RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ITGA6P23229 1130 aa9.86□□□□□ -0.83
CTHRC1-204ENST00000520880 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
CTHRC1-204ENST00000520880 KRT76Q01546 638 aa9.85□□□□□ -0.83
CTHRC1-204ENST00000520880 LYSMD3Q7Z3D4 306 aa9.85□□□□□ -0.83
CTHRC1-204ENST00000520880 NANOS1Q8WY41 292 aaKnown RBP9.85□□□□□ -0.83
CTHRC1-204ENST00000520880 CEP126Q9P2H0 1117 aa9.85□□□□□ -0.83
CTHRC1-204ENST00000520880 A0A1W2PRU2 124 aa9.84□□□□□ -0.83
CTHRC1-204ENST00000520880 MEN1O00255 615 aa9.84□□□□□ -0.83
CTHRC1-204ENST00000520880 PRICKLE2Q7Z3G6 844 aa9.84□□□□□ -0.83
CTHRC1-204ENST00000520880 OSBPL3Q9H4L5 887 aa9.84□□□□□ -0.83
CTHRC1-204ENST00000520880 TRAK2O60296 914 aa9.83□□□□□ -0.84
CTHRC1-204ENST00000520880 CCDC85AQ96PX6 553 aaPredicted RBP9.83□□□□□ -0.84
CTHRC1-204ENST00000520880 FAM181BA6NEQ2 426 aa9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 RHOQP17081 205 aa9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 CYP2U1Q7Z449 544 aa9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 VWA5B2Q8N398 1253 aa9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
CTHRC1-204ENST00000520880 CDC14CA4D256 554 aa9.81□□□□□ -0.84
CTHRC1-204ENST00000520880 CNTNAP3BQ96NU0 1288 aa9.81□□□□□ -0.84
CTHRC1-204ENST00000520880 CNTNAP3Q9BZ76 1288 aa9.81□□□□□ -0.84
CTHRC1-204ENST00000520880 GPC1P35052 558 aa9.8□□□□□ -0.84
CTHRC1-204ENST00000520880 VAC14Q08AM6 782 aa9.8□□□□□ -0.84
CTHRC1-204ENST00000520880 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
CTHRC1-204ENST00000520880 COL25A1Q9BXS0 654 aaPredicted RBP9.8□□□□□ -0.84
CTHRC1-204ENST00000520880 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
CTHRC1-204ENST00000520880 CUEDC1Q9NWM3 386 aaPredicted RBP9.8□□□□□ -0.84
CTHRC1-204ENST00000520880 EIF4G2P78344 907 aaKnown RBP eCLIP9.79□□□□□ -0.84
CTHRC1-204ENST00000520880 CLN3Q13286 438 aa9.79□□□□□ -0.84
CTHRC1-204ENST00000520880 MCM6Q14566 821 aa9.79□□□□□ -0.84
CTHRC1-204ENST00000520880 TSGA10IPQ3SY00 556 aa9.79□□□□□ -0.84
CTHRC1-204ENST00000520880 ABL2P42684 1182 aa9.78□□□□□ -0.84
CTHRC1-204ENST00000520880 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
CTHRC1-204ENST00000520880 PHTF2Q8N3S3 785 aa9.78□□□□□ -0.84
CTHRC1-204ENST00000520880 NLRP3Q96P20 1036 aa9.78□□□□□ -0.84
CTHRC1-204ENST00000520880 RAB6BQ9NRW1 208 aa9.78□□□□□ -0.84
CTHRC1-204ENST00000520880 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
CTHRC1-204ENST00000520880 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
CTHRC1-204ENST00000520880 POU4F2Q12837 409 aa9.76□□□□□ -0.85
CTHRC1-204ENST00000520880 SLC27A3Q5K4L6 730 aa9.76□□□□□ -0.85
CTHRC1-204ENST00000520880 GNRH1P01148 92 aa9.75□□□□□ -0.85
CTHRC1-204ENST00000520880 MYCP01106 439 aaPredicted RBP9.74□□□□□ -0.85
CTHRC1-204ENST00000520880 IL2RAP01589 272 aa9.74□□□□□ -0.85
CTHRC1-204ENST00000520880 SLFNL1Q499Z3 407 aa9.74□□□□□ -0.85
CTHRC1-204ENST00000520880 NBPF10Q6P3W6 841 aaKnown RBP9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 RNF135Q8IUD6 432 aa9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 NBPF15Q8N660 670 aa9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 CNKSR1Q969H4 720 aa9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 ESYT1Q9BSJ8 1104 aa9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 CHIC2Q9UKJ5 165 aa9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 DOLKQ9UPQ8 538 aa9.73□□□□□ -0.85
CTHRC1-204ENST00000520880 SPATA31C2B4DYI2 1134 aa9.72□□□□□ -0.85
CTHRC1-204ENST00000520880 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
CTHRC1-204ENST00000520880 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
CTHRC1-204ENST00000520880 DYRK1BQ9Y463 629 aa9.72□□□□□ -0.85
CTHRC1-204ENST00000520880 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
CTHRC1-204ENST00000520880 CENPCQ03188 943 aa9.71□□□□□ -0.86
CTHRC1-204ENST00000520880 DBN1Q16643 649 aa9.71□□□□□ -0.86
CTHRC1-204ENST00000520880 ZNF837Q96EG3 531 aaPredicted RBP9.71□□□□□ -0.86
CTHRC1-204ENST00000520880 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
CTHRC1-204ENST00000520880 USP4Q13107 963 aa9.7□□□□□ -0.86
CTHRC1-204ENST00000520880 GAS6Q14393 721 aa9.7□□□□□ -0.86
CTHRC1-204ENST00000520880 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
CTHRC1-204ENST00000520880 RIPOR1Q6ZS17 1223 aa9.7□□□□□ -0.86
CTHRC1-204ENST00000520880 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
CTHRC1-204ENST00000520880 GAS2L1Q99501 681 aaPredicted RBP9.7□□□□□ -0.86
CTHRC1-204ENST00000520880 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
CTHRC1-204ENST00000520880 SLURP2P0DP57 97 aa9.69□□□□□ -0.86
CTHRC1-204ENST00000520880 ZNF385CQ66K41 422 aaPredicted RBP9.69□□□□□ -0.86
CTHRC1-204ENST00000520880 TAS1R3Q7RTX0 852 aa9.69□□□□□ -0.86
CTHRC1-204ENST00000520880 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
CTHRC1-204ENST00000520880 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
CTHRC1-204ENST00000520880 GPR25O00155 361 aa9.68□□□□□ -0.86
CTHRC1-204ENST00000520880 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
CTHRC1-204ENST00000520880 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
CTHRC1-204ENST00000520880 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
CTHRC1-204ENST00000520880 TIMMDC1Q9NPL8 285 aa9.68□□□□□ -0.86
CTHRC1-204ENST00000520880 POM121Q96HA1 1249 aa9.67□□□□□ -0.86
CTHRC1-204ENST00000520880 GMCL1Q96IK5 515 aa9.67□□□□□ -0.86
CTHRC1-204ENST00000520880 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
CTHRC1-204ENST00000520880 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
CTHRC1-204ENST00000520880 SOX11P35716 441 aa9.66□□□□□ -0.86
CTHRC1-204ENST00000520880 PLPP7Q8NBV4 271 aa9.66□□□□□ -0.86
CTHRC1-204ENST00000520880 ADAMTS2O95450 1211 aa9.65□□□□□ -0.86
CTHRC1-204ENST00000520880 PHKA2P46019 1235 aa9.65□□□□□ -0.86
CTHRC1-204ENST00000520880 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.86
CTHRC1-204ENST00000520880 SVOPQ8N4V2 548 aa9.65□□□□□ -0.86
CTHRC1-204ENST00000520880 GTPBP3Q969Y2 492 aaKnown RBP9.65□□□□□ -0.86
CTHRC1-204ENST00000520880 ADAMTS8Q9UP79 889 aa9.65□□□□□ -0.86
CTHRC1-204ENST00000520880 H7C1W4 665 aa9.64□□□□□ -0.87
CTHRC1-204ENST00000520880 PIK3CDO00329 1044 aa9.64□□□□□ -0.87
CTHRC1-204ENST00000520880 MAP7D1Q3KQU3 841 aa9.64□□□□□ -0.87
CTHRC1-204ENST00000520880 SIRT1Q96EB6 747 aa9.64□□□□□ -0.87
CTHRC1-204ENST00000520880 F11P03951 625 aa9.63□□□□□ -0.87
CTHRC1-204ENST00000520880 SCNN1DP51172 638 aa9.63□□□□□ -0.87
CTHRC1-204ENST00000520880 SRSF11Q05519 484 aaKnown RBP9.63□□□□□ -0.87
CTHRC1-204ENST00000520880 TMEM214Q6NUQ4 689 aaKnown RBP9.63□□□□□ -0.87
CTHRC1-204ENST00000520880 THBS1P07996 1170 aa9.62□□□□□ -0.87
CTHRC1-204ENST00000520880 C4orf17Q53FE4 359 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms