RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
SREK1-209ENST00000520953 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
SREK1-209ENST00000520953 GAS2L2Q8NHY3 880 aa19.7■□□□□ 0.74
SREK1-209ENST00000520953 NGLY1Q96IV0 654 aa19.7■□□□□ 0.74
SREK1-209ENST00000520953 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
SREK1-209ENST00000520953 WDR63Q8IWG1 891 aa19.69■□□□□ 0.74
SREK1-209ENST00000520953 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
SREK1-209ENST00000520953 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
SREK1-209ENST00000520953 TATP17735 454 aaPredicted RBP19.68■□□□□ 0.74
SREK1-209ENST00000520953 TRMT2AQ8IZ69 625 aaKnown RBP19.68■□□□□ 0.74
SREK1-209ENST00000520953 BCL9LQ86UU0 1499 aa19.68■□□□□ 0.74
SREK1-209ENST00000520953 PLEKHO1Q53GL0 409 aaPredicted RBP19.67■□□□□ 0.74
SREK1-209ENST00000520953 NWD2Q9ULI1 1742 aa19.67■□□□□ 0.74
SREK1-209ENST00000520953 MAP3K5Q99683 1374 aa19.67■□□□□ 0.74
SREK1-209ENST00000520953 IL17REQ8NFR9 667 aa19.66■□□□□ 0.74
SREK1-209ENST00000520953 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
SREK1-209ENST00000520953 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
SREK1-209ENST00000520953 GNAT3A8MTJ3 354 aa19.66■□□□□ 0.74
SREK1-209ENST00000520953 E9PSI1 815 aa19.66■□□□□ 0.74
SREK1-209ENST00000520953 LGR6Q9HBX8 967 aa19.66■□□□□ 0.74
SREK1-209ENST00000520953 MEX3CQ5U5Q3 659 aaKnown RBP19.65■□□□□ 0.74
SREK1-209ENST00000520953 MPRIPQ6WCQ1 1025 aa19.65■□□□□ 0.74
SREK1-209ENST00000520953 IL2RBP14784 551 aa19.64■□□□□ 0.74
SREK1-209ENST00000520953 FKBP8Q14318 412 aa19.64■□□□□ 0.74
SREK1-209ENST00000520953 AMOTQ4VCS5 1084 aa19.64■□□□□ 0.74
SREK1-209ENST00000520953 PKD1L3Q7Z443 1732 aa19.64■□□□□ 0.73
SREK1-209ENST00000520953 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
SREK1-209ENST00000520953 UNC5CLQ8IV45 518 aa19.64■□□□□ 0.73
SREK1-209ENST00000520953 FNBP4Q8N3X1 1017 aaPredicted RBP19.64■□□□□ 0.73
SREK1-209ENST00000520953 CYP27B1O15528 508 aa19.63■□□□□ 0.73
SREK1-209ENST00000520953 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
SREK1-209ENST00000520953 PARP4Q9UKK3 1724 aaKnown RBP19.63■□□□□ 0.73
SREK1-209ENST00000520953 SPATA31A1Q5TZJ5 1347 aa19.63■□□□□ 0.73
SREK1-209ENST00000520953 FANCIQ9NVI1 1328 aa19.63■□□□□ 0.73
SREK1-209ENST00000520953 RTF1Q92541 710 aaKnown RBP19.63■□□□□ 0.73
SREK1-209ENST00000520953 CCDC9Q9Y3X0 531 aaKnown RBP19.63■□□□□ 0.73
SREK1-209ENST00000520953 SHANK3Q9BYB0 1731 aa19.62■□□□□ 0.73
SREK1-209ENST00000520953 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
SREK1-209ENST00000520953 AKAP4Q5JQC9 854 aa19.61■□□□□ 0.73
SREK1-209ENST00000520953 USP21Q9UK80 565 aa19.61■□□□□ 0.73
SREK1-209ENST00000520953 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
SREK1-209ENST00000520953 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
SREK1-209ENST00000520953 LRRC37A3O60309 1634 aa19.61■□□□□ 0.73
SREK1-209ENST00000520953 ZNF853P0CG23 659 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 PHKG2P15735 406 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 C1orf141Q5JVX7 400 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 SPG7Q9UQ90 795 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 AFF2P51816 1311 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 IL16Q14005 1332 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 VIRMAQ69YN4 1812 aaKnown RBP19.6■□□□□ 0.73
SREK1-209ENST00000520953 ZCRB1Q8TBF4 217 aaKnown RBP19.6■□□□□ 0.73
SREK1-209ENST00000520953 MBIPQ9NS73 344 aa19.6■□□□□ 0.73
SREK1-209ENST00000520953 WNK3Q9BYP7 1800 aa19.59■□□□□ 0.73
SREK1-209ENST00000520953 FBXO41Q8TF61 875 aa19.59■□□□□ 0.73
SREK1-209ENST00000520953 KDM6AO15550 1401 aaPredicted RBP19.59■□□□□ 0.73
SREK1-209ENST00000520953 NEFLP07196 543 aa19.59■□□□□ 0.73
SREK1-209ENST00000520953 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
SREK1-209ENST00000520953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.59■□□□□ 0.736e-7■■■□□ 15.6
SREK1-209ENST00000520953 CEMIPQ8WUJ3 1361 aa19.58■□□□□ 0.72
SREK1-209ENST00000520953 HTATSF1O43719 755 aaKnown RBP19.58■□□□□ 0.72
SREK1-209ENST00000520953 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
SREK1-209ENST00000520953 IFT57Q9NWB7 429 aa19.58■□□□□ 0.72
SREK1-209ENST00000520953 RNMTO43148 476 aaKnown RBP19.57■□□□□ 0.72
SREK1-209ENST00000520953 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
SREK1-209ENST00000520953 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
SREK1-209ENST00000520953 VPS72Q15906 364 aa19.57■□□□□ 0.72
SREK1-209ENST00000520953 KRT24Q2M2I5 525 aa19.56■□□□□ 0.72
SREK1-209ENST00000520953 IFNL2Q8IZJ0 200 aa19.56■□□□□ 0.72
SREK1-209ENST00000520953 GNAI1P63096 354 aa19.56■□□□□ 0.72
SREK1-209ENST00000520953 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
SREK1-209ENST00000520953 CHL1O00533 1208 aa19.55■□□□□ 0.72
SREK1-209ENST00000520953 CALD1Q05682 793 aaKnown RBP19.55■□□□□ 0.72
SREK1-209ENST00000520953 RCAN3Q9UKA8 241 aa19.55■□□□□ 0.72
SREK1-209ENST00000520953 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.55■□□□□ 0.72
SREK1-209ENST00000520953 ADAMTS7Q9UKP4 1686 aa19.54■□□□□ 0.72
SREK1-209ENST00000520953 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
SREK1-209ENST00000520953 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
SREK1-209ENST00000520953 TSPYL6Q8N831 410 aa19.54■□□□□ 0.72
SREK1-209ENST00000520953 SCN11AQ9UI33 1791 aa19.53■□□□□ 0.72
SREK1-209ENST00000520953 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
SREK1-209ENST00000520953 PLEKHG2Q9H7P9 1386 aa19.53■□□□□ 0.72
SREK1-209ENST00000520953 KCNQ3O43525 872 aa19.52■□□□□ 0.72
SREK1-209ENST00000520953 C8orf58Q8NAV2 365 aa19.52■□□□□ 0.72
SREK1-209ENST00000520953 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
SREK1-209ENST00000520953 GLI3P10071 1580 aa19.52■□□□□ 0.72
SREK1-209ENST00000520953 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
SREK1-209ENST00000520953 THRAP3Q9Y2W1 955 aaKnown RBP19.51■□□□□ 0.71
SREK1-209ENST00000520953 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
SREK1-209ENST00000520953 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
SREK1-209ENST00000520953 BARGINQ6ZT62 677 aa19.5■□□□□ 0.71
SREK1-209ENST00000520953 SIPA1L3O60292 1781 aaPredicted RBP19.5■□□□□ 0.71
SREK1-209ENST00000520953 TOGARAM1Q9Y4F4 1720 aa19.5■□□□□ 0.71
SREK1-209ENST00000520953 TEFQ10587 303 aa19.5■□□□□ 0.71
SREK1-209ENST00000520953 ATRNO75882 1429 aa19.5■□□□□ 0.71
SREK1-209ENST00000520953 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
SREK1-209ENST00000520953 EXOC5O00471 708 aa19.49■□□□□ 0.71
SREK1-209ENST00000520953 BCAR3O75815 825 aa19.49■□□□□ 0.71
SREK1-209ENST00000520953 NFATC2IPQ8NCF5 419 aa19.49■□□□□ 0.71
SREK1-209ENST00000520953 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
SREK1-209ENST00000520953 BCL2L13Q9BXK5 485 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms