-205ENST00000531303 PCDH11YQ9BZA8 1340 aa24.94■■□□□ 1.58
SMPD1-205ENST00000531303 SHANK3Q9BYB0 1731 aa24.93■■□□□ 1.58
SMPD1-205ENST00000531303 DDB1Q16531 1140 aa24.93■■□□□ 1.58
SMPD1-205ENST00000531303 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
SMPD1-205ENST00000531303 PLEKHG2Q9H7P9 1386 aa24.93■■□□□ 1.58
SMPD1-205ENST00000531303 CDCA7LQ96GN5 454 aa24.92■■□□□ 1.58
SMPD1-205ENST00000531303 GOLGA2Q08379 1002 aa24.91■■□□□ 1.58
SMPD1-205ENST00000531303 IL17REQ8NFR9 667 aa24.91■■□□□ 1.58
SMPD1-205ENST00000531303 LGR6Q9HBX8 967 aa24.91■■□□□ 1.58
SMPD1-205ENST00000531303 VIRMAQ69YN4 1812 aaKnown RBP24.9■■□□□ 1.58
SMPD1-205ENST00000531303 HTATSF1O43719 755 aaKnown RBP24.9■■□□□ 1.58
SMPD1-205ENST00000531303 LAS1LQ9Y4W2 734 aaKnown RBP24.9■■□□□ 1.58
SMPD1-205ENST00000531303 LRRC37A3O60309 1634 aa24.9■■□□□ 1.58
SMPD1-205ENST00000531303 WDR63Q8IWG1 891 aa24.89■■□□□ 1.58
SMPD1-205ENST00000531303 RGS17Q9UGC6 210 aaPredicted RBP24.89■■□□□ 1.58
SMPD1-205ENST00000531303 TNS2Q63HR2 1409 aa24.89■■□□□ 1.57
SMPD1-205ENST00000531303 KAT6BQ8WYB5 2073 aa24.88■■□□□ 1.57
SMPD1-205ENST00000531303 RNMTO43148 476 aaKnown RBP24.88■■□□□ 1.57
SMPD1-205ENST00000531303 SPINK5Q9NQ38 1064 aaPredicted RBP24.88■■□□□ 1.57
SMPD1-205ENST00000531303 HSP90AB1P08238 724 aaKnown RBP24.86■■□□□ 1.57
SMPD1-205ENST00000531303 RBM6P78332 1123 aaKnown RBP24.86■■□□□ 1.57
SMPD1-205ENST00000531303 SEPT12Q8IYM1 358 aa24.86■■□□□ 1.57
SMPD1-205ENST00000531303 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
SMPD1-205ENST00000531303 CALD1Q05682 793 aaKnown RBP24.85■■□□□ 1.57
SMPD1-205ENST00000531303 PDE3BQ13370 1112 aa24.85■■□□□ 1.57
SMPD1-205ENST00000531303 DCAF5Q96JK2 942 aa24.84■■□□□ 1.57
SMPD1-205ENST00000531303 SCN11AQ9UI33 1791 aa24.84■■□□□ 1.57
SMPD1-205ENST00000531303 KDM6AO15550 1401 aaPredicted RBP24.84■■□□□ 1.57
SMPD1-205ENST00000531303 ONECUT3O60422 494 aaPredicted RBP24.83■■□□□ 1.57
SMPD1-205ENST00000531303 SLFN5Q08AF3 891 aa24.83■■□□□ 1.57
SMPD1-205ENST00000531303 POTEAQ6S8J7 498 aa24.83■■□□□ 1.57
SMPD1-205ENST00000531303 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
SMPD1-205ENST00000531303 RXRBP28702 533 aa24.83■■□□□ 1.56
SMPD1-205ENST00000531303 E9PSI1 815 aa24.82■■□□□ 1.56
SMPD1-205ENST00000531303 TEFQ10587 303 aa24.82■■□□□ 1.56
SMPD1-205ENST00000531303 MIS18AQ9NYP9 233 aa24.82■■□□□ 1.56
SMPD1-205ENST00000531303 IL16Q14005 1332 aa24.81■■□□□ 1.56
SMPD1-205ENST00000531303 NKX1-1Q15270 411 aaPredicted RBP24.81■■□□□ 1.56
SMPD1-205ENST00000531303 TSR2Q969E8 191 aaKnown RBP24.81■■□□□ 1.56
SMPD1-205ENST00000531303 CEMIPQ8WUJ3 1361 aa24.81■■□□□ 1.56
SMPD1-205ENST00000531303 GNAI1P63096 354 aa24.79■■□□□ 1.56
SMPD1-205ENST00000531303 MYH16Q9H6N6 1097 aa24.79■■□□□ 1.56
SMPD1-205ENST00000531303 IFT57Q9NWB7 429 aa24.79■■□□□ 1.56
SMPD1-205ENST00000531303 ADAMTS7Q9UKP4 1686 aa24.79■■□□□ 1.56
SMPD1-205ENST00000531303 CABP4P57796 275 aa24.78■■□□□ 1.56
SMPD1-205ENST00000531303 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
SMPD1-205ENST00000531303 FAM182BQ5T319 152 aa24.78■■□□□ 1.56
SMPD1-205ENST00000531303 CFAP44Q96MT7 982 aa24.78■■□□□ 1.56
SMPD1-205ENST00000531303 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-205ENST00000531303 NFATC2IPQ8NCF5 419 aa24.77■■□□□ 1.56
SMPD1-205ENST00000531303 BRWD3Q6RI45 1802 aa24.77■■□□□ 1.56
SMPD1-205ENST00000531303 ZNF853P0CG23 659 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms