RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 A0A0G2JS52 829 aa7.65□□□□□ -1.18
RPUSD4-204ENST00000530036 MYT1Q01538 1121 aa7.65□□□□□ -1.18
RPUSD4-204ENST00000530036 DDB1Q16531 1140 aa7.65□□□□□ -1.18
RPUSD4-204ENST00000530036 KRT27Q7Z3Y8 459 aa7.65□□□□□ -1.18
RPUSD4-204ENST00000530036 USHBP1Q8N6Y0 703 aa7.65□□□□□ -1.18
RPUSD4-204ENST00000530036 MYBBP1AQ9BQG0 1328 aaKnown RBP7.65□□□□□ -1.18
RPUSD4-204ENST00000530036 ADAMTS7Q9UKP4 1686 aa7.64□□□□□ -1.19
RPUSD4-204ENST00000530036 DIAPH1O60610 1272 aaKnown RBP7.64□□□□□ -1.19
RPUSD4-204ENST00000530036 BTAF1O14981 1849 aa7.64□□□□□ -1.19
RPUSD4-204ENST00000530036 ITGB4P16144 1822 aa7.64□□□□□ -1.19
RPUSD4-204ENST00000530036 SCN11AQ9UI33 1791 aa7.64□□□□□ -1.19
RPUSD4-204ENST00000530036 AEBP1Q8IUX7 1158 aa7.63□□□□□ -1.19
RPUSD4-204ENST00000530036 RAPGEF4Q8WZA2 1011 aa7.63□□□□□ -1.19
RPUSD4-204ENST00000530036 CFAP53Q96M91 514 aa7.63□□□□□ -1.19
RPUSD4-204ENST00000530036 DLG5Q8TDM6 1919 aa7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 EXOC5O00471 708 aa7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 TATP17735 454 aaPredicted RBP7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 PDE3BQ13370 1112 aa7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 MARCH10Q8NA82 808 aaPredicted RBP7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 RREB1Q92766 1687 aa7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 KAT6BQ8WYB5 2073 aa7.62□□□□□ -1.19
RPUSD4-204ENST00000530036 PCDH11XQ9BZA7 1347 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 PCDH11YQ9BZA8 1340 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 YY1P25490 414 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 FAM182BQ5T319 152 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 SULT6B1Q6IMI4 303 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 FAM196AQ6ZSG2 479 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 ZCRB1Q8TBF4 217 aaKnown RBP7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 LY75O60449 1722 aa7.61□□□□□ -1.19
RPUSD4-204ENST00000530036 CYP27B1O15528 508 aa7.6□□□□□ -1.19
RPUSD4-204ENST00000530036 SIPA1L3O60292 1781 aaPredicted RBP7.6□□□□□ -1.19
RPUSD4-204ENST00000530036 MRC1P22897 1456 aa7.6□□□□□ -1.19
RPUSD4-204ENST00000530036 NUP188Q5SRE5 1749 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 U2SURPO15042 1029 aaKnown RBP7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 HMOX1P09601 288 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 CCDC125Q86Z20 511 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 RSPH6AQ9H0K4 717 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 SPG7Q9UQ90 795 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 NUDCQ9Y266 331 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 KDM6AO15550 1401 aaPredicted RBP7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 PAPPAQ13219 1627 aa7.59□□□□□ -1.19
RPUSD4-204ENST00000530036 ANP32CO43423 234 aa7.58□□□□□ -1.2
RPUSD4-204ENST00000530036 PHKG2P15735 406 aa7.58□□□□□ -1.2
RPUSD4-204ENST00000530036 NKX1-1Q15270 411 aaPredicted RBP7.58□□□□□ -1.2
RPUSD4-204ENST00000530036 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
RPUSD4-204ENST00000530036 DDX54Q8TDD1 881 aaKnown RBP7.58□□□□□ -1.2
RPUSD4-204ENST00000530036 ZNF831Q5JPB2 1677 aa7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 CICQ96RK0 1608 aaPredicted RBP7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 UBR2Q8IWV8 1755 aa7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 FCHSD2O94868 740 aa7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 TRIM37O94972 964 aa7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 PLEKHO1Q53GL0 409 aaPredicted RBP7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 ZNF530Q6P9A1 599 aaPredicted RBP7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 TAF1LQ8IZX4 1826 aa7.57□□□□□ -1.2
RPUSD4-204ENST00000530036 SENP3-EIF4A1A0A087X0R7 540 aa7.56□□□□□ -1.2
RPUSD4-204ENST00000530036 PRKAR2BP31323 418 aa7.56□□□□□ -1.2
RPUSD4-204ENST00000530036 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
RPUSD4-204ENST00000530036 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
RPUSD4-204ENST00000530036 PTF1AQ7RTS3 328 aa7.56□□□□□ -1.2
RPUSD4-204ENST00000530036 BCL11BQ9C0K0 894 aaPredicted RBP7.56□□□□□ -1.2
RPUSD4-204ENST00000530036 C5P01031 1676 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 KCNQ2O43526 872 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 AKAP4Q5JQC9 854 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 ACSBG1Q96GR2 724 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 PHACTR3Q96KR7 559 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 MAP3K5Q99683 1374 aa7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 COL5A3P25940 1745 aaPredicted RBP7.55□□□□□ -1.2
RPUSD4-204ENST00000530036 KDM3BQ7LBC6 1761 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 PLSCR1O15162 318 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 HSP90AB1P08238 724 aaKnown RBP7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 BAG6P46379 1132 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 C1orf141Q5JVX7 400 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 GAS2L2Q8NHY3 880 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 QSER1Q2KHR3 1735 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 CEMIPQ8WUJ3 1361 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 TUBGCP6Q96RT7 1819 aa7.54□□□□□ -1.2
RPUSD4-204ENST00000530036 TJP1Q07157 1748 aa7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 ERVV-2B6SEH9 535 aa7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 PRIM1P49642 420 aaKnown RBP7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 DEFB132Q7Z7B7 95 aa7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 CAMKK2Q96RR4 588 aa7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 MRS2Q9HD23 443 aa7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
RPUSD4-204ENST00000530036 GNAT3A8MTJ3 354 aa7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 RNMTO43148 476 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 APBA3O96018 575 aa7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 EN1Q05925 392 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 DIEXFQ68CQ4 756 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 SYTL4Q96C24 671 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-204ENST00000530036 PNNQ9H307 717 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms