RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 ZNF530Q6P9A1 599 aaPredicted RBP20.75■□□□□ 0.91
CAPRIN1-204ENST00000526494 UNC5CLQ8IV45 518 aa20.75■□□□□ 0.91
CAPRIN1-204ENST00000526494 SPG7Q9UQ90 795 aa20.75■□□□□ 0.91
CAPRIN1-204ENST00000526494 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
CAPRIN1-204ENST00000526494 MEGF6O75095 1541 aa20.74■□□□□ 0.91
CAPRIN1-204ENST00000526494 IL2RBP14784 551 aa20.74■□□□□ 0.91
CAPRIN1-204ENST00000526494 FNBP4Q8N3X1 1017 aaPredicted RBP20.74■□□□□ 0.91
CAPRIN1-204ENST00000526494 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
CAPRIN1-204ENST00000526494 CALD1Q05682 793 aaKnown RBP20.73■□□□□ 0.91
CAPRIN1-204ENST00000526494 C1orf141Q5JVX7 400 aa20.73■□□□□ 0.91
CAPRIN1-204ENST00000526494 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
CAPRIN1-204ENST00000526494 MAP3K5Q99683 1374 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 E9PSI1 815 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.918e-8■■■□□ 15.3
CAPRIN1-204ENST00000526494 USP21Q9UK80 565 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
CAPRIN1-204ENST00000526494 HTATSF1O43719 755 aaKnown RBP20.71■□□□□ 0.91
CAPRIN1-204ENST00000526494 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
CAPRIN1-204ENST00000526494 MCM10Q7L590 875 aa20.71■□□□□ 0.91
CAPRIN1-204ENST00000526494 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 AKAP4Q5JQC9 854 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 AFF2P51816 1311 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 IL16Q14005 1332 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 SPATA31A1Q5TZJ5 1347 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
CAPRIN1-204ENST00000526494 BCL9LQ86UU0 1499 aa20.69■□□□□ 0.9
CAPRIN1-204ENST00000526494 VPS72Q15906 364 aa20.69■□□□□ 0.9
CAPRIN1-204ENST00000526494 ZCRB1Q8TBF4 217 aaKnown RBP20.69■□□□□ 0.9
CAPRIN1-204ENST00000526494 MYH16Q9H6N6 1097 aa20.68■□□□□ 0.9
CAPRIN1-204ENST00000526494 THRAP3Q9Y2W1 955 aaKnown RBP20.68■□□□□ 0.9
CAPRIN1-204ENST00000526494 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
CAPRIN1-204ENST00000526494 NRAPQ86VF7 1730 aa20.67■□□□□ 0.9
CAPRIN1-204ENST00000526494 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
CAPRIN1-204ENST00000526494 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
CAPRIN1-204ENST00000526494 CDCA7Q9BWT1 371 aaPredicted RBP20.66■□□□□ 0.9
CAPRIN1-204ENST00000526494 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
CAPRIN1-204ENST00000526494 PHKG2P15735 406 aa20.65■□□□□ 0.9
CAPRIN1-204ENST00000526494 MPRIPQ6WCQ1 1025 aa20.65■□□□□ 0.9
CAPRIN1-204ENST00000526494 TRMT2AQ8IZ69 625 aaKnown RBP20.65■□□□□ 0.9
CAPRIN1-204ENST00000526494 IL17REQ8NFR9 667 aa20.65■□□□□ 0.9
CAPRIN1-204ENST00000526494 DISP2A7MBM2 1401 aa20.64■□□□□ 0.89
CAPRIN1-204ENST00000526494 PCDH11XQ9BZA7 1347 aa20.64■□□□□ 0.89
CAPRIN1-204ENST00000526494 PCDH11YQ9BZA8 1340 aa20.64■□□□□ 0.89
CAPRIN1-204ENST00000526494 GNAI1P63096 354 aa20.64■□□□□ 0.89
CAPRIN1-204ENST00000526494 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
CAPRIN1-204ENST00000526494 CYP27B1O15528 508 aa20.63■□□□□ 0.89
CAPRIN1-204ENST00000526494 BARGINQ6ZT62 677 aa20.63■□□□□ 0.89
CAPRIN1-204ENST00000526494 DDX54Q8TDD1 881 aaKnown RBP20.63■□□□□ 0.89
CAPRIN1-204ENST00000526494 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
CAPRIN1-204ENST00000526494 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
CAPRIN1-204ENST00000526494 TSR2Q969E8 191 aaKnown RBP20.62■□□□□ 0.89
CAPRIN1-204ENST00000526494 LGR6Q9HBX8 967 aa20.62■□□□□ 0.89
CAPRIN1-204ENST00000526494 FANCIQ9NVI1 1328 aa20.61■□□□□ 0.89
CAPRIN1-204ENST00000526494 EXOC5O00471 708 aa20.61■□□□□ 0.89
CAPRIN1-204ENST00000526494 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
CAPRIN1-204ENST00000526494 TRPC5Q9UL62 973 aaPredicted RBP20.61■□□□□ 0.89
CAPRIN1-204ENST00000526494 ZNF853P0CG23 659 aa20.6■□□□□ 0.89
CAPRIN1-204ENST00000526494 TEFQ10587 303 aa20.6■□□□□ 0.89
CAPRIN1-204ENST00000526494 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
CAPRIN1-204ENST00000526494 PARP4Q9UKK3 1724 aaKnown RBP20.6■□□□□ 0.89
CAPRIN1-204ENST00000526494 DCAF5Q96JK2 942 aa20.59■□□□□ 0.89
CAPRIN1-204ENST00000526494 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
CAPRIN1-204ENST00000526494 TAF7Q15545 349 aaPredicted RBP20.58■□□□□ 0.89
CAPRIN1-204ENST00000526494 DDB1Q16531 1140 aa20.58■□□□□ 0.89
CAPRIN1-204ENST00000526494 GJD4Q96KN9 370 aaPredicted RBP20.58■□□□□ 0.89
CAPRIN1-204ENST00000526494 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
CAPRIN1-204ENST00000526494 A0A0G2JS52 829 aa20.57■□□□□ 0.88
CAPRIN1-204ENST00000526494 CHL1O00533 1208 aa20.57■□□□□ 0.88
CAPRIN1-204ENST00000526494 ATRNO75882 1429 aa20.57■□□□□ 0.88
CAPRIN1-204ENST00000526494 MYT1Q01538 1121 aa20.57■□□□□ 0.88
CAPRIN1-204ENST00000526494 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
CAPRIN1-204ENST00000526494 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
CAPRIN1-204ENST00000526494 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
CAPRIN1-204ENST00000526494 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
CAPRIN1-204ENST00000526494 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
CAPRIN1-204ENST00000526494 TNS2Q63HR2 1409 aa20.55■□□□□ 0.88
CAPRIN1-204ENST00000526494 EXOSC9Q06265 439 aaKnown RBP20.55■□□□□ 0.88
CAPRIN1-204ENST00000526494 NKX1-1Q15270 411 aaPredicted RBP20.55■□□□□ 0.88
CAPRIN1-204ENST00000526494 ZNF772Q68DY9 489 aaPredicted RBP20.54■□□□□ 0.88
CAPRIN1-204ENST00000526494 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
CAPRIN1-204ENST00000526494 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
CAPRIN1-204ENST00000526494 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.53■□□□□ 0.88
CAPRIN1-204ENST00000526494 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
CAPRIN1-204ENST00000526494 CABP4P57796 275 aa20.52■□□□□ 0.88
CAPRIN1-204ENST00000526494 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
CAPRIN1-204ENST00000526494 LRRC37A3O60309 1634 aa20.52■□□□□ 0.88
CAPRIN1-204ENST00000526494 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
CAPRIN1-204ENST00000526494 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
CAPRIN1-204ENST00000526494 NFATC2IPQ8NCF5 419 aa20.5■□□□□ 0.87
CAPRIN1-204ENST00000526494 SUPT16HQ9Y5B9 1047 aaKnown RBP20.5■□□□□ 0.87
CAPRIN1-204ENST00000526494 CT47B1P0C2W7 299 aaPredicted RBP20.49■□□□□ 0.87
CAPRIN1-204ENST00000526494 GLI3P10071 1580 aa20.48■□□□□ 0.87
CAPRIN1-204ENST00000526494 MARCH10Q8NA82 808 aaPredicted RBP20.48■□□□□ 0.87
CAPRIN1-204ENST00000526494 C8orf58Q8NAV2 365 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms