RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 ARXQ96QS3 562 aa20.84■□□□□ 0.93
PUF60-212ENST00000528320 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
PUF60-212ENST00000528320 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.93
PUF60-212ENST00000528320 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
PUF60-212ENST00000528320 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
PUF60-212ENST00000528320 ZNF827Q17R98 1081 aa20.82■□□□□ 0.92
PUF60-212ENST00000528320 SLC27A3Q5K4L6 730 aa20.82■□□□□ 0.92
PUF60-212ENST00000528320 PANK3Q9H999 370 aa20.82■□□□□ 0.92
PUF60-212ENST00000528320 BTAF1O14981 1849 aa20.82■□□□□ 0.92
PUF60-212ENST00000528320 PAPPAQ13219 1627 aa20.82■□□□□ 0.92
PUF60-212ENST00000528320 AMPHP49418 695 aa20.81■□□□□ 0.92
PUF60-212ENST00000528320 LTV1Q96GA3 475 aaPredicted RBP20.81■□□□□ 0.92
PUF60-212ENST00000528320 INSRP06213 1382 aa20.81■□□□□ 0.92
PUF60-212ENST00000528320 SLC16A10Q8TF71 515 aa20.8■□□□□ 0.92
PUF60-212ENST00000528320 AKT1S1Q96B36 256 aa20.8■□□□□ 0.92
PUF60-212ENST00000528320 HSP90AB2PQ58FF8 381 aa20.79■□□□□ 0.92
PUF60-212ENST00000528320 MAP3K5Q99683 1374 aa20.79■□□□□ 0.92
PUF60-212ENST00000528320 FAM208AQ9UK61 1670 aaKnown RBP20.79■□□□□ 0.92
PUF60-212ENST00000528320 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
PUF60-212ENST00000528320 NBPF6Q5VWK0 638 aa20.78■□□□□ 0.92
PUF60-212ENST00000528320 ZNF784Q8NCA9 323 aaPredicted RBP20.78■□□□□ 0.92
PUF60-212ENST00000528320 NBPF4Q96M43 638 aa20.78■□□□□ 0.92
PUF60-212ENST00000528320 FLT4P35916 1363 aa20.77■□□□□ 0.92
PUF60-212ENST00000528320 EMILIN1Q9Y6C2 1016 aa20.77■□□□□ 0.92
PUF60-212ENST00000528320 PRIM1P49642 420 aaKnown RBP20.76■□□□□ 0.91
PUF60-212ENST00000528320 ZCRB1Q8TBF4 217 aaKnown RBP20.76■□□□□ 0.91
PUF60-212ENST00000528320 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
PUF60-212ENST00000528320 WASHC2AQ641Q2 1341 aa20.76■□□□□ 0.91
PUF60-212ENST00000528320 ANKRD26Q9UPS8 1709 aa20.75■□□□□ 0.91
PUF60-212ENST00000528320 SYTL4Q96C24 671 aaPredicted RBP20.75■□□□□ 0.91
PUF60-212ENST00000528320 NCAPD2Q15021 1401 aa20.75■□□□□ 0.91
PUF60-212ENST00000528320 PER1O15534 1290 aaPredicted RBP20.74■□□□□ 0.91
PUF60-212ENST00000528320 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
PUF60-212ENST00000528320 RGPD2P0DJD1 1756 aa20.73■□□□□ 0.91
PUF60-212ENST00000528320 TFCP2L1Q9NZI6 479 aa20.73■□□□□ 0.91
PUF60-212ENST00000528320 PNPLA7Q6ZV29 1317 aa20.73■□□□□ 0.91
PUF60-212ENST00000528320 NSD2O96028 1365 aa20.72■□□□□ 0.91
PUF60-212ENST00000528320 POLD1P28340 1107 aa20.72■□□□□ 0.91
PUF60-212ENST00000528320 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
PUF60-212ENST00000528320 KCNQ4P56696 695 aa20.71■□□□□ 0.91
PUF60-212ENST00000528320 MEGF6O75095 1541 aa20.71■□□□□ 0.91
PUF60-212ENST00000528320 CHD4Q14839 1912 aa20.7■□□□□ 0.91
PUF60-212ENST00000528320 MAP2P11137 1827 aaKnown RBP20.7■□□□□ 0.9
PUF60-212ENST00000528320 GPR162Q16538 588 aa20.69■□□□□ 0.9
PUF60-212ENST00000528320 QSER1Q2KHR3 1735 aa20.69■□□□□ 0.9
PUF60-212ENST00000528320 GOLGB1Q14789 3259 aaKnown RBP20.69■□□□□ 0.9
PUF60-212ENST00000528320 SMG6Q86US8 1419 aaKnown RBP20.69■□□□□ 0.9
PUF60-212ENST00000528320 CCNL1Q9UK58 526 aaPredicted RBP20.68■□□□□ 0.9
PUF60-212ENST00000528320 RAPGEF4Q8WZA2 1011 aa20.67■□□□□ 0.9
PUF60-212ENST00000528320 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
PUF60-212ENST00000528320 LY75O60449 1722 aa20.65■□□□□ 0.9
PUF60-212ENST00000528320 COL24A1Q17RW2 1714 aa20.65■□□□□ 0.9
PUF60-212ENST00000528320 KLHL34Q8N239 644 aa20.65■□□□□ 0.9
PUF60-212ENST00000528320 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
PUF60-212ENST00000528320 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
PUF60-212ENST00000528320 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
PUF60-212ENST00000528320 HMGB2P26583 209 aaKnown RBP20.64■□□□□ 0.89
PUF60-212ENST00000528320 EYA1Q99502 592 aa20.64■□□□□ 0.89
PUF60-212ENST00000528320 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.89
PUF60-212ENST00000528320 EIF4A2Q14240 407 aaKnown RBP20.62■□□□□ 0.89
PUF60-212ENST00000528320 COL23A1Q86Y22 540 aaPredicted RBP20.62■□□□□ 0.89
PUF60-212ENST00000528320 NPC1L1Q9UHC9 1359 aa20.61■□□□□ 0.89
PUF60-212ENST00000528320 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
PUF60-212ENST00000528320 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
PUF60-212ENST00000528320 TUBGCP6Q96RT7 1819 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 PCDH11XQ9BZA7 1347 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 PCDH11YQ9BZA8 1340 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 MSH5O43196 834 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 C1QTNF8P60827 252 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 MORC1Q86VD1 984 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
PUF60-212ENST00000528320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.6■□□□□ 0.89
PUF60-212ENST00000528320 PLEKHG2Q9H7P9 1386 aa20.59■□□□□ 0.89
PUF60-212ENST00000528320 CYP27B1O15528 508 aa20.59■□□□□ 0.89
PUF60-212ENST00000528320 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
PUF60-212ENST00000528320 IGSF1Q8N6C5 1336 aa20.58■□□□□ 0.89
PUF60-212ENST00000528320 FLAD1Q8NFF5 587 aa20.58■□□□□ 0.89
PUF60-212ENST00000528320 GRIN3BO60391 1043 aa20.57■□□□□ 0.88
PUF60-212ENST00000528320 NKX1-1Q15270 411 aaPredicted RBP20.57■□□□□ 0.88
PUF60-212ENST00000528320 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
PUF60-212ENST00000528320 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
PUF60-212ENST00000528320 SENP3-EIF4A1A0A087X0R7 540 aa20.54■□□□□ 0.88
PUF60-212ENST00000528320 SMARCC1Q92922 1105 aaPredicted RBP20.54■□□□□ 0.88
PUF60-212ENST00000528320 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
PUF60-212ENST00000528320 YBX3P16989 372 aaKnown RBP eCLIP20.53■□□□□ 0.883e-9■■■□□ 14.8
PUF60-212ENST00000528320 IL13P35225 146 aa20.53■□□□□ 0.88
PUF60-212ENST00000528320 CD2APQ9Y5K6 639 aa20.53■□□□□ 0.88
PUF60-212ENST00000528320 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
PUF60-212ENST00000528320 MSL1Q68DK7 614 aa20.52■□□□□ 0.88
PUF60-212ENST00000528320 KDRP35968 1356 aa20.51■□□□□ 0.87
PUF60-212ENST00000528320 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
PUF60-212ENST00000528320 MTHFSP49914 203 aa20.5■□□□□ 0.87
PUF60-212ENST00000528320 SPG7Q9UQ90 795 aa20.5■□□□□ 0.87
PUF60-212ENST00000528320 C5P01031 1676 aa20.49■□□□□ 0.87
PUF60-212ENST00000528320 MIER1Q8N108 512 aa20.49■□□□□ 0.87
PUF60-212ENST00000528320 PIGBQ92521 554 aa20.49■□□□□ 0.87
PUF60-212ENST00000528320 AK7Q96M32 723 aa20.48■□□□□ 0.87
PUF60-212ENST00000528320 PHKG2P15735 406 aa20.47■□□□□ 0.87
PUF60-212ENST00000528320 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
PUF60-212ENST00000528320 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms