RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	DDB1	Q16531	1140 aa		11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	SPON1	Q9HCB6	807 aa		11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	THRAP3	Q9Y2W1	955 aa	Known RBP	11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PARP4	Q9UKK3	1724 aa	Known RBP	11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	OVOS2	A0A0G2JMS6	1433 aa		11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	OVOS2	A0A0J9YW53	1432 aa		11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	OVOS2	Q6IE36	1432 aa		11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	LRRC37A3	O60309	1634 aa		11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PER1	O15534	1290 aa	Predicted RBP	11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	KCNQ2	O43526	872 aa		11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PTF1A	Q7RTS3	328 aa		11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	NGEF	Q8N5V2	710 aa		11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	TESK2	Q96S53	571 aa		11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	FBXO3	Q9UK99	471 aa		11.24	□□□□□ -0.61
CTNNA1-223	ENST00000520520	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.23	□□□□□ -0.61
CTNNA1-223	ENST00000520520	KNSTRN	Q9Y448	316 aa		11.23	□□□□□ -0.61
CTNNA1-223	ENST00000520520	USP6	P35125	1406 aa		11.23	□□□□□ -0.61
CTNNA1-223	ENST00000520520	MYOM1	P52179	1685 aa		11.23	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PIK3C2A	O00443	1686 aa		11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	ZBTB7A	O95365	584 aa		11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	EXOC6	Q8TAG9	804 aa		11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PANK3	Q9H999	370 aa		11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	NINL	Q9Y2I6	1382 aa		11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	AXIN2	Q9Y2T1	843 aa		11.22	□□□□□ -0.61
CTNNA1-223	ENST00000520520	RGPD5	Q99666	1765 aa		11.21	□□□□□ -0.61
CTNNA1-223	ENST00000520520	PPM1G	O15355	546 aa	Predicted RBP	11.21	□□□□□ -0.61
CTNNA1-223	ENST00000520520	DEK	P35659	375 aa	Known RBP	11.21	□□□□□ -0.61
CTNNA1-223	ENST00000520520	SBF2	Q86WG5	1849 aa		11.21	□□□□□ -0.62
CTNNA1-223	ENST00000520520	AKAP12	Q02952	1782 aa		11.21	□□□□□ -0.62
CTNNA1-223	ENST00000520520	PEAK1	Q9H792	1746 aa		11.21	□□□□□ -0.62
CTNNA1-223	ENST00000520520	AATK	Q6ZMQ8	1374 aa		11.2	□□□□□ -0.62
CTNNA1-223	ENST00000520520	EVC2	Q86UK5	1308 aa		11.2	□□□□□ -0.62
CTNNA1-223	ENST00000520520	CC2D1B	Q5T0F9	858 aa	Known RBP	11.2	□□□□□ -0.62
CTNNA1-223	ENST00000520520	MARCH10	Q8NA82	808 aa	Predicted RBP	11.2	□□□□□ -0.62
CTNNA1-223	ENST00000520520	WNK3	Q9BYP7	1800 aa		11.2	□□□□□ -0.62
CTNNA1-223	ENST00000520520	SLIT3	O75094	1523 aa		11.19	□□□□□ -0.62
CTNNA1-223	ENST00000520520	CPSF1	Q10570	1443 aa	Known RBP	11.19	□□□□□ -0.62
CTNNA1-223	ENST00000520520	WDR17	Q8IZU2	1322 aa		11.19	□□□□□ -0.62
CTNNA1-223	ENST00000520520	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNNA1-223	ENST00000520520	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	8e-8	■■□□□ 12.9
CTNNA1-223	ENST00000520520	TTC21B	Q7Z4L5	1316 aa		11.18	□□□□□ -0.62
CTNNA1-223	ENST00000520520	PDE4A	P27815	886 aa		11.18	□□□□□ -0.62
CTNNA1-223	ENST00000520520	ACSBG1	Q96GR2	724 aa		11.18	□□□□□ -0.62
CTNNA1-223	ENST00000520520	COL18A1	P39060	1754 aa		11.18	□□□□□ -0.62
CTNNA1-223	ENST00000520520	EXOC5	O00471	708 aa		11.17	□□□□□ -0.62
CTNNA1-223	ENST00000520520	PLSCR1	O15162	318 aa		11.17	□□□□□ -0.62
CTNNA1-223	ENST00000520520	BACH2	Q9BYV9	841 aa		11.17	□□□□□ -0.62
CTNNA1-223	ENST00000520520	STK32B	Q9NY57	414 aa		11.17	□□□□□ -0.62
CTNNA1-223	ENST00000520520	SBNO2	Q9Y2G9	1366 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	PPP2R1A	P30153	589 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	NBR1	Q14596	966 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	TXNRD1	Q16881	649 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	ARHGEF25	Q86VW2	580 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	KCNH5	Q8NCM2	988 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	RGPD4	Q7Z3J3	1758 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	CASZ1	Q86V15	1759 aa		11.16	□□□□□ -0.62
CTNNA1-223	ENST00000520520	GOLGA2	Q08379	1002 aa		11.15	□□□□□ -0.62
CTNNA1-223	ENST00000520520	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.15	□□□□□ -0.62
CTNNA1-223	ENST00000520520	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.15	□□□□□ -0.62
CTNNA1-223	ENST00000520520	CARD10	Q9BWT7	1032 aa		11.15	□□□□□ -0.62
CTNNA1-223	ENST00000520520	NLRP2	Q9NX02	1062 aa		11.15	□□□□□ -0.62
CTNNA1-223	ENST00000520520	DAXX	Q9UER7	740 aa	Predicted RBP	11.15	□□□□□ -0.62
CTNNA1-223	ENST00000520520	UTRN	P46939	3433 aa		11.15	□□□□□ -0.63
CTNNA1-223	ENST00000520520	PITPNM1	O00562	1244 aa		11.14	□□□□□ -0.63
CTNNA1-223	ENST00000520520	VASP	P50552	380 aa	Predicted RBP	11.14	□□□□□ -0.63
CTNNA1-223	ENST00000520520	NPM2	Q86SE8	214 aa	Known RBP	11.14	□□□□□ -0.63
CTNNA1-223	ENST00000520520	KLHL34	Q8N239	644 aa		11.14	□□□□□ -0.63
CTNNA1-223	ENST00000520520	CRBN	Q96SW2	442 aa		11.14	□□□□□ -0.63
CTNNA1-223	ENST00000520520	SALL2	Q9Y467	1007 aa	Predicted RBP	11.14	□□□□□ -0.63
CTNNA1-223	ENST00000520520	SLC15A2	Q16348	729 aa		11.13	□□□□□ -0.63
CTNNA1-223	ENST00000520520	NME9	Q86XW9	330 aa		11.13	□□□□□ -0.63
CTNNA1-223	ENST00000520520	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.13	□□□□□ -0.63
CTNNA1-223	ENST00000520520	VIRMA	Q69YN4	1812 aa	Known RBP	11.13	□□□□□ -0.63
CTNNA1-223	ENST00000520520	NFAT5	O94916	1531 aa		11.13	□□□□□ -0.63
CTNNA1-223	ENST00000520520	TTC21A	Q8NDW8	1320 aa		11.12	□□□□□ -0.63
CTNNA1-223	ENST00000520520	TNS2	Q63HR2	1409 aa		11.12	□□□□□ -0.63
CTNNA1-223	ENST00000520520	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNNA1-223	ENST00000520520	LTV1	Q96GA3	475 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNNA1-223	ENST00000520520	CDCA7L	Q96GN5	454 aa		11.12	□□□□□ -0.63
CTNNA1-223	ENST00000520520	ZNF521	Q96K83	1311 aa		11.11	□□□□□ -0.63
CTNNA1-223	ENST00000520520		E9PSI1	815 aa		11.11	□□□□□ -0.63
CTNNA1-223	ENST00000520520	PTGER2	P43116	358 aa		11.11	□□□□□ -0.63
CTNNA1-223	ENST00000520520	AAMP	Q13685	434 aa		11.11	□□□□□ -0.63
CTNNA1-223	ENST00000520520	KAT6B	Q8WYB5	2073 aa		11.11	□□□□□ -0.63
CTNNA1-223	ENST00000520520	LTN1	O94822	1766 aa		11.11	□□□□□ -0.63
CTNNA1-223	ENST00000520520	KDM2B	Q8NHM5	1336 aa		11.1	□□□□□ -0.63
CTNNA1-223	ENST00000520520	ANKRD24	Q8TF21	1146 aa		11.1	□□□□□ -0.63
CTNNA1-223	ENST00000520520	SYT17	Q9BSW7	474 aa		11.1	□□□□□ -0.63
CTNNA1-223	ENST00000520520	ADAMTS8	Q9UP79	889 aa		11.1	□□□□□ -0.63
CTNNA1-223	ENST00000520520	NHS	Q6T4R5	1651 aa		11.1	□□□□□ -0.63
CTNNA1-223	ENST00000520520	MON2	Q7Z3U7	1717 aa		11.09	□□□□□ -0.63
CTNNA1-223	ENST00000520520	IL2RB	P14784	551 aa		11.09	□□□□□ -0.63
CTNNA1-223	ENST00000520520	FAM161A	Q3B820	660 aa		11.09	□□□□□ -0.63
CTNNA1-223	ENST00000520520	DUSP27	Q5VZP5	1158 aa		11.09	□□□□□ -0.63
CTNNA1-223	ENST00000520520	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.09	□□□□□ -0.63
CTNNA1-223	ENST00000520520	DDX54	Q8TDD1	881 aa	Known RBP	11.09	□□□□□ -0.63
CTNNA1-223	ENST00000520520	SYTL4	Q96C24	671 aa	Predicted RBP	11.09	□□□□□ -0.63

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