RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, human

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HCC1-208	ENST00000522012	FAM208A	Q9UK61	1670 aa	Known RBP	27.99	■■■□□ 2.07
R3HCC1-208	ENST00000522012	AMOT	Q4VCS5	1084 aa		27.98	■■■□□ 2.07
R3HCC1-208	ENST00000522012	USP35	Q9P2H5	1018 aa		27.98	■■■□□ 2.07
R3HCC1-208	ENST00000522012	POTEA	Q6S8J7	498 aa		27.96	■■■□□ 2.07
R3HCC1-208	ENST00000522012	SLIT2	O94813	1529 aa		27.95	■■■□□ 2.06
R3HCC1-208	ENST00000522012	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.94	■■■□□ 2.06
R3HCC1-208	ENST00000522012	RTF1	Q92541	710 aa	Known RBP	27.94	■■■□□ 2.06
R3HCC1-208	ENST00000522012	THUMPD2	Q9BTF0	503 aa	Known RBP	27.94	■■■□□ 2.06
R3HCC1-208	ENST00000522012	SLFN5	Q08AF3	891 aa		27.93	■■■□□ 2.06
R3HCC1-208	ENST00000522012	DCTN1	Q14203	1278 aa		27.93	■■■□□ 2.06
R3HCC1-208	ENST00000522012	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.93	■■■□□ 2.06
R3HCC1-208	ENST00000522012	MEGF6	O75095	1541 aa		27.93	■■■□□ 2.06
R3HCC1-208	ENST00000522012	PLCH1	Q4KWH8	1693 aa		27.93	■■■□□ 2.06
R3HCC1-208	ENST00000522012	GNAT3	A8MTJ3	354 aa		27.92	■■■□□ 2.06
R3HCC1-208	ENST00000522012		E9PSI1	815 aa		27.92	■■■□□ 2.06
R3HCC1-208	ENST00000522012	IL2RB	P14784	551 aa		27.92	■■■□□ 2.06
R3HCC1-208	ENST00000522012	UNC5CL	Q8IV45	518 aa		27.92	■■■□□ 2.06
R3HCC1-208	ENST00000522012	SPG7	Q9UQ90	795 aa		27.92	■■■□□ 2.06
R3HCC1-208	ENST00000522012	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.92	■■■□□ 2.06
R3HCC1-208	ENST00000522012	MCM10	Q7L590	875 aa		27.91	■■■□□ 2.06
R3HCC1-208	ENST00000522012	CCDC9	Q9Y3X0	531 aa	Known RBP	27.91	■■■□□ 2.06
R3HCC1-208	ENST00000522012	MAP3K5	Q99683	1374 aa		27.9	■■■□□ 2.06
R3HCC1-208	ENST00000522012	HTATSF1	O43719	755 aa	Known RBP	27.9	■■■□□ 2.06
R3HCC1-208	ENST00000522012	CALD1	Q05682	793 aa	Known RBP	27.9	■■■□□ 2.06
R3HCC1-208	ENST00000522012	C1orf141	Q5JVX7	400 aa		27.9	■■■□□ 2.06
R3HCC1-208	ENST00000522012	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.9	■■■□□ 2.06
R3HCC1-208	ENST00000522012	IL16	Q14005	1332 aa		27.88	■■■□□ 2.05
R3HCC1-208	ENST00000522012	AKAP4	Q5JQC9	854 aa		27.88	■■■□□ 2.05
R3HCC1-208	ENST00000522012	USP21	Q9UK80	565 aa		27.88	■■■□□ 2.05
R3HCC1-208	ENST00000522012	PLEKHG2	Q9H7P9	1386 aa		27.87	■■■□□ 2.05
R3HCC1-208	ENST00000522012	SPATA31A1	Q5TZJ5	1347 aa		27.87	■■■□□ 2.05
R3HCC1-208	ENST00000522012	DUSP27	Q5VZP5	1158 aa		27.87	■■■□□ 2.05
R3HCC1-208	ENST00000522012	TRMT2A	Q8IZ69	625 aa	Known RBP	27.87	■■■□□ 2.05
R3HCC1-208	ENST00000522012	LAS1L	Q9Y4W2	734 aa	Known RBP	27.87	■■■□□ 2.05
R3HCC1-208	ENST00000522012	OVOS2	A0A0G2JMS6	1433 aa		27.87	■■■□□ 2.05
R3HCC1-208	ENST00000522012	BCL9L	Q86UU0	1499 aa		27.86	■■■□□ 2.05
R3HCC1-208	ENST00000522012	ZCRB1	Q8TBF4	217 aa	Known RBP	27.86	■■■□□ 2.05
R3HCC1-208	ENST00000522012	MYH16	Q9H6N6	1097 aa		27.86	■■■□□ 2.05
R3HCC1-208	ENST00000522012	SPATA31A5	Q5VU36	1347 aa		27.85	■■■□□ 2.05
R3HCC1-208	ENST00000522012	SPATA31A7	Q8IWB4	1347 aa		27.85	■■■□□ 2.05
R3HCC1-208	ENST00000522012	NRAP	Q86VF7	1730 aa		27.85	■■■□□ 2.05
R3HCC1-208	ENST00000522012	NWD2	Q9ULI1	1742 aa		27.85	■■■□□ 2.05
R3HCC1-208	ENST00000522012	VPS72	Q15906	364 aa		27.83	■■■□□ 2.05
R3HCC1-208	ENST00000522012	IL17RE	Q8NFR9	667 aa		27.83	■■■□□ 2.05
R3HCC1-208	ENST00000522012	THRAP3	Q9Y2W1	955 aa	Known RBP	27.83	■■■□□ 2.05
R3HCC1-208	ENST00000522012	AFF2	P51816	1311 aa		27.83	■■■□□ 2.05
R3HCC1-208	ENST00000522012	MPRIP	Q6WCQ1	1025 aa		27.82	■■■□□ 2.04
R3HCC1-208	ENST00000522012	PHKG2	P15735	406 aa		27.82	■■■□□ 2.04
R3HCC1-208	ENST00000522012	IFNL2	Q8IZJ0	200 aa		27.82	■■■□□ 2.04
R3HCC1-208	ENST00000522012	IFT57	Q9NWB7	429 aa		27.82	■■■□□ 2.04
R3HCC1-208	ENST00000522012	GNAI1	P63096	354 aa		27.81	■■■□□ 2.04
R3HCC1-208	ENST00000522012	TSR2	Q969E8	191 aa	Known RBP	27.81	■■■□□ 2.04
R3HCC1-208	ENST00000522012	LGR6	Q9HBX8	967 aa		27.8	■■■□□ 2.04
R3HCC1-208	ENST00000522012	DLG5	Q8TDM6	1919 aa		27.8	■■■□□ 2.04
R3HCC1-208	ENST00000522012	CYP27B1	O15528	508 aa		27.79	■■■□□ 2.04
R3HCC1-208	ENST00000522012	CFAP44	Q96MT7	982 aa		27.79	■■■□□ 2.04
R3HCC1-208	ENST00000522012	PCDH11X	Q9BZA7	1347 aa		27.79	■■■□□ 2.04
R3HCC1-208	ENST00000522012	PCDH11Y	Q9BZA8	1340 aa		27.79	■■■□□ 2.04
R3HCC1-208	ENST00000522012	DISP2	A7MBM2	1401 aa		27.78	■■■□□ 2.04
R3HCC1-208	ENST00000522012	DDX54	Q8TDD1	881 aa	Known RBP	27.78	■■■□□ 2.04
R3HCC1-208	ENST00000522012	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.78	■■■□□ 2.04
R3HCC1-208	ENST00000522012	FANCI	Q9NVI1	1328 aa		27.78	■■■□□ 2.04
R3HCC1-208	ENST00000522012	RNMT	O43148	476 aa	Known RBP	27.77	■■■□□ 2.04
R3HCC1-208	ENST00000522012	ZNF853	P0CG23	659 aa		27.77	■■■□□ 2.04
R3HCC1-208	ENST00000522012	PARP4	Q9UKK3	1724 aa	Known RBP	27.77	■■■□□ 2.04
R3HCC1-208	ENST00000522012	BARGIN	Q6ZT62	677 aa		27.77	■■■□□ 2.04
R3HCC1-208	ENST00000522012	EXOC5	O00471	708 aa		27.75	■■■□□ 2.03
R3HCC1-208	ENST00000522012	HSP90AB1	P08238	724 aa	Known RBP	27.75	■■■□□ 2.03
R3HCC1-208	ENST00000522012	MBIP	Q9NS73	344 aa		27.75	■■■□□ 2.03
R3HCC1-208	ENST00000522012	CEMIP	Q8WUJ3	1361 aa		27.75	■■■□□ 2.03
R3HCC1-208	ENST00000522012	ZNF772	Q68DY9	489 aa	Predicted RBP	27.74	■■■□□ 2.03
R3HCC1-208	ENST00000522012	PKD1L3	Q7Z443	1732 aa		27.73	■■■□□ 2.03
R3HCC1-208	ENST00000522012	CHL1	O00533	1208 aa		27.73	■■■□□ 2.03
R3HCC1-208	ENST00000522012	TEF	Q10587	303 aa		27.73	■■■□□ 2.03
R3HCC1-208	ENST00000522012	TAF7	Q15545	349 aa	Predicted RBP	27.72	■■■□□ 2.03
R3HCC1-208	ENST00000522012	FAM98C	Q17RN3	349 aa	Known RBP	27.72	■■■□□ 2.03
R3HCC1-208	ENST00000522012	DCAF5	Q96JK2	942 aa		27.72	■■■□□ 2.03
R3HCC1-208	ENST00000522012	MIS18A	Q9NYP9	233 aa		27.72	■■■□□ 2.03
R3HCC1-208	ENST00000522012	TRPC5	Q9UL62	973 aa	Predicted RBP	27.72	■■■□□ 2.03
R3HCC1-208	ENST00000522012	EXOSC9	Q06265	439 aa	Known RBP	27.71	■■■□□ 2.03
R3HCC1-208	ENST00000522012	TSPYL4	Q9UJ04	414 aa		27.71	■■■□□ 2.03
R3HCC1-208	ENST00000522012	RCAN3	Q9UKA8	241 aa		27.71	■■■□□ 2.03
R3HCC1-208	ENST00000522012	DDB1	Q16531	1140 aa		27.7	■■■□□ 2.02
R3HCC1-208	ENST00000522012	GJD4	Q96KN9	370 aa	Predicted RBP	27.7	■■■□□ 2.02
R3HCC1-208	ENST00000522012	KDM6A	O15550	1401 aa	Predicted RBP	27.69	■■■□□ 2.02
R3HCC1-208	ENST00000522012	QTRT2	Q9H974	415 aa	Known RBP	27.68	■■■□□ 2.02
R3HCC1-208	ENST00000522012	SUPT16H	Q9Y5B9	1047 aa	Known RBP	27.68	■■■□□ 2.02
R3HCC1-208	ENST00000522012	NKX1-1	Q15270	411 aa	Predicted RBP	27.67	■■■□□ 2.02
R3HCC1-208	ENST00000522012	ATRN	O75882	1429 aa		27.67	■■■□□ 2.02
R3HCC1-208	ENST00000522012	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.67	■■■□□ 2.02
R3HCC1-208	ENST00000522012		A0A0G2JS52	829 aa		27.67	■■■□□ 2.02
R3HCC1-208	ENST00000522012	MYT1	Q01538	1121 aa		27.67	■■■□□ 2.02
R3HCC1-208	ENST00000522012	BABAM1	Q9NWV8	329 aa		27.66	■■■□□ 2.02
R3HCC1-208	ENST00000522012	LRRC37A3	O60309	1634 aa		27.66	■■■□□ 2.02
R3HCC1-208	ENST00000522012	TNS2	Q63HR2	1409 aa		27.66	■■■□□ 2.02
R3HCC1-208	ENST00000522012	SLC52A2	Q9HAB3	445 aa		27.65	■■■□□ 2.02
R3HCC1-208	ENST00000522012	BTBD11	A6QL63	1104 aa		27.64	■■■□□ 2.02
R3HCC1-208	ENST00000522012	CABP4	P57796	275 aa		27.64	■■■□□ 2.02
R3HCC1-208	ENST00000522012	NFATC2IP	Q8NCF5	419 aa		27.63	■■■□□ 2.01
R3HCC1-208	ENST00000522012	ERVV-2	B6SEH9	535 aa		27.61	■■■□□ 2.01

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