RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SLC19A1P41440 591 aa9.59□□□□□ -0.87
PABPC1-220ENST00000522658 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.59□□□□□ -0.87
PABPC1-220ENST00000522658 NOS1P29475 1434 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 RIMS2Q9UQ26 1411 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-220ENST00000522658 S1PR4O95977 384 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 ADH1BP00325 375 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 ATF3P18847 181 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-220ENST00000522658 PLEKHG1Q9ULL1 1385 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
PABPC1-220ENST00000522658 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
PABPC1-220ENST00000522658 GNPATO15228 680 aa9.57□□□□□ -0.88
PABPC1-220ENST00000522658 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
PABPC1-220ENST00000522658 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-220ENST00000522658 SLAIN2Q9P270 581 aa9.57□□□□□ -0.88
PABPC1-220ENST00000522658 DIP2AQ14689 1571 aa9.57□□□□□ -0.88
PABPC1-220ENST00000522658 SPATA31A6Q5VVP1 1343 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
PABPC1-220ENST00000522658 TET3O43151 1660 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 ADGRL2O95490 1459 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 NR1I2O75469 434 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 SMYD5Q6GMV2 418 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
PABPC1-220ENST00000522658 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
PABPC1-220ENST00000522658 NCOA3Q9Y6Q9 1424 aa9.55□□□□□ -0.88
PABPC1-220ENST00000522658 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
PABPC1-220ENST00000522658 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
PABPC1-220ENST00000522658 TRPM2O94759 1503 aa9.54□□□□□ -0.88
PABPC1-220ENST00000522658 COL16A1Q07092 1604 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-220ENST00000522658 PRR20EP86478 221 aa9.53□□□□□ -0.88
PABPC1-220ENST00000522658 PRR20CP86479 221 aa9.53□□□□□ -0.88
PABPC1-220ENST00000522658 PRR20DP86480 221 aa9.53□□□□□ -0.88
PABPC1-220ENST00000522658 PRR20BP86481 221 aa9.53□□□□□ -0.88
PABPC1-220ENST00000522658 PRR20AP86496 221 aa9.53□□□□□ -0.88
PABPC1-220ENST00000522658 PUS10Q3MIT2 529 aaKnown RBP9.53□□□□□ -0.88
PABPC1-220ENST00000522658 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-220ENST00000522658 ZFYVE9O95405 1425 aa9.53□□□□□ -0.88
PABPC1-220ENST00000522658 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-220ENST00000522658 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-220ENST00000522658 PLA2G2CQ5R387 149 aa9.52□□□□□ -0.89
PABPC1-220ENST00000522658 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-220ENST00000522658 SLC6A16Q9GZN6 736 aa9.52□□□□□ -0.89
PABPC1-220ENST00000522658 TBX22Q9Y458 520 aa9.52□□□□□ -0.89
PABPC1-220ENST00000522658 AHDC1Q5TGY3 1603 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-220ENST00000522658 CHD2O14647 1828 aaKnown RBP9.52□□□□□ -0.89
PABPC1-220ENST00000522658 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
PABPC1-220ENST00000522658 PIK3R4Q99570 1358 aa9.51□□□□□ -0.89
PABPC1-220ENST00000522658 RXRBP28702 533 aa9.51□□□□□ -0.89
PABPC1-220ENST00000522658 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-220ENST00000522658 PHOX2BQ99453 314 aa9.51□□□□□ -0.89
PABPC1-220ENST00000522658 C19orf44Q9H6X5 657 aa9.51□□□□□ -0.89
PABPC1-220ENST00000522658 TMEM131LA2VDJ0 1609 aa9.51□□□□□ -0.89
PABPC1-220ENST00000522658 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
PABPC1-220ENST00000522658 UNC13BO14795 1591 aa9.5□□□□□ -0.89
PABPC1-220ENST00000522658 GDF9O60383 454 aa9.5□□□□□ -0.89
PABPC1-220ENST00000522658 ZNF326Q5BKZ1 582 aaKnown RBP9.5□□□□□ -0.89
PABPC1-220ENST00000522658 LRP6O75581 1613 aa9.49□□□□□ -0.89
PABPC1-220ENST00000522658 DCCP43146 1447 aa9.49□□□□□ -0.89
PABPC1-220ENST00000522658 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-220ENST00000522658 MORN1Q5T089 497 aa9.49□□□□□ -0.89
PABPC1-220ENST00000522658 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
PABPC1-220ENST00000522658 SPSB2Q99619 263 aa9.49□□□□□ -0.89
PABPC1-220ENST00000522658 ZNF697Q5TEC3 545 aa9.48□□□□□ -0.89
PABPC1-220ENST00000522658 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
PABPC1-220ENST00000522658 AMOTL2Q9Y2J4 779 aa9.48□□□□□ -0.89
PABPC1-220ENST00000522658 IQGAP3Q86VI3 1631 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 FUT2Q10981 343 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 C8orf37Q96NL8 207 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 E9PCH4 1651 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 AFF2P51816 1311 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 NUP155O75694 1391 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 ADAMTS13Q76LX8 1427 aa9.47□□□□□ -0.89
PABPC1-220ENST00000522658 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.89
PABPC1-220ENST00000522658 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 DGAT1O75907 488 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 ITGAEP38570 1179 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 GCGRP47871 477 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 ZNF787Q6DD87 383 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 BRINP3Q76B58 766 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 KDM2AQ9Y2K7 1162 aa9.46□□□□□ -0.9
PABPC1-220ENST00000522658 CDK12Q9NYV4 1490 aaPredicted RBP9.46□□□□□ -0.9
PABPC1-220ENST00000522658 MYT1Q01538 1121 aa9.45□□□□□ -0.9
PABPC1-220ENST00000522658 LRRC59Q96AG4 307 aaKnown RBP9.45□□□□□ -0.9
PABPC1-220ENST00000522658 ROCK1Q13464 1354 aa9.45□□□□□ -0.9
PABPC1-220ENST00000522658 ATP6V1AP38606 617 aa9.44□□□□□ -0.9
PABPC1-220ENST00000522658 SPHKAPQ2M3C7 1700 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 SETD5Q9C0A6 1442 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 ADGRL3Q9HAR2 1447 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 GPIHBP1Q8IV16 184 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 SULF1Q8IWU6 871 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
PABPC1-220ENST00000522658 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
PABPC1-220ENST00000522658 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
PABPC1-220ENST00000522658 XRN1Q8IZH2 1706 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms