RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
NUP98-216ENST00000529379 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
NUP98-216ENST00000529379 PKDCCQ504Y2 493 aa9.54□□□□□ -0.88
NUP98-216ENST00000529379 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
NUP98-216ENST00000529379 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
NUP98-216ENST00000529379 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
NUP98-216ENST00000529379 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
NUP98-216ENST00000529379 OSBPL3Q9H4L5 887 aa9.53□□□□□ -0.88
NUP98-216ENST00000529379 ST8SIA5O15466 376 aa9.52□□□□□ -0.89
NUP98-216ENST00000529379 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
NUP98-216ENST00000529379 AVPP01185 164 aa9.52□□□□□ -0.89
NUP98-216ENST00000529379 CLDN10P78369 228 aa9.52□□□□□ -0.89
NUP98-216ENST00000529379 CBLBQ13191 982 aa9.52□□□□□ -0.89
NUP98-216ENST00000529379 PCDHGA11Q9Y5H2 935 aa9.52□□□□□ -0.89
NUP98-216ENST00000529379 GTF2IP78347 998 aa9.51□□□□□ -0.89
NUP98-216ENST00000529379 CRTC2Q53ET0 693 aaPredicted RBP9.51□□□□□ -0.89
NUP98-216ENST00000529379 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
NUP98-216ENST00000529379 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
NUP98-216ENST00000529379 RASA1P20936 1047 aa9.5□□□□□ -0.89
NUP98-216ENST00000529379 Q6ZVU0 165 aa9.5□□□□□ -0.89
NUP98-216ENST00000529379 TRIM50Q86XT4 487 aa9.5□□□□□ -0.89
NUP98-216ENST00000529379 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
NUP98-216ENST00000529379 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
NUP98-216ENST00000529379 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
NUP98-216ENST00000529379 FAM196BA6NMK8 535 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L21D6R901 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 ATG7O95352 703 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 PTK7Q13308 1070 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
NUP98-216ENST00000529379 ESF1Q9H501 851 aaKnown RBP9.49□□□□□ -0.89
NUP98-216ENST00000529379 DNAAF2Q9NVR5 837 aaKnown RBP9.49□□□□□ -0.89
NUP98-216ENST00000529379 POTECB2RU33 542 aa9.48□□□□□ -0.89
NUP98-216ENST00000529379 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
NUP98-216ENST00000529379 LARP1Q6PKG0 1096 aaKnown RBP9.48□□□□□ -0.89
NUP98-216ENST00000529379 KDF1Q8NAX2 398 aaPredicted RBP9.48□□□□□ -0.89
NUP98-216ENST00000529379 CAPN5O15484 640 aaPredicted RBP9.47□□□□□ -0.89
NUP98-216ENST00000529379 DKK1O94907 266 aa9.47□□□□□ -0.89
NUP98-216ENST00000529379 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
NUP98-216ENST00000529379 ADH1AP07327 375 aa9.47□□□□□ -0.89
NUP98-216ENST00000529379 CRIPAKQ8N1N5 446 aa9.47□□□□□ -0.89
NUP98-216ENST00000529379 ZNF594Q96JF6 807 aaPredicted RBP9.47□□□□□ -0.89
NUP98-216ENST00000529379 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.9
NUP98-216ENST00000529379 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
NUP98-216ENST00000529379 MEIOBQ8N635 442 aa9.46□□□□□ -0.9
NUP98-216ENST00000529379 AGBL1Q96MI9 1066 aa9.46□□□□□ -0.9
NUP98-216ENST00000529379 ZMIZ1Q9ULJ6 1067 aa9.46□□□□□ -0.9
NUP98-216ENST00000529379 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
NUP98-216ENST00000529379 PSME1Q06323 249 aa9.45□□□□□ -0.9
NUP98-216ENST00000529379 ELOAQ14241 798 aaKnown RBP9.45□□□□□ -0.9
NUP98-216ENST00000529379 CCDC102BQ68D86 513 aa9.45□□□□□ -0.9
NUP98-216ENST00000529379 SIX5Q8N196 739 aa9.45□□□□□ -0.9
NUP98-216ENST00000529379 ARXQ96QS3 562 aa9.45□□□□□ -0.9
NUP98-216ENST00000529379 NOVA2Q9UNW9 492 aaKnown RBP9.45□□□□□ -0.9
NUP98-216ENST00000529379 TMEM229AB2RXF0 380 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
NUP98-216ENST00000529379 SCNN1DP51172 638 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 DPYDQ12882 1025 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 ANKMY2Q8IV38 441 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 RAB6BQ9NRW1 208 aa9.44□□□□□ -0.9
NUP98-216ENST00000529379 GNRH1P01148 92 aa9.43□□□□□ -0.9
NUP98-216ENST00000529379 PTGIRP43119 386 aa9.43□□□□□ -0.9
NUP98-216ENST00000529379 RELBQ01201 579 aa9.43□□□□□ -0.9
NUP98-216ENST00000529379 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
NUP98-216ENST00000529379 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
NUP98-216ENST00000529379 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
NUP98-216ENST00000529379 GDF10P55107 478 aa9.42□□□□□ -0.9
NUP98-216ENST00000529379 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP98-216ENST00000529379 STK32AQ8WU08 396 aa9.42□□□□□ -0.9
NUP98-216ENST00000529379 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
NUP98-216ENST00000529379 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
NUP98-216ENST00000529379 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
NUP98-216ENST00000529379 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
NUP98-216ENST00000529379 CARNS1A5YM72 827 aa9.4□□□□□ -0.9
NUP98-216ENST00000529379 IL2RAP01589 272 aa9.4□□□□□ -0.9
NUP98-216ENST00000529379 INHAP05111 366 aa9.4□□□□□ -0.9
NUP98-216ENST00000529379 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
NUP98-216ENST00000529379 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
NUP98-216ENST00000529379 ZNF358Q9NW07 568 aa9.4□□□□□ -0.9
NUP98-216ENST00000529379 TMEM88BA6NKF7 163 aa9.39□□□□□ -0.91
NUP98-216ENST00000529379 WASLO00401 505 aaPredicted RBP9.39□□□□□ -0.91
NUP98-216ENST00000529379 AXIN1O15169 862 aa9.39□□□□□ -0.91
NUP98-216ENST00000529379 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
NUP98-216ENST00000529379 BMP1P13497 986 aa9.39□□□□□ -0.91
NUP98-216ENST00000529379 SEC13P55735 322 aa9.39□□□□□ -0.91
NUP98-216ENST00000529379 MRPL14Q6P1L8 145 aaKnown RBP9.39□□□□□ -0.91
NUP98-216ENST00000529379 XAGE2Q96GT9 111 aa9.39□□□□□ -0.91
NUP98-216ENST00000529379 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms