RNA–Protein interactions for RNA: ENST00000520354.5

GINS4-204, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 835 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-204ENST00000520354 PTF1AQ7RTS3 328 aa16.93■□□□□ 0.3
GINS4-204ENST00000520354 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
GINS4-204ENST00000520354 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
GINS4-204ENST00000520354 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
GINS4-204ENST00000520354 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
GINS4-204ENST00000520354 MTHFSP49914 203 aa16.91■□□□□ 0.3
GINS4-204ENST00000520354 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
GINS4-204ENST00000520354 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
GINS4-204ENST00000520354 BCL11BQ9C0K0 894 aaPredicted RBP16.9■□□□□ 0.3
GINS4-204ENST00000520354 RREB1Q92766 1687 aa16.9■□□□□ 0.3
GINS4-204ENST00000520354 IGSF1Q8N6C5 1336 aa16.9■□□□□ 0.3
GINS4-204ENST00000520354 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.3
GINS4-204ENST00000520354 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.3
GINS4-204ENST00000520354 BTAF1O14981 1849 aa16.89■□□□□ 0.29
GINS4-204ENST00000520354 KCNQ2O43526 872 aa16.89■□□□□ 0.29
GINS4-204ENST00000520354 CAMKK2Q96RR4 588 aa16.89■□□□□ 0.29
GINS4-204ENST00000520354 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
GINS4-204ENST00000520354 PCDH11XQ9BZA7 1347 aa16.87■□□□□ 0.29
GINS4-204ENST00000520354 PCDH11YQ9BZA8 1340 aa16.87■□□□□ 0.29
GINS4-204ENST00000520354 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
GINS4-204ENST00000520354 IL13P35225 146 aa16.86■□□□□ 0.29
GINS4-204ENST00000520354 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
GINS4-204ENST00000520354 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
GINS4-204ENST00000520354 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
GINS4-204ENST00000520354 CYP27B1O15528 508 aa16.84■□□□□ 0.29
GINS4-204ENST00000520354 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
GINS4-204ENST00000520354 TOGARAM1Q9Y4F4 1720 aa16.84■□□□□ 0.29
GINS4-204ENST00000520354 PLSCR1O15162 318 aa16.83■□□□□ 0.28
GINS4-204ENST00000520354 DIAPH1O60610 1272 aaKnown RBP16.83■□□□□ 0.28
GINS4-204ENST00000520354 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
GINS4-204ENST00000520354 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
GINS4-204ENST00000520354 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
GINS4-204ENST00000520354 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
GINS4-204ENST00000520354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.82■□□□□ 0.28
GINS4-204ENST00000520354 ITGB4P16144 1822 aa16.82■□□□□ 0.28
GINS4-204ENST00000520354 KDRP35968 1356 aa16.81■□□□□ 0.28
GINS4-204ENST00000520354 PLEKHG2Q9H7P9 1386 aa16.8■□□□□ 0.28
GINS4-204ENST00000520354 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
GINS4-204ENST00000520354 HMOX1P09601 288 aa16.79■□□□□ 0.28
GINS4-204ENST00000520354 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
GINS4-204ENST00000520354 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
GINS4-204ENST00000520354 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
GINS4-204ENST00000520354 PHKG2P15735 406 aa16.78■□□□□ 0.28
GINS4-204ENST00000520354 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
GINS4-204ENST00000520354 IFNL2Q8IZJ0 200 aa16.78■□□□□ 0.28
GINS4-204ENST00000520354 PROM2Q8N271 834 aa16.78■□□□□ 0.28
GINS4-204ENST00000520354 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
GINS4-204ENST00000520354 NKX1-1Q15270 411 aaPredicted RBP16.77■□□□□ 0.28
GINS4-204ENST00000520354 TXNRD1Q16881 649 aa16.77■□□□□ 0.28
GINS4-204ENST00000520354 LY75O60449 1722 aa16.76■□□□□ 0.27
GINS4-204ENST00000520354 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
GINS4-204ENST00000520354 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
GINS4-204ENST00000520354 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
GINS4-204ENST00000520354 MPRIPQ6WCQ1 1025 aa16.75■□□□□ 0.27
GINS4-204ENST00000520354 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
GINS4-204ENST00000520354 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
GINS4-204ENST00000520354 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
GINS4-204ENST00000520354 PAPPAQ13219 1627 aa16.72■□□□□ 0.27
GINS4-204ENST00000520354 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
GINS4-204ENST00000520354 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
GINS4-204ENST00000520354 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
GINS4-204ENST00000520354 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
GINS4-204ENST00000520354 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
GINS4-204ENST00000520354 RALBP1Q15311 655 aa16.71■□□□□ 0.27
GINS4-204ENST00000520354 PIGBQ92521 554 aa16.71■□□□□ 0.27
GINS4-204ENST00000520354 LRRC4BQ9NT99 713 aa16.71■□□□□ 0.27
GINS4-204ENST00000520354 KCNQ4P56696 695 aa16.7■□□□□ 0.26
GINS4-204ENST00000520354 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
GINS4-204ENST00000520354 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
GINS4-204ENST00000520354 PALLDQ8WX93 1383 aa16.69■□□□□ 0.26
GINS4-204ENST00000520354 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
GINS4-204ENST00000520354 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
GINS4-204ENST00000520354 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
GINS4-204ENST00000520354 MTHFSDQ2M296 383 aaKnown RBP16.68■□□□□ 0.26
GINS4-204ENST00000520354 AKAP4Q5JQC9 854 aa16.68■□□□□ 0.26
GINS4-204ENST00000520354 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
GINS4-204ENST00000520354 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
GINS4-204ENST00000520354 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
GINS4-204ENST00000520354 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
GINS4-204ENST00000520354 C5P01031 1676 aa16.67■□□□□ 0.26
GINS4-204ENST00000520354 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
GINS4-204ENST00000520354 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
GINS4-204ENST00000520354 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
GINS4-204ENST00000520354 TUBGCP6Q96RT7 1819 aa16.66■□□□□ 0.26
GINS4-204ENST00000520354 SLC15A2Q16348 729 aa16.66■□□□□ 0.26
GINS4-204ENST00000520354 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
GINS4-204ENST00000520354 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
GINS4-204ENST00000520354 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
GINS4-204ENST00000520354 CABP4P57796 275 aa16.65■□□□□ 0.26
GINS4-204ENST00000520354 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
GINS4-204ENST00000520354 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
GINS4-204ENST00000520354 LRP5O75197 1615 aa16.65■□□□□ 0.26
GINS4-204ENST00000520354 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
GINS4-204ENST00000520354 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.25
GINS4-204ENST00000520354 ATG3Q9NT62 314 aa16.64■□□□□ 0.25
GINS4-204ENST00000520354 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
GINS4-204ENST00000520354 FCHSD2O94868 740 aa16.63■□□□□ 0.25
GINS4-204ENST00000520354 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
GINS4-204ENST00000520354 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
GINS4-204ENST00000520354 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms