RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 QTRT2Q9H974 415 aaKnown RBP33.93■■■■□ 3.02
NKX2-1-204ENST00000522719 OVOS2A0A0G2JMS6 1433 aa33.93■■■■□ 3.02
NKX2-1-204ENST00000522719 DISP2A7MBM2 1401 aa33.93■■■■□ 3.02
NKX2-1-204ENST00000522719 AMOTQ4VCS5 1084 aa33.92■■■■□ 3.02
NKX2-1-204ENST00000522719 PKD1L3Q7Z443 1732 aa33.92■■■■□ 3.02
NKX2-1-204ENST00000522719 GJD4Q96KN9 370 aaPredicted RBP33.92■■■■□ 3.02
NKX2-1-204ENST00000522719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.92■■■■□ 3.02
NKX2-1-204ENST00000522719 PLEKHO1Q53GL0 409 aaPredicted RBP33.91■■■■□ 3.02
NKX2-1-204ENST00000522719 GLI3P10071 1580 aa33.9■■■■□ 3.02
NKX2-1-204ENST00000522719 APAF1O14727 1248 aa33.89■■■■□ 3.02
NKX2-1-204ENST00000522719 DLG5Q8TDM6 1919 aa33.88■■■■□ 3.01
NKX2-1-204ENST00000522719 GAS2L2Q8NHY3 880 aa33.87■■■■□ 3.01
NKX2-1-204ENST00000522719 NGEFQ8N5V2 710 aa33.87■■■■□ 3.01
NKX2-1-204ENST00000522719 SPG7Q9UQ90 795 aa33.87■■■■□ 3.01
NKX2-1-204ENST00000522719 NFE2L2Q16236 605 aa33.86■■■■□ 3.01
NKX2-1-204ENST00000522719 NCBP3Q53F19 620 aaKnown RBP33.86■■■■□ 3.01
NKX2-1-204ENST00000522719 TMPOP42166 694 aaKnown RBP33.85■■■■□ 3.01
NKX2-1-204ENST00000522719 MTHFSDQ2M296 383 aaKnown RBP33.85■■■■□ 3.01
NKX2-1-204ENST00000522719 PHF23Q9BUL5 403 aaPredicted RBP33.85■■■■□ 3.01
NKX2-1-204ENST00000522719 ZCRB1Q8TBF4 217 aaKnown RBP33.82■■■■□ 3
NKX2-1-204ENST00000522719 THSD7AQ9UPZ6 1657 aa33.82■■■■□ 3
NKX2-1-204ENST00000522719 SHANK3Q9BYB0 1731 aa33.81■■■■□ 3
NKX2-1-204ENST00000522719 HNRNPUQ00839 825 aaKnown RBP eCLIP33.81■■■■□ 3
NKX2-1-204ENST00000522719 FAM98CQ17RN3 349 aaKnown RBP33.81■■■■□ 3
NKX2-1-204ENST00000522719 ONECUT3O60422 494 aaPredicted RBP33.8■■■■□ 3
NKX2-1-204ENST00000522719 RGS17Q9UGC6 210 aaPredicted RBP33.8■■■■□ 3
NKX2-1-204ENST00000522719 RIPK4P57078 832 aa33.79■■■■□ 3
NKX2-1-204ENST00000522719 LRRC37A3O60309 1634 aa33.79■■■■□ 3
NKX2-1-204ENST00000522719 EXOC5O00471 708 aa33.79■■■■□ 3
NKX2-1-204ENST00000522719 RBM6P78332 1123 aaKnown RBP33.79■■■■□ 3
NKX2-1-204ENST00000522719 ZNF530Q6P9A1 599 aaPredicted RBP33.79■■■■□ 3
NKX2-1-204ENST00000522719 RRP7AQ9Y3A4 280 aaKnown RBP33.78■■■■□ 3
NKX2-1-204ENST00000522719 PCDH11XQ9BZA7 1347 aa33.78■■■■□ 3
NKX2-1-204ENST00000522719 PCDH11YQ9BZA8 1340 aa33.78■■■■□ 3
NKX2-1-204ENST00000522719 TNS2Q63HR2 1409 aa33.78■■■■□ 3
NKX2-1-204ENST00000522719 NEUROD2Q15784 382 aa33.77■■■■□ 3
NKX2-1-204ENST00000522719 LMOD3Q0VAK6 560 aa33.76■■■□□ 2.99
NKX2-1-204ENST00000522719 DDB1Q16531 1140 aa33.76■■■□□ 2.99
NKX2-1-204ENST00000522719 CCDC27Q2M243 656 aa33.76■■■□□ 2.99
NKX2-1-204ENST00000522719 AKAP4Q5JQC9 854 aa33.76■■■□□ 2.99
NKX2-1-204ENST00000522719 C1orf141Q5JVX7 400 aa33.76■■■□□ 2.99
NKX2-1-204ENST00000522719 MAP3K5Q99683 1374 aa33.74■■■□□ 2.99
NKX2-1-204ENST00000522719 VIRMAQ69YN4 1812 aaKnown RBP33.74■■■□□ 2.99
NKX2-1-204ENST00000522719 GNAT3A8MTJ3 354 aa33.74■■■□□ 2.99
NKX2-1-204ENST00000522719 HTATSF1O43719 755 aaKnown RBP33.74■■■□□ 2.99
NKX2-1-204ENST00000522719 IFNL2Q8IZJ0 200 aa33.74■■■□□ 2.99
NKX2-1-204ENST00000522719 SENP3-EIF4A1A0A087X0R7 540 aa33.71■■■□□ 2.99
NKX2-1-204ENST00000522719 CYP27B1O15528 508 aa33.71■■■□□ 2.99
NKX2-1-204ENST00000522719 PHKG2P15735 406 aa33.71■■■□□ 2.99
NKX2-1-204ENST00000522719 YTHDC1Q96MU7 727 aaKnown RBP33.71■■■□□ 2.99
NKX2-1-204ENST00000522719 RXRBP28702 533 aa33.7■■■□□ 2.99
NKX2-1-204ENST00000522719 TRIM35Q9UPQ4 493 aa33.7■■■□□ 2.99
NKX2-1-204ENST00000522719 A0A0G2JS52 829 aa33.7■■■□□ 2.98
NKX2-1-204ENST00000522719 HSP90AB1P08238 724 aaKnown RBP33.7■■■□□ 2.98
NKX2-1-204ENST00000522719 MYT1Q01538 1121 aa33.7■■■□□ 2.98
NKX2-1-204ENST00000522719 RTF1Q92541 710 aaKnown RBP33.7■■■□□ 2.98
NKX2-1-204ENST00000522719 SALL2Q9Y467 1007 aaPredicted RBP33.7■■■□□ 2.98
NKX2-1-204ENST00000522719 ZBED9Q6R2W3 1325 aa33.68■■■□□ 2.98
NKX2-1-204ENST00000522719 POTEAQ6S8J7 498 aa33.68■■■□□ 2.98
NKX2-1-204ENST00000522719 DDX54Q8TDD1 881 aaKnown RBP33.68■■■□□ 2.98
NKX2-1-204ENST00000522719 SCN11AQ9UI33 1791 aa33.68■■■□□ 2.98
NKX2-1-204ENST00000522719 ADAMTS7Q9UKP4 1686 aa33.67■■■□□ 2.98
NKX2-1-204ENST00000522719 WWC1Q8IX03 1113 aa33.67■■■□□ 2.98
NKX2-1-204ENST00000522719 SEPT12Q8IYM1 358 aa33.67■■■□□ 2.98
NKX2-1-204ENST00000522719 NKX1-1Q15270 411 aaPredicted RBP33.66■■■□□ 2.98
NKX2-1-204ENST00000522719 ZNF521Q96K83 1311 aa33.64■■■□□ 2.98
NKX2-1-204ENST00000522719 PDE3BQ13370 1112 aa33.63■■■□□ 2.97
NKX2-1-204ENST00000522719 DCAF5Q96JK2 942 aa33.63■■■□□ 2.97
NKX2-1-204ENST00000522719 BRWD3Q6RI45 1802 aa33.62■■■□□ 2.97
NKX2-1-204ENST00000522719 CALD1Q05682 793 aaKnown RBP33.61■■■□□ 2.97
NKX2-1-204ENST00000522719 MPRIPQ6WCQ1 1025 aa33.61■■■□□ 2.97
NKX2-1-204ENST00000522719 WDR63Q8IWG1 891 aa33.61■■■□□ 2.97
NKX2-1-204ENST00000522719 IL17REQ8NFR9 667 aa33.61■■■□□ 2.97
NKX2-1-204ENST00000522719 CEMIPQ8WUJ3 1361 aa33.6■■■□□ 2.97
NKX2-1-204ENST00000522719 RNMTO43148 476 aaKnown RBP33.6■■■□□ 2.97
NKX2-1-204ENST00000522719 MCM10Q7L590 875 aa33.6■■■□□ 2.97
NKX2-1-204ENST00000522719 MARCH10Q8NA82 808 aaPredicted RBP33.6■■■□□ 2.97
NKX2-1-204ENST00000522719 KDM6AO15550 1401 aaPredicted RBP33.59■■■□□ 2.97
NKX2-1-204ENST00000522719 DCTN1Q14203 1278 aa33.59■■■□□ 2.97
NKX2-1-204ENST00000522719 LGR6Q9HBX8 967 aa33.58■■■□□ 2.97
NKX2-1-204ENST00000522719 KAT6BQ8WYB5 2073 aa33.56■■■□□ 2.96
NKX2-1-204ENST00000522719 IL16Q14005 1332 aa33.55■■■□□ 2.96
NKX2-1-204ENST00000522719 THUMPD2Q9BTF0 503 aaKnown RBP33.54■■■□□ 2.96
NKX2-1-204ENST00000522719 SIPA1L3O60292 1781 aaPredicted RBP33.54■■■□□ 2.96
NKX2-1-204ENST00000522719 RGS12O14924 1447 aa33.54■■■□□ 2.96
NKX2-1-204ENST00000522719 ERVV-2B6SEH9 535 aa33.53■■■□□ 2.96
NKX2-1-204ENST00000522719 GOLGA2Q08379 1002 aa33.53■■■□□ 2.96
NKX2-1-204ENST00000522719 TOGARAM1Q9Y4F4 1720 aa33.53■■■□□ 2.96
NKX2-1-204ENST00000522719 MRC1P22897 1456 aa33.53■■■□□ 2.96
NKX2-1-204ENST00000522719 KRT27Q7Z3Y8 459 aa33.52■■■□□ 2.96
NKX2-1-204ENST00000522719 BCL9O00512 1426 aa33.51■■■□□ 2.96
NKX2-1-204ENST00000522719 ITGB4P16144 1822 aa33.51■■■□□ 2.96
NKX2-1-204ENST00000522719 TEFQ10587 303 aa33.51■■■□□ 2.95
NKX2-1-204ENST00000522719 DOT1LQ8TEK3 1739 aa33.5■■■□□ 2.95
NKX2-1-204ENST00000522719 SLC52A2Q9HAB3 445 aa33.49■■■□□ 2.95
NKX2-1-204ENST00000522719 IFT57Q9NWB7 429 aa33.48■■■□□ 2.95
NKX2-1-204ENST00000522719 GNAI1P63096 354 aa33.47■■■□□ 2.95
NKX2-1-204ENST00000522719 TAF7Q15545 349 aaPredicted RBP33.47■■■□□ 2.95
NKX2-1-204ENST00000522719 CFAP44Q96MT7 982 aa33.47■■■□□ 2.95
NKX2-1-204ENST00000522719 CABP4P57796 275 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms