RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ATP5J2-PTCD1G3V325 749 aa7.36□□□□□ -1.23
CTR9-205ENST00000529898 GPC1P35052 558 aa7.36□□□□□ -1.23
CTR9-205ENST00000529898 SENP3-EIF4A1A0A087X0R7 540 aa7.35□□□□□ -1.23
CTR9-205ENST00000529898 SCTRP47872 440 aa7.35□□□□□ -1.23
CTR9-205ENST00000529898 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTR9-205ENST00000529898 CCDC155Q8N6L0 562 aa7.35□□□□□ -1.23
CTR9-205ENST00000529898 OSBPL3Q9H4L5 887 aa7.35□□□□□ -1.23
CTR9-205ENST00000529898 POLMQ9NP87 494 aaPredicted RBP7.35□□□□□ -1.23
CTR9-205ENST00000529898 A0A1W2PRU2 124 aa7.34□□□□□ -1.23
CTR9-205ENST00000529898 WASHC4Q2M389 1173 aa7.34□□□□□ -1.23
CTR9-205ENST00000529898 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
CTR9-205ENST00000529898 GDPD2Q9HCC8 539 aa7.34□□□□□ -1.23
CTR9-205ENST00000529898 PCDHB11Q9Y5F2 797 aa7.34□□□□□ -1.23
CTR9-205ENST00000529898 CLN3Q13286 438 aa7.33□□□□□ -1.24
CTR9-205ENST00000529898 CYP2U1Q7Z449 544 aa7.33□□□□□ -1.24
CTR9-205ENST00000529898 LYSMD3Q7Z3D4 306 aa7.32□□□□□ -1.24
CTR9-205ENST00000529898 GPR161Q8N6U8 529 aaKnown RBP7.32□□□□□ -1.24
CTR9-205ENST00000529898 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
CTR9-205ENST00000529898 GNRH1P01148 92 aa7.31□□□□□ -1.24
CTR9-205ENST00000529898 ITGA6P23229 1130 aa7.31□□□□□ -1.24
CTR9-205ENST00000529898 SOX11P35716 441 aa7.31□□□□□ -1.24
CTR9-205ENST00000529898 ZSCAN1Q8NBB4 408 aa7.31□□□□□ -1.24
CTR9-205ENST00000529898 CDCA7Q9BWT1 371 aaPredicted RBP7.31□□□□□ -1.24
CTR9-205ENST00000529898 COG6Q9Y2V7 657 aa7.31□□□□□ -1.24
CTR9-205ENST00000529898 HRH3Q9Y5N1 445 aa7.31□□□□□ -1.24
CTR9-205ENST00000529898 VAC14Q08AM6 782 aa7.3□□□□□ -1.24
CTR9-205ENST00000529898 TSGA10IPQ3SY00 556 aa7.3□□□□□ -1.24
CTR9-205ENST00000529898 WDR44Q5JSH3 913 aa7.3□□□□□ -1.24
CTR9-205ENST00000529898 SPATA31C2B4DYI2 1134 aa7.29□□□□□ -1.24
CTR9-205ENST00000529898 ABL2P42684 1182 aa7.29□□□□□ -1.24
CTR9-205ENST00000529898 KRT76Q01546 638 aa7.29□□□□□ -1.24
CTR9-205ENST00000529898 USP4Q13107 963 aa7.28□□□□□ -1.24
CTR9-205ENST00000529898 XAGE2Q96GT9 111 aa7.28□□□□□ -1.24
CTR9-205ENST00000529898 GMCL1Q96IK5 515 aa7.28□□□□□ -1.24
CTR9-205ENST00000529898 ESYT1Q9BSJ8 1104 aa7.28□□□□□ -1.24
CTR9-205ENST00000529898 MEN1O00255 615 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
CTR9-205ENST00000529898 IL2RAP01589 272 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 FLIIQ13045 1269 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 TMEM132AQ24JP5 1023 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 MAP7D1Q3KQU3 841 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 SLFNL1Q499Z3 407 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 PRICKLE2Q7Z3G6 844 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
CTR9-205ENST00000529898 FAM181BA6NEQ2 426 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 SV2AQ7L0J3 742 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 VWA5B2Q8N398 1253 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 NLRP3Q96P20 1036 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
CTR9-205ENST00000529898 ALG2Q9H553 416 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 ARHGEF10LQ9HCE6 1279 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 DYRK1BQ9Y463 629 aa7.26□□□□□ -1.25
CTR9-205ENST00000529898 NBPF10Q6P3W6 841 aaKnown RBP7.25□□□□□ -1.25
CTR9-205ENST00000529898 NBPF15Q8N660 670 aa7.25□□□□□ -1.25
CTR9-205ENST00000529898 CNKSR1Q969H4 720 aa7.25□□□□□ -1.25
CTR9-205ENST00000529898 SIRT1Q96EB6 747 aa7.25□□□□□ -1.25
CTR9-205ENST00000529898 COL25A1Q9BXS0 654 aaPredicted RBP7.25□□□□□ -1.25
CTR9-205ENST00000529898 FHDC1Q9C0D6 1143 aaPredicted RBP7.25□□□□□ -1.25
CTR9-205ENST00000529898 CUEDC1Q9NWM3 386 aaPredicted RBP7.25□□□□□ -1.25
CTR9-205ENST00000529898 RHOQP17081 205 aa7.24□□□□□ -1.25
CTR9-205ENST00000529898 CENPCQ03188 943 aa7.24□□□□□ -1.25
CTR9-205ENST00000529898 POU4F2Q12837 409 aa7.24□□□□□ -1.25
CTR9-205ENST00000529898 SEMA3FQ13275 785 aa7.24□□□□□ -1.25
CTR9-205ENST00000529898 RNFT1Q5M7Z0 435 aa7.24□□□□□ -1.25
CTR9-205ENST00000529898 TRIM22Q8IYM9 498 aa7.24□□□□□ -1.25
CTR9-205ENST00000529898 SLURP2P0DP57 97 aa7.23□□□□□ -1.25
CTR9-205ENST00000529898 ESCO1Q5FWF5 840 aa7.23□□□□□ -1.25
CTR9-205ENST00000529898 SLC27A3Q5K4L6 730 aa7.23□□□□□ -1.25
CTR9-205ENST00000529898 PLPP7Q8NBV4 271 aa7.23□□□□□ -1.25
CTR9-205ENST00000529898 NFATC2IPQ8NCF5 419 aa7.23□□□□□ -1.25
CTR9-205ENST00000529898 POM121Q96HA1 1249 aa7.23□□□□□ -1.25
CTR9-205ENST00000529898 WASLO00401 505 aaPredicted RBP7.22□□□□□ -1.25
CTR9-205ENST00000529898 LZTS3O60299 673 aaPredicted RBP7.22□□□□□ -1.25
CTR9-205ENST00000529898 TAS1R3Q7RTX0 852 aa7.22□□□□□ -1.25
CTR9-205ENST00000529898 CNTNAP3BQ96NU0 1288 aa7.22□□□□□ -1.25
CTR9-205ENST00000529898 CNTNAP3Q9BZ76 1288 aa7.22□□□□□ -1.25
CTR9-205ENST00000529898 ETNK1Q9HBU6 452 aa7.22□□□□□ -1.25
CTR9-205ENST00000529898 SCNN1DP51172 638 aa7.21□□□□□ -1.26
CTR9-205ENST00000529898 DBN1Q16643 649 aa7.21□□□□□ -1.26
CTR9-205ENST00000529898 ZNF837Q96EG3 531 aaPredicted RBP7.21□□□□□ -1.26
CTR9-205ENST00000529898 RAB6BQ9NRW1 208 aa7.21□□□□□ -1.26
CTR9-205ENST00000529898 CDC14CA4D256 554 aa7.2□□□□□ -1.26
CTR9-205ENST00000529898 GAS6Q14393 721 aa7.2□□□□□ -1.26
CTR9-205ENST00000529898 PPARGC1BQ86YN6 1023 aaKnown RBP7.2□□□□□ -1.26
CTR9-205ENST00000529898 WWC1Q8IX03 1113 aa7.2□□□□□ -1.26
CTR9-205ENST00000529898 ZSCAN10Q96SZ4 725 aaPredicted RBP7.2□□□□□ -1.26
CTR9-205ENST00000529898 H7C1W4 665 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 RAD21O60216 631 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 F11P03951 625 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 INHAP05111 366 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 OXLD1Q5BKU9 147 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 SLC4A9Q96Q91 983 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 TIMMDC1Q9NPL8 285 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 PCDHGA11Q9Y5H2 935 aa7.19□□□□□ -1.26
CTR9-205ENST00000529898 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
CTR9-205ENST00000529898 UBTFP17480 764 aaKnown RBP7.18□□□□□ -1.26
CTR9-205ENST00000529898 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
CTR9-205ENST00000529898 A0A1B0GTH6 734 aa7.17□□□□□ -1.26
CTR9-205ENST00000529898 LBRQ14739 615 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms