RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
LINC00535-204ENST00000520513 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
LINC00535-204ENST00000520513 PCDHB11Q9Y5F2 797 aa10.5□□□□□ -0.73
LINC00535-204ENST00000520513 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
LINC00535-204ENST00000520513 CC2D2BQ6DHV5 1058 aa10.49□□□□□ -0.73
LINC00535-204ENST00000520513 CCDC155Q8N6L0 562 aa10.49□□□□□ -0.73
LINC00535-204ENST00000520513 TRAK2O60296 914 aa10.48□□□□□ -0.73
LINC00535-204ENST00000520513 MCCD1P59942 119 aaPredicted RBP10.48□□□□□ -0.73
LINC00535-204ENST00000520513 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
LINC00535-204ENST00000520513 ATP5J2-PTCD1G3V325 749 aa10.47□□□□□ -0.73
LINC00535-204ENST00000520513 KRT76Q01546 638 aa10.47□□□□□ -0.73
LINC00535-204ENST00000520513 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
LINC00535-204ENST00000520513 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
LINC00535-204ENST00000520513 A0A1W2PRU2 124 aa10.46□□□□□ -0.73
LINC00535-204ENST00000520513 ABL2P42684 1182 aa10.46□□□□□ -0.73
LINC00535-204ENST00000520513 ZSCAN1Q8NBB4 408 aa10.46□□□□□ -0.73
LINC00535-204ENST00000520513 FAM181BA6NEQ2 426 aa10.45□□□□□ -0.74
LINC00535-204ENST00000520513 RNF144AP50876 292 aaPredicted RBP10.45□□□□□ -0.74
LINC00535-204ENST00000520513 POM121Q96HA1 1249 aa10.44□□□□□ -0.74
LINC00535-204ENST00000520513 CUEDC1Q9NWM3 386 aaPredicted RBP10.44□□□□□ -0.74
LINC00535-204ENST00000520513 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
LINC00535-204ENST00000520513 COG6Q9Y2V7 657 aa10.44□□□□□ -0.74
LINC00535-204ENST00000520513 MEN1O00255 615 aa10.43□□□□□ -0.74
LINC00535-204ENST00000520513 RHOQP17081 205 aa10.43□□□□□ -0.74
LINC00535-204ENST00000520513 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
LINC00535-204ENST00000520513 STAU1O95793 577 aaKnown RBP10.42□□□□□ -0.74
LINC00535-204ENST00000520513 ITGA6P23229 1130 aa10.42□□□□□ -0.74
LINC00535-204ENST00000520513 LYSMD3Q7Z3D4 306 aa10.42□□□□□ -0.74
LINC00535-204ENST00000520513 NANOS1Q8WY41 292 aaKnown RBP10.42□□□□□ -0.74
LINC00535-204ENST00000520513 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
LINC00535-204ENST00000520513 RAB6BQ9NRW1 208 aa10.42□□□□□ -0.74
LINC00535-204ENST00000520513 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
LINC00535-204ENST00000520513 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC00535-204ENST00000520513 RNFT1Q5M7Z0 435 aa10.4□□□□□ -0.74
LINC00535-204ENST00000520513 CYP2U1Q7Z449 544 aa10.4□□□□□ -0.74
LINC00535-204ENST00000520513 VWA5B2Q8N398 1253 aa10.4□□□□□ -0.74
LINC00535-204ENST00000520513 IL2RAP01589 272 aa10.39□□□□□ -0.75
LINC00535-204ENST00000520513 CLN3Q13286 438 aa10.39□□□□□ -0.75
LINC00535-204ENST00000520513 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
LINC00535-204ENST00000520513 PRM3Q9NNZ6 103 aa10.38□□□□□ -0.75
LINC00535-204ENST00000520513 HRH3Q9Y5N1 445 aa10.38□□□□□ -0.75
LINC00535-204ENST00000520513 GPC1P35052 558 aa10.37□□□□□ -0.75
LINC00535-204ENST00000520513 POU4F2Q12837 409 aa10.37□□□□□ -0.75
LINC00535-204ENST00000520513 COL25A1Q9BXS0 654 aaPredicted RBP10.37□□□□□ -0.75
LINC00535-204ENST00000520513 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
LINC00535-204ENST00000520513 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
LINC00535-204ENST00000520513 RNF135Q8IUD6 432 aa10.36□□□□□ -0.75
LINC00535-204ENST00000520513 CNTNAP3BQ96NU0 1288 aa10.36□□□□□ -0.75
LINC00535-204ENST00000520513 CNTNAP3Q9BZ76 1288 aa10.36□□□□□ -0.75
LINC00535-204ENST00000520513 CDC14CA4D256 554 aa10.35□□□□□ -0.75
LINC00535-204ENST00000520513 DOLKQ9UPQ8 538 aa10.35□□□□□ -0.75
LINC00535-204ENST00000520513 GNRH1P01148 92 aa10.34□□□□□ -0.75
LINC00535-204ENST00000520513 WASHC4Q2M389 1173 aa10.34□□□□□ -0.75
LINC00535-204ENST00000520513 SLFNL1Q499Z3 407 aa10.34□□□□□ -0.75
LINC00535-204ENST00000520513 CNKSR1Q969H4 720 aa10.34□□□□□ -0.75
LINC00535-204ENST00000520513 NLRP3Q96P20 1036 aa10.34□□□□□ -0.75
LINC00535-204ENST00000520513 OXLD1Q5BKU9 147 aa10.33□□□□□ -0.76
LINC00535-204ENST00000520513 ESYT1Q9BSJ8 1104 aa10.33□□□□□ -0.76
LINC00535-204ENST00000520513 FHDC1Q9C0D6 1143 aaPredicted RBP10.33□□□□□ -0.76
LINC00535-204ENST00000520513 CENPCQ03188 943 aa10.32□□□□□ -0.76
LINC00535-204ENST00000520513 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
LINC00535-204ENST00000520513 NBPF10Q6P3W6 841 aaKnown RBP10.32□□□□□ -0.76
LINC00535-204ENST00000520513 NBPF15Q8N660 670 aa10.32□□□□□ -0.76
LINC00535-204ENST00000520513 XAGE2Q96GT9 111 aa10.32□□□□□ -0.76
LINC00535-204ENST00000520513 ETNK1Q9HBU6 452 aa10.32□□□□□ -0.76
LINC00535-204ENST00000520513 SPATA31C2B4DYI2 1134 aa10.31□□□□□ -0.76
LINC00535-204ENST00000520513 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
LINC00535-204ENST00000520513 GAS6Q14393 721 aa10.31□□□□□ -0.76
LINC00535-204ENST00000520513 DBN1Q16643 649 aa10.31□□□□□ -0.76
LINC00535-204ENST00000520513 SV2AQ7L0J3 742 aa10.31□□□□□ -0.76
LINC00535-204ENST00000520513 ADAMTS19Q8TE59 1207 aa10.31□□□□□ -0.76
LINC00535-204ENST00000520513 ALG2Q9H553 416 aa10.31□□□□□ -0.76
LINC00535-204ENST00000520513 POM121CA8CG34 1229 aa10.3□□□□□ -0.76
LINC00535-204ENST00000520513 THBS1P07996 1170 aa10.3□□□□□ -0.76
LINC00535-204ENST00000520513 PLPP7Q8NBV4 271 aa10.3□□□□□ -0.76
LINC00535-204ENST00000520513 ZNF837Q96EG3 531 aaPredicted RBP10.3□□□□□ -0.76
LINC00535-204ENST00000520513 SCNN1DP51172 638 aa10.29□□□□□ -0.76
LINC00535-204ENST00000520513 SEMA3FQ13275 785 aa10.29□□□□□ -0.76
LINC00535-204ENST00000520513 WHAMMQ8TF30 809 aa10.29□□□□□ -0.76
LINC00535-204ENST00000520513 ESF1Q9H501 851 aaKnown RBP10.29□□□□□ -0.76
LINC00535-204ENST00000520513 USP4Q13107 963 aa10.28□□□□□ -0.76
LINC00535-204ENST00000520513 DYRK1BQ9Y463 629 aa10.28□□□□□ -0.76
LINC00535-204ENST00000520513 GPR25O00155 361 aa10.27□□□□□ -0.77
LINC00535-204ENST00000520513 WASLO00401 505 aaPredicted RBP10.27□□□□□ -0.77
LINC00535-204ENST00000520513 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.77
LINC00535-204ENST00000520513 SOX11P35716 441 aa10.26□□□□□ -0.77
LINC00535-204ENST00000520513 PHKA2P46019 1235 aa10.26□□□□□ -0.77
LINC00535-204ENST00000520513 TAS1R3Q7RTX0 852 aa10.26□□□□□ -0.77
LINC00535-204ENST00000520513 TRIM22Q8IYM9 498 aa10.26□□□□□ -0.77
LINC00535-204ENST00000520513 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
LINC00535-204ENST00000520513 SLURP2P0DP57 97 aa10.25□□□□□ -0.77
LINC00535-204ENST00000520513 ZNF385CQ66K41 422 aaPredicted RBP10.25□□□□□ -0.77
LINC00535-204ENST00000520513 RIPOR1Q6ZS17 1223 aa10.25□□□□□ -0.77
LINC00535-204ENST00000520513 ZSCAN10Q96SZ4 725 aaPredicted RBP10.25□□□□□ -0.77
LINC00535-204ENST00000520513 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
LINC00535-204ENST00000520513 MAP7D1Q3KQU3 841 aa10.24□□□□□ -0.77
LINC00535-204ENST00000520513 C4orf17Q53FE4 359 aa10.24□□□□□ -0.77
LINC00535-204ENST00000520513 WDR44Q5JSH3 913 aa10.24□□□□□ -0.77
LINC00535-204ENST00000520513 TIMMDC1Q9NPL8 285 aa10.24□□□□□ -0.77
LINC00535-204ENST00000520513 TMEM229AB2RXF0 380 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms