RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.82□□□□□ -0.686e-7■□□□□ 11.2
PABPC4-223ENST00000529216 NFE2L2Q16236 605 aa10.81□□□□□ -0.68
PABPC4-223ENST00000529216 BARGINQ6ZT62 677 aa10.81□□□□□ -0.68
PABPC4-223ENST00000529216 GAS2L2Q8NHY3 880 aa10.81□□□□□ -0.68
PABPC4-223ENST00000529216 CDCA7Q9BWT1 371 aaPredicted RBP10.81□□□□□ -0.68
PABPC4-223ENST00000529216 TRPC5Q9UL62 973 aaPredicted RBP10.81□□□□□ -0.68
PABPC4-223ENST00000529216 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
PABPC4-223ENST00000529216 RGPD2P0DJD1 1756 aa10.8□□□□□ -0.68
PABPC4-223ENST00000529216 TMPOP42166 694 aaKnown RBP10.8□□□□□ -0.68
PABPC4-223ENST00000529216 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
PABPC4-223ENST00000529216 MTHFSDQ2M296 383 aaKnown RBP10.8□□□□□ -0.68
PABPC4-223ENST00000529216 PLEKHO1Q53GL0 409 aaPredicted RBP10.8□□□□□ -0.68
PABPC4-223ENST00000529216 ZNF772Q68DY9 489 aaPredicted RBP10.8□□□□□ -0.68
PABPC4-223ENST00000529216 USP35Q9P2H5 1018 aa10.8□□□□□ -0.68
PABPC4-223ENST00000529216 CCDC9Q9Y3X0 531 aaKnown RBP10.8□□□□□ -0.68
PABPC4-223ENST00000529216 ZBED9Q6R2W3 1325 aa10.8□□□□□ -0.68
PABPC4-223ENST00000529216 PKD1L3Q7Z443 1732 aa10.79□□□□□ -0.68
PABPC4-223ENST00000529216 TNS2Q63HR2 1409 aa10.79□□□□□ -0.68
PABPC4-223ENST00000529216 LMOD3Q0VAK6 560 aa10.79□□□□□ -0.68
PABPC4-223ENST00000529216 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
PABPC4-223ENST00000529216 YTHDC1Q96MU7 727 aaKnown RBP10.79□□□□□ -0.68
PABPC4-223ENST00000529216 SPG7Q9UQ90 795 aa10.79□□□□□ -0.68
PABPC4-223ENST00000529216 MAP3K5Q99683 1374 aa10.78□□□□□ -0.68
PABPC4-223ENST00000529216 GLI3P10071 1580 aa10.78□□□□□ -0.68
PABPC4-223ENST00000529216 RIPK4P57078 832 aa10.78□□□□□ -0.68
PABPC4-223ENST00000529216 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
PABPC4-223ENST00000529216 ZNF521Q96K83 1311 aa10.78□□□□□ -0.68
PABPC4-223ENST00000529216 PCDH11XQ9BZA7 1347 aa10.78□□□□□ -0.68
PABPC4-223ENST00000529216 PCDH11YQ9BZA8 1340 aa10.78□□□□□ -0.68
PABPC4-223ENST00000529216 WNK3Q9BYP7 1800 aa10.77□□□□□ -0.68
PABPC4-223ENST00000529216 THSD7AQ9UPZ6 1657 aa10.77□□□□□ -0.69
PABPC4-223ENST00000529216 HTATSF1O43719 755 aaKnown RBP10.77□□□□□ -0.69
PABPC4-223ENST00000529216 AKAP4Q5JQC9 854 aa10.77□□□□□ -0.69
PABPC4-223ENST00000529216 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
PABPC4-223ENST00000529216 ZCRB1Q8TBF4 217 aaKnown RBP10.77□□□□□ -0.69
PABPC4-223ENST00000529216 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
PABPC4-223ENST00000529216 LRRC37A3O60309 1634 aa10.76□□□□□ -0.69
PABPC4-223ENST00000529216 GNAT3A8MTJ3 354 aa10.76□□□□□ -0.69
PABPC4-223ENST00000529216 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
PABPC4-223ENST00000529216 C1orf141Q5JVX7 400 aa10.76□□□□□ -0.69
PABPC4-223ENST00000529216 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
PABPC4-223ENST00000529216 QTRT2Q9H974 415 aaKnown RBP10.76□□□□□ -0.69
PABPC4-223ENST00000529216 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
PABPC4-223ENST00000529216 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
PABPC4-223ENST00000529216 PHKG2P15735 406 aa10.75□□□□□ -0.69
PABPC4-223ENST00000529216 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
PABPC4-223ENST00000529216 IFNL2Q8IZJ0 200 aa10.75□□□□□ -0.69
PABPC4-223ENST00000529216 CEMIPQ8WUJ3 1361 aa10.75□□□□□ -0.69
PABPC4-223ENST00000529216 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 EXOC5O00471 708 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 CYP27B1O15528 508 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 HSP90AB1P08238 724 aaKnown RBP10.74□□□□□ -0.69
PABPC4-223ENST00000529216 CALD1Q05682 793 aaKnown RBP10.74□□□□□ -0.69
PABPC4-223ENST00000529216 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 DDB1Q16531 1140 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 WDR63Q8IWG1 891 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 RTF1Q92541 710 aaKnown RBP10.74□□□□□ -0.69
PABPC4-223ENST00000529216 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
PABPC4-223ENST00000529216 IL16Q14005 1332 aa10.74□□□□□ -0.69
PABPC4-223ENST00000529216 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
PABPC4-223ENST00000529216 RBM6P78332 1123 aaKnown RBP10.73□□□□□ -0.69
PABPC4-223ENST00000529216 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
PABPC4-223ENST00000529216 DCAF5Q96JK2 942 aa10.73□□□□□ -0.69
PABPC4-223ENST00000529216 KDM6AO15550 1401 aaPredicted RBP10.73□□□□□ -0.69
PABPC4-223ENST00000529216 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
PABPC4-223ENST00000529216 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
PABPC4-223ENST00000529216 RGS17Q9UGC6 210 aaPredicted RBP10.72□□□□□ -0.69
PABPC4-223ENST00000529216 MRC1P22897 1456 aa10.72□□□□□ -0.69
PABPC4-223ENST00000529216 E9PSI1 815 aa10.71□□□□□ -0.69
PABPC4-223ENST00000529216 RNMTO43148 476 aaKnown RBP10.71□□□□□ -0.69
PABPC4-223ENST00000529216 MCM10Q7L590 875 aa10.71□□□□□ -0.69
PABPC4-223ENST00000529216 IL17REQ8NFR9 667 aa10.71□□□□□ -0.69
PABPC4-223ENST00000529216 DDX54Q8TDD1 881 aaKnown RBP10.71□□□□□ -0.69
PABPC4-223ENST00000529216 BCL9O00512 1426 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 A0A0G2JS52 829 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 RXRBP28702 533 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 MYT1Q01538 1121 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 MPRIPQ6WCQ1 1025 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 THUMPD2Q9BTF0 503 aaKnown RBP10.7□□□□□ -0.7
PABPC4-223ENST00000529216 IFT57Q9NWB7 429 aa10.7□□□□□ -0.7
PABPC4-223ENST00000529216 ERVV-2B6SEH9 535 aa10.69□□□□□ -0.7
PABPC4-223ENST00000529216 GNAI1P63096 354 aa10.69□□□□□ -0.7
PABPC4-223ENST00000529216 MARCH10Q8NA82 808 aaPredicted RBP10.69□□□□□ -0.7
PABPC4-223ENST00000529216 CFAP44Q96MT7 982 aa10.69□□□□□ -0.7
PABPC4-223ENST00000529216 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
PABPC4-223ENST00000529216 LGR6Q9HBX8 967 aa10.69□□□□□ -0.7
PABPC4-223ENST00000529216 BABAM1Q9NWV8 329 aa10.69□□□□□ -0.7
PABPC4-223ENST00000529216 RGS12O14924 1447 aa10.68□□□□□ -0.7
PABPC4-223ENST00000529216 ZNF853P0CG23 659 aa10.68□□□□□ -0.7
PABPC4-223ENST00000529216 SLFN5Q08AF3 891 aa10.68□□□□□ -0.7
PABPC4-223ENST00000529216 TEFQ10587 303 aa10.68□□□□□ -0.7
PABPC4-223ENST00000529216 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
PABPC4-223ENST00000529216 TRMT2AQ8IZ69 625 aaKnown RBP10.68□□□□□ -0.7
PABPC4-223ENST00000529216 SLC52A2Q9HAB3 445 aa10.68□□□□□ -0.7
PABPC4-223ENST00000529216 DLG5Q8TDM6 1919 aa10.67□□□□□ -0.7
PABPC4-223ENST00000529216 CHL1O00533 1208 aa10.67□□□□□ -0.7
PABPC4-223ENST00000529216 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
PABPC4-223ENST00000529216 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms