RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-205ENST00000524775 GNAI1P63096 354 aa15.26■□□□□ 0.03
CSTF3-205ENST00000524775 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
CSTF3-205ENST00000524775 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
CSTF3-205ENST00000524775 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
CSTF3-205ENST00000524775 CHL1O00533 1208 aa15.25■□□□□ 0.03
CSTF3-205ENST00000524775 CHRNA2Q15822 529 aa15.25■□□□□ 0.03
CSTF3-205ENST00000524775 MCM10Q7L590 875 aa15.25■□□□□ 0.03
CSTF3-205ENST00000524775 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
CSTF3-205ENST00000524775 EXOC6Q8TAG9 804 aa15.24■□□□□ 0.03
CSTF3-205ENST00000524775 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
CSTF3-205ENST00000524775 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
CSTF3-205ENST00000524775 IL17REQ8NFR9 667 aa15.23■□□□□ 0.03
CSTF3-205ENST00000524775 CACNA1FO60840 1977 aa15.23■□□□□ 0.03
CSTF3-205ENST00000524775 GNAT3A8MTJ3 354 aa15.22■□□□□ 0.03
CSTF3-205ENST00000524775 VAMP4O75379 141 aa15.22■□□□□ 0.03
CSTF3-205ENST00000524775 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
CSTF3-205ENST00000524775 COL14A1Q05707 1796 aaKnown RBP15.21■□□□□ 0.03
CSTF3-205ENST00000524775 TSPYL6Q8N831 410 aa15.21■□□□□ 0.03
CSTF3-205ENST00000524775 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
CSTF3-205ENST00000524775 CEMIPQ8WUJ3 1361 aa15.21■□□□□ 0.02
CSTF3-205ENST00000524775 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
CSTF3-205ENST00000524775 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
CSTF3-205ENST00000524775 C8orf58Q8NAV2 365 aa15.2■□□□□ 0.02
CSTF3-205ENST00000524775 SSH1Q8WYL5 1049 aa15.2■□□□□ 0.02
CSTF3-205ENST00000524775 MEGF6O75095 1541 aa15.2■□□□□ 0.02
CSTF3-205ENST00000524775 PLEKHG2Q9H7P9 1386 aa15.2■□□□□ 0.02
CSTF3-205ENST00000524775 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
CSTF3-205ENST00000524775 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-205ENST00000524775 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
CSTF3-205ENST00000524775 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
CSTF3-205ENST00000524775 PLEKHO1Q53GL0 409 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-205ENST00000524775 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-205ENST00000524775 ALDH1L2Q3SY69 923 aa15.18■□□□□ 0.02
CSTF3-205ENST00000524775 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
CSTF3-205ENST00000524775 PRDM11Q9NQV5 511 aa15.18■□□□□ 0.02
CSTF3-205ENST00000524775 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
CSTF3-205ENST00000524775 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 OVOS2A0A0G2JMS6 1433 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 AKAP4Q5JQC9 854 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 RTF1Q92541 710 aaKnown RBP15.17■□□□□ 0.02
CSTF3-205ENST00000524775 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 NLRP2Q9NX02 1062 aa15.17■□□□□ 0.02
CSTF3-205ENST00000524775 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
CSTF3-205ENST00000524775 TOM1O60784 492 aa15.16■□□□□ 0.02
CSTF3-205ENST00000524775 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
CSTF3-205ENST00000524775 BABAM1Q9NWV8 329 aa15.16■□□□□ 0.02
CSTF3-205ENST00000524775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.022e-12■■□□□ 14.3
CSTF3-205ENST00000524775 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
CSTF3-205ENST00000524775 WNK3Q9BYP7 1800 aa15.15■□□□□ 0.02
CSTF3-205ENST00000524775 NRAPQ86VF7 1730 aa15.15■□□□□ 0.02
CSTF3-205ENST00000524775 RLBP1P12271 317 aa15.15■□□□□ 0.02
CSTF3-205ENST00000524775 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
CSTF3-205ENST00000524775 TWISTNBQ3B726 338 aaPredicted RBP15.15■□□□□ 0.02
CSTF3-205ENST00000524775 MRPL50Q8N5N7 158 aaKnown RBP15.15■□□□□ 0.02
CSTF3-205ENST00000524775 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
CSTF3-205ENST00000524775 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
CSTF3-205ENST00000524775 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
CSTF3-205ENST00000524775 TATP17735 454 aaPredicted RBP15.13■□□□□ 0.01
CSTF3-205ENST00000524775 PANK1Q8TE04 598 aa15.13■□□□□ 0.01
CSTF3-205ENST00000524775 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
CSTF3-205ENST00000524775 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
CSTF3-205ENST00000524775 KDM6AO15550 1401 aaPredicted RBP15.12■□□□□ 0.01
CSTF3-205ENST00000524775 ELL2O00472 640 aaPredicted RBP15.12■□□□□ 0.01
CSTF3-205ENST00000524775 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
CSTF3-205ENST00000524775 RAPGEF4Q8WZA2 1011 aa15.12■□□□□ 0.01
CSTF3-205ENST00000524775 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
CSTF3-205ENST00000524775 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
CSTF3-205ENST00000524775 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
CSTF3-205ENST00000524775 LARP1Q6PKG0 1096 aaKnown RBP15.11■□□□□ 0.01
CSTF3-205ENST00000524775 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
CSTF3-205ENST00000524775 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
CSTF3-205ENST00000524775 NWD2Q9ULI1 1742 aa15.11■□□□□ 0.01
CSTF3-205ENST00000524775 MRC1P22897 1456 aa15.1■□□□□ 0.01
CSTF3-205ENST00000524775 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
CSTF3-205ENST00000524775 CYP27B1O15528 508 aa15.1■□□□□ 0.01
CSTF3-205ENST00000524775 TRIM27P14373 513 aa15.1■□□□□ 0.01
CSTF3-205ENST00000524775 PHKG2P15735 406 aa15.1■□□□□ 0.01
CSTF3-205ENST00000524775 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 C1orf141Q5JVX7 400 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 ATF7IPQ6VMQ6 1270 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 ARHGAP45Q92619 1136 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
CSTF3-205ENST00000524775 TOM1L2Q6ZVM7 507 aa15.08■□□□□ 0
CSTF3-205ENST00000524775 CERKQ8TCT0 537 aa15.08■□□□□ 0
CSTF3-205ENST00000524775 KIF16BQ96L93 1317 aa15.08■□□□□ 0
CSTF3-205ENST00000524775 HEG1Q9ULI3 1381 aa15.08■□□□□ 0
CSTF3-205ENST00000524775 DISP2A7MBM2 1401 aa15.08■□□□□ 0
CSTF3-205ENST00000524775 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
CSTF3-205ENST00000524775 N4BP2Q86UW6 1770 aaPredicted RBP15.07■□□□□ 0
CSTF3-205ENST00000524775 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
CSTF3-205ENST00000524775 KCNQ3O43525 872 aa15.07■□□□□ 0
CSTF3-205ENST00000524775 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
CSTF3-205ENST00000524775 BTG4Q9NY30 223 aa15.07■□□□□ 0
CSTF3-205ENST00000524775 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
CSTF3-205ENST00000524775 RGS12O14924 1447 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms