RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 U2AF1L5P0DN76 240 aaPredicted RBP8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 U2AF1Q01081 240 aaKnown RBP eCLIP8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 WDR43Q15061 677 aaKnown RBP eCLIP8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 MEGF6O75095 1541 aa8.47□□□□□ -1.05
IGHV4-55-201ENST00000520889 ADAMTS7Q9UKP4 1686 aa8.46□□□□□ -1.05
IGHV4-55-201ENST00000520889 EXOC5O00471 708 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 NEFMP07197 916 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 DDB1Q16531 1140 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 SPG7Q9UQ90 795 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 PCDH11XQ9BZA7 1347 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 PCDH11YQ9BZA8 1340 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 DLG5Q8TDM6 1919 aa8.46□□□□□ -1.06
IGHV4-55-201ENST00000520889 SCN11AQ9UI33 1791 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 SBF2Q86WG5 1849 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 HSP90AB1P08238 724 aaKnown RBP8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 MIER1Q8N108 512 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 GAS2L2Q8NHY3 880 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 ZCRB1Q8TBF4 217 aaKnown RBP8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 PLEKHF1Q96S99 279 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 USP35Q9P2H5 1018 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 ADAMTS8Q9UP79 889 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 RGS12O14924 1447 aa8.45□□□□□ -1.06
IGHV4-55-201ENST00000520889 HTATSF1O43719 755 aaKnown RBP8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 CCDC184Q52MB2 194 aa8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 IFNL2Q8IZJ0 200 aa8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 USHBP1Q8N6Y0 703 aa8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
IGHV4-55-201ENST00000520889 HMOX1P09601 288 aa8.43□□□□□ -1.06
IGHV4-55-201ENST00000520889 PDE3BQ13370 1112 aa8.43□□□□□ -1.06
IGHV4-55-201ENST00000520889 AKAP4Q5JQC9 854 aa8.43□□□□□ -1.06
IGHV4-55-201ENST00000520889 MAPK8IP3Q9UPT6 1336 aa8.43□□□□□ -1.06
IGHV4-55-201ENST00000520889 KRT27Q7Z3Y8 459 aa8.42□□□□□ -1.06
IGHV4-55-201ENST00000520889 ITGB4P16144 1822 aa8.42□□□□□ -1.06
IGHV4-55-201ENST00000520889 SIPA1L3O60292 1781 aaPredicted RBP8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 NHSQ6T4R5 1651 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 CYP27B1O15528 508 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 PHKG2P15735 406 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 LMOD3Q0VAK6 560 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 MTHFSDQ2M296 383 aaKnown RBP8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 C1orf141Q5JVX7 400 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 PHACTR3Q96KR7 559 aa8.41□□□□□ -1.06
IGHV4-55-201ENST00000520889 RGPD3A6NKT7 1758 aaPredicted RBP8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 RGPD4Q7Z3J3 1758 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 MRC1P22897 1456 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 ERVV-2B6SEH9 535 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 NFE2L2Q16236 605 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 ZNF530Q6P9A1 599 aaPredicted RBP8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 MARCH10Q8NA82 808 aaPredicted RBP8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 KAT6BQ8WYB5 2073 aa8.4□□□□□ -1.06
IGHV4-55-201ENST00000520889 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.07
IGHV4-55-201ENST00000520889 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.07
IGHV4-55-201ENST00000520889 CEMIPQ8WUJ3 1361 aa8.39□□□□□ -1.07
IGHV4-55-201ENST00000520889 A0A0G2JS52 829 aa8.39□□□□□ -1.07
IGHV4-55-201ENST00000520889 ADRA2BP18089 450 aa8.39□□□□□ -1.07
IGHV4-55-201ENST00000520889 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
IGHV4-55-201ENST00000520889 MYT1Q01538 1121 aa8.39□□□□□ -1.07
IGHV4-55-201ENST00000520889 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
IGHV4-55-201ENST00000520889 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
IGHV4-55-201ENST00000520889 FAM9BQ8IZU0 186 aa8.38□□□□□ -1.07
IGHV4-55-201ENST00000520889 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
IGHV4-55-201ENST00000520889 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 TNS1Q9HBL0 1735 aaKnown RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 PAPPAQ13219 1627 aa8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 CICQ96RK0 1608 aaPredicted RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 RIPK4P57078 832 aa8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 RTF1Q92541 710 aaKnown RBP8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 BTAF1O14981 1849 aa8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 LY75O60449 1722 aa8.37□□□□□ -1.07
IGHV4-55-201ENST00000520889 KDM3BQ7LBC6 1761 aa8.36□□□□□ -1.07
IGHV4-55-201ENST00000520889 UBR2Q8IWV8 1755 aa8.36□□□□□ -1.07
IGHV4-55-201ENST00000520889 APAF1O14727 1248 aa8.36□□□□□ -1.07
IGHV4-55-201ENST00000520889 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
IGHV4-55-201ENST00000520889 IL17REQ8NFR9 667 aa8.36□□□□□ -1.07
IGHV4-55-201ENST00000520889 BCL11BQ9C0K0 894 aaPredicted RBP8.36□□□□□ -1.07
IGHV4-55-201ENST00000520889 IL16Q14005 1332 aa8.35□□□□□ -1.07
IGHV4-55-201ENST00000520889 MPRIPQ6WCQ1 1025 aa8.35□□□□□ -1.07
IGHV4-55-201ENST00000520889 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
IGHV4-55-201ENST00000520889 SLC52A2Q9HAB3 445 aa8.35□□□□□ -1.07
IGHV4-55-201ENST00000520889 TRIM35Q9UPQ4 493 aa8.35□□□□□ -1.07
IGHV4-55-201ENST00000520889 PLSCR1O15162 318 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms