RNA–Protein interactions for RNA: ENST00000529878.1

SCN4B-204, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4 BASIC

Gene SCN4B, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-204ENST00000529878 IL2RBP14784 551 aa21.66■■□□□ 1.06
SCN4B-204ENST00000529878 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
SCN4B-204ENST00000529878 KIF24Q5T7B8 1368 aa21.65■■□□□ 1.06
SCN4B-204ENST00000529878 FHDC1Q9C0D6 1143 aaPredicted RBP21.64■■□□□ 1.05
SCN4B-204ENST00000529878 EMILIN1Q9Y6C2 1016 aa21.64■■□□□ 1.05
SCN4B-204ENST00000529878 HSP90AB2PQ58FF8 381 aa21.63■■□□□ 1.05
SCN4B-204ENST00000529878 USHBP1Q8N6Y0 703 aa21.63■■□□□ 1.05
SCN4B-204ENST00000529878 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
SCN4B-204ENST00000529878 TNNT2P45379 298 aaPredicted RBP21.62■■□□□ 1.05
SCN4B-204ENST00000529878 FLT4P35916 1363 aa21.61■■□□□ 1.05
SCN4B-204ENST00000529878 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
SCN4B-204ENST00000529878 SGIP1Q9BQI5 828 aa21.61■■□□□ 1.05
SCN4B-204ENST00000529878 SMG6Q86US8 1419 aaKnown RBP21.61■■□□□ 1.05
SCN4B-204ENST00000529878 WASHC2AQ641Q2 1341 aa21.6■■□□□ 1.05
SCN4B-204ENST00000529878 ZNF784Q8NCA9 323 aaPredicted RBP21.6■■□□□ 1.05
SCN4B-204ENST00000529878 ARXQ96QS3 562 aa21.6■■□□□ 1.05
SCN4B-204ENST00000529878 MEGF6O75095 1541 aa21.6■■□□□ 1.05
SCN4B-204ENST00000529878 NBPF6Q5VWK0 638 aa21.59■■□□□ 1.05
SCN4B-204ENST00000529878 NBPF4Q96M43 638 aa21.59■■□□□ 1.05
SCN4B-204ENST00000529878 KNSTRNQ9Y448 316 aa21.59■■□□□ 1.05
SCN4B-204ENST00000529878 INSRP06213 1382 aa21.59■■□□□ 1.05
SCN4B-204ENST00000529878 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
SCN4B-204ENST00000529878 NHSQ6T4R5 1651 aa21.56■■□□□ 1.04
SCN4B-204ENST00000529878 UTRNP46939 3433 aa21.55■■□□□ 1.04
SCN4B-204ENST00000529878 SLC16A10Q8TF71 515 aa21.55■■□□□ 1.04
SCN4B-204ENST00000529878 KAT6BQ8WYB5 2073 aa21.54■■□□□ 1.04
SCN4B-204ENST00000529878 SHANK3Q9BYB0 1731 aa21.54■■□□□ 1.04
SCN4B-204ENST00000529878 AMER1Q5JTC6 1135 aaPredicted RBP21.53■■□□□ 1.04
SCN4B-204ENST00000529878 SLC27A3Q5K4L6 730 aa21.53■■□□□ 1.04
SCN4B-204ENST00000529878 POLKQ9UBT6 870 aa21.53■■□□□ 1.04
SCN4B-204ENST00000529878 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
SCN4B-204ENST00000529878 LRRC4BQ9NT99 713 aa21.52■■□□□ 1.04
SCN4B-204ENST00000529878 MAP3K5Q99683 1374 aa21.51■■□□□ 1.03
SCN4B-204ENST00000529878 NPC1L1Q9UHC9 1359 aa21.51■■□□□ 1.03
SCN4B-204ENST00000529878 ZCRB1Q8TBF4 217 aaKnown RBP21.5■■□□□ 1.03
SCN4B-204ENST00000529878 RAPGEF4Q8WZA2 1011 aa21.5■■□□□ 1.03
SCN4B-204ENST00000529878 ZEB1P37275 1124 aaPredicted RBP21.49■■□□□ 1.03
SCN4B-204ENST00000529878 GPR162Q16538 588 aa21.49■■□□□ 1.03
SCN4B-204ENST00000529878 ZNF827Q17R98 1081 aa21.49■■□□□ 1.03
SCN4B-204ENST00000529878 MORC1Q86VD1 984 aa21.49■■□□□ 1.03
SCN4B-204ENST00000529878 AKT1S1Q96B36 256 aa21.49■■□□□ 1.03
SCN4B-204ENST00000529878 DOT1LQ8TEK3 1739 aa21.49■■□□□ 1.03
SCN4B-204ENST00000529878 BTAF1O14981 1849 aa21.48■■□□□ 1.03
SCN4B-204ENST00000529878 POLD1P28340 1107 aa21.48■■□□□ 1.03
SCN4B-204ENST00000529878 CHD4Q14839 1912 aa21.47■■□□□ 1.03
SCN4B-204ENST00000529878 TATP17735 454 aaPredicted RBP21.47■■□□□ 1.03
SCN4B-204ENST00000529878 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
SCN4B-204ENST00000529878 SYTL4Q96C24 671 aaPredicted RBP21.46■■□□□ 1.03
SCN4B-204ENST00000529878 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
SCN4B-204ENST00000529878 EIF4A2Q14240 407 aaKnown RBP21.45■■□□□ 1.02
SCN4B-204ENST00000529878 EYA1Q99502 592 aa21.45■■□□□ 1.02
SCN4B-204ENST00000529878 TFCP2L1Q9NZI6 479 aa21.45■■□□□ 1.02
SCN4B-204ENST00000529878 CNGB1Q14028 1251 aaPredicted RBP21.44■■□□□ 1.02
SCN4B-204ENST00000529878 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
SCN4B-204ENST00000529878 PAPPAQ13219 1627 aa21.43■■□□□ 1.02
SCN4B-204ENST00000529878 PKD1L3Q7Z443 1732 aa21.43■■□□□ 1.02
SCN4B-204ENST00000529878 PNPLA7Q6ZV29 1317 aa21.41■■□□□ 1.02
SCN4B-204ENST00000529878 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
SCN4B-204ENST00000529878 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
SCN4B-204ENST00000529878 CC2D1BQ5T0F9 858 aaKnown RBP21.41■■□□□ 1.02
SCN4B-204ENST00000529878 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
SCN4B-204ENST00000529878 KLHL34Q8N239 644 aa21.4■■□□□ 1.02
SCN4B-204ENST00000529878 HMGB2P26583 209 aaKnown RBP21.39■■□□□ 1.01
SCN4B-204ENST00000529878 CYP27B1O15528 508 aa21.38■■□□□ 1.01
SCN4B-204ENST00000529878 PLEKHG2Q9H7P9 1386 aa21.37■■□□□ 1.01
SCN4B-204ENST00000529878 KCNQ4P56696 695 aa21.37■■□□□ 1.01
SCN4B-204ENST00000529878 TOGARAM1Q9Y4F4 1720 aa21.37■■□□□ 1.01
SCN4B-204ENST00000529878 GRIN3BO60391 1043 aa21.36■■□□□ 1.01
SCN4B-204ENST00000529878 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
SCN4B-204ENST00000529878 IGSF1Q8N6C5 1336 aa21.35■■□□□ 1.01
SCN4B-204ENST00000529878 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
SCN4B-204ENST00000529878 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
SCN4B-204ENST00000529878 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
SCN4B-204ENST00000529878 GIGYF1O75420 1035 aaPredicted RBP21.33■■□□□ 1.01
SCN4B-204ENST00000529878 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1.01
SCN4B-204ENST00000529878 MSH5O43196 834 aa21.32■■□□□ 1
SCN4B-204ENST00000529878 MTHFSP49914 203 aa21.32■■□□□ 1
SCN4B-204ENST00000529878 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
SCN4B-204ENST00000529878 GOLGB1Q14789 3259 aaKnown RBP21.31■■□□□ 1
SCN4B-204ENST00000529878 MPRIPQ6WCQ1 1025 aa21.31■■□□□ 1
SCN4B-204ENST00000529878 COL23A1Q86Y22 540 aaPredicted RBP21.31■■□□□ 1
SCN4B-204ENST00000529878 LY75O60449 1722 aa21.3■■□□□ 1
SCN4B-204ENST00000529878 COL24A1Q17RW2 1714 aa21.3■■□□□ 1
SCN4B-204ENST00000529878 ITGB4P16144 1822 aa21.29■■□□□ 1
SCN4B-204ENST00000529878 FLAD1Q8NFF5 587 aa21.29■■□□□ 1
SCN4B-204ENST00000529878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 1
SCN4B-204ENST00000529878 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
SCN4B-204ENST00000529878 PHKG2P15735 406 aa21.28■■□□□ 1
SCN4B-204ENST00000529878 IL13P35225 146 aa21.28■■□□□ 1
SCN4B-204ENST00000529878 KDRP35968 1356 aa21.27■■□□□ 1
SCN4B-204ENST00000529878 SULT6B1Q6IMI4 303 aa21.27■■□□□ 1
SCN4B-204ENST00000529878 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
SCN4B-204ENST00000529878 CD2APQ9Y5K6 639 aa21.26■□□□□ 0.99
SCN4B-204ENST00000529878 PALLDQ8WX93 1383 aa21.25■□□□□ 0.99
SCN4B-204ENST00000529878 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
SCN4B-204ENST00000529878 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
SCN4B-204ENST00000529878 DIAPH1O60610 1272 aaKnown RBP21.24■□□□□ 0.99
SCN4B-204ENST00000529878 PIGBQ92521 554 aa21.24■□□□□ 0.99
SCN4B-204ENST00000529878 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
SCN4B-204ENST00000529878 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms