RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 ANKRD36BQ8N2N9 1353 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 TESPA1A2RU30 521 aaPredicted RBP6.11□□□□□ -1.43
GMDS-207ENST00000530459 CCDC66A2RUB6 948 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 MCM2P49736 904 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 CBX1P83916 185 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 TAF7LQ5H9L4 462 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 CFAP53Q96M91 514 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 ZDHHC9Q9Y397 364 aa6.11□□□□□ -1.43
GMDS-207ENST00000530459 MAP3K4Q9Y6R4 1608 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 NRXN1Q9ULB1 1477 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 PRPF40AO75400 957 aaKnown RBP6.1□□□□□ -1.43
GMDS-207ENST00000530459 PTMAP06454 111 aaKnown RBP6.1□□□□□ -1.43
GMDS-207ENST00000530459 TMEM87AQ8NBN3 555 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 KIAA1524Q8TCG1 905 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 AKT1S1Q96B36 256 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 USP26Q9BXU7 913 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 MFRPQ9BY79 579 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 TSPYL1Q9H0U9 437 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 FAM53CQ9NYF3 392 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
GMDS-207ENST00000530459 MORC2Q9Y6X9 1032 aaPredicted RBP6.1□□□□□ -1.43
GMDS-207ENST00000530459 ZC3H13Q5T200 1668 aaKnown RBP6.1□□□□□ -1.43
GMDS-207ENST00000530459 PTCH1Q13635 1447 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 IFT172Q9UG01 1749 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 SYCE3A1L190 88 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 ARID3CA6NKF2 412 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 TULP2O00295 520 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 ST18O60284 1047 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 BRD1O95696 1058 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 SLFN14P0C7P3 912 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 CHAF1AQ13111 956 aaPredicted RBP6.09□□□□□ -1.43
GMDS-207ENST00000530459 CUL4AQ13619 759 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 DNTTIP2Q5QJE6 756 aaKnown RBP6.09□□□□□ -1.43
GMDS-207ENST00000530459 SMYD5Q6GMV2 418 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 ITPRIPQ8IWB1 547 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 TMEM57Q8N5G2 664 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 SSH1Q8WYL5 1049 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
GMDS-207ENST00000530459 DNAJC2Q99543 621 aaKnown RBP6.09□□□□□ -1.43
GMDS-207ENST00000530459 RBM42Q9BTD8 480 aaKnown RBP6.09□□□□□ -1.43
GMDS-207ENST00000530459 LNPKQ9C0E8 428 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 SMC4Q9NTJ3 1288 aa6.09□□□□□ -1.43
GMDS-207ENST00000530459 DDX41Q9UJV9 622 aaKnown RBP6.09□□□□□ -1.43
GMDS-207ENST00000530459 AK9Q5TCS8 1911 aa6.09□□□□□ -1.44
GMDS-207ENST00000530459 TET3O43151 1660 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 DEPDC5O75140 1603 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 ZBTB7BO15156 539 aaPredicted RBP6.08□□□□□ -1.44
GMDS-207ENST00000530459 EPB41L2O43491 1005 aaKnown RBP6.08□□□□□ -1.44
GMDS-207ENST00000530459 HNRNPMP52272 730 aaKnown RBP eCLIP6.08□□□□□ -1.442e-6■■■■□ 25.4
GMDS-207ENST00000530459 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
GMDS-207ENST00000530459 MORC1Q86VD1 984 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 BCL2L13Q9BXK5 485 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 CGNQ9P2M7 1197 aaKnown RBP6.08□□□□□ -1.44
GMDS-207ENST00000530459 RBM27Q9P2N5 1060 aaKnown RBP6.08□□□□□ -1.44
GMDS-207ENST00000530459 CTNNA3Q9UI47 895 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 NOB1Q9ULX3 412 aaKnown RBP6.08□□□□□ -1.44
GMDS-207ENST00000530459 VWDEQ8N2E2 1590 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 ASXL2Q76L83 1435 aa6.08□□□□□ -1.44
GMDS-207ENST00000530459 CDC42BPGQ6DT37 1551 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 KDM4AO75164 1064 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 ZMYND10O75800 440 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 EXOSC9Q06265 439 aaKnown RBP6.07□□□□□ -1.44
GMDS-207ENST00000530459 TTC22Q5TAA0 569 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 PLEKHF1Q96S99 279 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 TSPYL2Q9H2G4 693 aaPredicted RBP6.07□□□□□ -1.44
GMDS-207ENST00000530459 CALCOCO1Q9P1Z2 691 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 PCDHB8Q9UN66 801 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 PCDHB13Q9Y5F0 798 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 SYCP2Q9BX26 1530 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 COL3A1P02461 1466 aaPredicted RBP6.07□□□□□ -1.44
GMDS-207ENST00000530459 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 NSD3Q9BZ95 1437 aa6.07□□□□□ -1.44
GMDS-207ENST00000530459 RTL1A6NKG5 1358 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 SMTNL1A8MU46 457 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 GOLGA6L6A8MZA4 724 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 REC8O95072 547 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 ADCY5O95622 1261 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 U2AF2P26368 475 aaKnown RBP eCLIP6.06□□□□□ -1.449e-12■■■■□ 19.7
GMDS-207ENST00000530459 TMPOP42166 694 aaKnown RBP6.06□□□□□ -1.44
GMDS-207ENST00000530459 PSEN1P49768 467 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 IRX5P78411 483 aaPredicted RBP6.06□□□□□ -1.44
GMDS-207ENST00000530459 PKP1Q13835 747 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 TERF2Q15554 542 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 SLFNL1Q499Z3 407 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 CCDC183Q5T5S1 534 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 ANKRD45Q5TZF3 282 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 ZNF771Q7L3S4 317 aaPredicted RBP6.06□□□□□ -1.44
GMDS-207ENST00000530459 PLEKHM2Q8IWE5 1019 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 TIGD1Q96MW7 591 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 NSFL1CQ9UNZ2 370 aaKnown RBP6.06□□□□□ -1.44
GMDS-207ENST00000530459 TRIM35Q9UPQ4 493 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 PAXBP1Q9Y5B6 917 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 MRC2Q9UBG0 1479 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 ABCA9Q8IUA7 1624 aa6.06□□□□□ -1.44
GMDS-207ENST00000530459 ANKRD26Q9UPS8 1709 aa6.05□□□□□ -1.44
GMDS-207ENST00000530459 ABCC4O15439 1325 aa6.05□□□□□ -1.44
GMDS-207ENST00000530459 GSPT1P15170 499 aaKnown RBP6.05□□□□□ -1.44
GMDS-207ENST00000530459 MX1P20591 662 aa6.05□□□□□ -1.44
GMDS-207ENST00000530459 MTHFSP49914 203 aa6.05□□□□□ -1.44
GMDS-207ENST00000530459 ANAPC15P60006 121 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms