RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 SPINK5Q9NQ38 1064 aaPredicted RBP28.16■■■□□ 2.1
PTP4A3-203ENST00000520105 NRAPQ86VF7 1730 aa28.16■■■□□ 2.1
PTP4A3-203ENST00000520105 DCTN1Q14203 1278 aa28.15■■■□□ 2.1
PTP4A3-203ENST00000520105 THUMPD2Q9BTF0 503 aaKnown RBP28.15■■■□□ 2.1
PTP4A3-203ENST00000520105 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
PTP4A3-203ENST00000520105 AMOTQ4VCS5 1084 aa28.15■■■□□ 2.1
PTP4A3-203ENST00000520105 FNBP4Q8N3X1 1017 aaPredicted RBP28.15■■■□□ 2.1
PTP4A3-203ENST00000520105 UNC5CLQ8IV45 518 aa28.14■■■□□ 2.1
PTP4A3-203ENST00000520105 WDR63Q8IWG1 891 aa28.14■■■□□ 2.1
PTP4A3-203ENST00000520105 BCL9LQ86UU0 1499 aa28.13■■■□□ 2.09
PTP4A3-203ENST00000520105 LMOD3Q0VAK6 560 aa28.12■■■□□ 2.09
PTP4A3-203ENST00000520105 ZNF530Q6P9A1 599 aaPredicted RBP28.12■■■□□ 2.09
PTP4A3-203ENST00000520105 IL2RBP14784 551 aa28.11■■■□□ 2.09
PTP4A3-203ENST00000520105 SLFN5Q08AF3 891 aa28.11■■■□□ 2.09
PTP4A3-203ENST00000520105 MCM10Q7L590 875 aa28.11■■■□□ 2.09
PTP4A3-203ENST00000520105 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
PTP4A3-203ENST00000520105 USP21Q9UK80 565 aa28.1■■■□□ 2.09
PTP4A3-203ENST00000520105 CCDC9Q9Y3X0 531 aaKnown RBP28.1■■■□□ 2.09
PTP4A3-203ENST00000520105 SPATA31A1Q5TZJ5 1347 aa28.09■■■□□ 2.09
PTP4A3-203ENST00000520105 RTF1Q92541 710 aaKnown RBP28.08■■■□□ 2.09
PTP4A3-203ENST00000520105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.08■■■□□ 2.09
PTP4A3-203ENST00000520105 SPG7Q9UQ90 795 aa28.08■■■□□ 2.09
PTP4A3-203ENST00000520105 OVOS2A0A0G2JMS6 1433 aa28.07■■■□□ 2.08
PTP4A3-203ENST00000520105 MAP3K5Q99683 1374 aa28.07■■■□□ 2.08
PTP4A3-203ENST00000520105 SPATA31A5Q5VU36 1347 aa28.07■■■□□ 2.08
PTP4A3-203ENST00000520105 SPATA31A7Q8IWB4 1347 aa28.07■■■□□ 2.08
PTP4A3-203ENST00000520105 E9PSI1 815 aa28.07■■■□□ 2.08
PTP4A3-203ENST00000520105 AKAP4Q5JQC9 854 aa28.06■■■□□ 2.08
PTP4A3-203ENST00000520105 AFF2P51816 1311 aa28.06■■■□□ 2.08
PTP4A3-203ENST00000520105 C1orf141Q5JVX7 400 aa28.06■■■□□ 2.08
PTP4A3-203ENST00000520105 DUSP27Q5VZP5 1158 aa28.06■■■□□ 2.08
PTP4A3-203ENST00000520105 HTATSF1O43719 755 aaKnown RBP28.05■■■□□ 2.08
PTP4A3-203ENST00000520105 TRMT2AQ8IZ69 625 aaKnown RBP28.05■■■□□ 2.08
PTP4A3-203ENST00000520105 IL17REQ8NFR9 667 aa28.05■■■□□ 2.08
PTP4A3-203ENST00000520105 VPS72Q15906 364 aa28.04■■■□□ 2.08
PTP4A3-203ENST00000520105 ZCRB1Q8TBF4 217 aaKnown RBP28.04■■■□□ 2.08
PTP4A3-203ENST00000520105 PARP4Q9UKK3 1724 aaKnown RBP28.04■■■□□ 2.08
PTP4A3-203ENST00000520105 CYP27B1O15528 508 aa28.03■■■□□ 2.08
PTP4A3-203ENST00000520105 MPRIPQ6WCQ1 1025 aa28.03■■■□□ 2.08
PTP4A3-203ENST00000520105 LAS1LQ9Y4W2 734 aaKnown RBP28.03■■■□□ 2.08
PTP4A3-203ENST00000520105 PLEKHG2Q9H7P9 1386 aa28.03■■■□□ 2.08
PTP4A3-203ENST00000520105 IL16Q14005 1332 aa28.03■■■□□ 2.08
PTP4A3-203ENST00000520105 LGR6Q9HBX8 967 aa28.02■■■□□ 2.08
PTP4A3-203ENST00000520105 THRAP3Q9Y2W1 955 aaKnown RBP28.02■■■□□ 2.08
PTP4A3-203ENST00000520105 PKD1L3Q7Z443 1732 aa28.02■■■□□ 2.08
PTP4A3-203ENST00000520105 DISP2A7MBM2 1401 aa28.01■■■□□ 2.07
PTP4A3-203ENST00000520105 PHKG2P15735 406 aa28.01■■■□□ 2.07
PTP4A3-203ENST00000520105 CALD1Q05682 793 aaKnown RBP28.01■■■□□ 2.07
PTP4A3-203ENST00000520105 IFNL2Q8IZJ0 200 aa28■■■□□ 2.07
PTP4A3-203ENST00000520105 TSR2Q969E8 191 aaKnown RBP28■■■□□ 2.07
PTP4A3-203ENST00000520105 MYH16Q9H6N6 1097 aa27.99■■■□□ 2.07
PTP4A3-203ENST00000520105 DDX54Q8TDD1 881 aaKnown RBP27.98■■■□□ 2.07
PTP4A3-203ENST00000520105 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.98■■■□□ 2.07
PTP4A3-203ENST00000520105 ZNF853P0CG23 659 aa27.97■■■□□ 2.07
PTP4A3-203ENST00000520105 IFT57Q9NWB7 429 aa27.97■■■□□ 2.07
PTP4A3-203ENST00000520105 PCDH11XQ9BZA7 1347 aa27.97■■■□□ 2.07
PTP4A3-203ENST00000520105 PCDH11YQ9BZA8 1340 aa27.97■■■□□ 2.07
PTP4A3-203ENST00000520105 RNMTO43148 476 aaKnown RBP27.96■■■□□ 2.07
PTP4A3-203ENST00000520105 GNAI1P63096 354 aa27.96■■■□□ 2.07
PTP4A3-203ENST00000520105 BARGINQ6ZT62 677 aa27.96■■■□□ 2.07
PTP4A3-203ENST00000520105 CFAP44Q96MT7 982 aa27.96■■■□□ 2.07
PTP4A3-203ENST00000520105 FAM98CQ17RN3 349 aaKnown RBP27.95■■■□□ 2.07
PTP4A3-203ENST00000520105 FANCIQ9NVI1 1328 aa27.95■■■□□ 2.07
PTP4A3-203ENST00000520105 CEMIPQ8WUJ3 1361 aa27.95■■■□□ 2.07
PTP4A3-203ENST00000520105 CDCA7Q9BWT1 371 aaPredicted RBP27.95■■■□□ 2.06
PTP4A3-203ENST00000520105 EXOC5O00471 708 aa27.94■■■□□ 2.06
PTP4A3-203ENST00000520105 MIS18AQ9NYP9 233 aa27.94■■■□□ 2.06
PTP4A3-203ENST00000520105 WNK3Q9BYP7 1800 aa27.94■■■□□ 2.06
PTP4A3-203ENST00000520105 SHANK3Q9BYB0 1731 aa27.94■■■□□ 2.06
PTP4A3-203ENST00000520105 MBIPQ9NS73 344 aa27.93■■■□□ 2.06
PTP4A3-203ENST00000520105 GJD4Q96KN9 370 aaPredicted RBP27.92■■■□□ 2.06
PTP4A3-203ENST00000520105 TRPC5Q9UL62 973 aaPredicted RBP27.92■■■□□ 2.06
PTP4A3-203ENST00000520105 VIRMAQ69YN4 1812 aaKnown RBP27.92■■■□□ 2.06
PTP4A3-203ENST00000520105 CHL1O00533 1208 aa27.91■■■□□ 2.06
PTP4A3-203ENST00000520105 QTRT2Q9H974 415 aaKnown RBP27.91■■■□□ 2.06
PTP4A3-203ENST00000520105 KDM6AO15550 1401 aaPredicted RBP27.91■■■□□ 2.06
PTP4A3-203ENST00000520105 DCAF5Q96JK2 942 aa27.91■■■□□ 2.06
PTP4A3-203ENST00000520105 HSP90AB1P08238 724 aaKnown RBP27.9■■■□□ 2.06
PTP4A3-203ENST00000520105 TEFQ10587 303 aa27.9■■■□□ 2.06
PTP4A3-203ENST00000520105 TAF7Q15545 349 aaPredicted RBP27.9■■■□□ 2.06
PTP4A3-203ENST00000520105 DDB1Q16531 1140 aa27.9■■■□□ 2.06
PTP4A3-203ENST00000520105 LRRC37A3O60309 1634 aa27.9■■■□□ 2.06
PTP4A3-203ENST00000520105 ATRNO75882 1429 aa27.9■■■□□ 2.06
PTP4A3-203ENST00000520105 EXOSC9Q06265 439 aaKnown RBP27.89■■■□□ 2.05
PTP4A3-203ENST00000520105 NKX1-1Q15270 411 aaPredicted RBP27.87■■■□□ 2.05
PTP4A3-203ENST00000520105 SCN11AQ9UI33 1791 aa27.87■■■□□ 2.05
PTP4A3-203ENST00000520105 ADAMTS7Q9UKP4 1686 aa27.87■■■□□ 2.05
PTP4A3-203ENST00000520105 TSPYL4Q9UJ04 414 aa27.87■■■□□ 2.05
PTP4A3-203ENST00000520105 GLI3P10071 1580 aa27.87■■■□□ 2.05
PTP4A3-203ENST00000520105 TNS2Q63HR2 1409 aa27.86■■■□□ 2.05
PTP4A3-203ENST00000520105 A0A0G2JS52 829 aa27.85■■■□□ 2.05
PTP4A3-203ENST00000520105 MYT1Q01538 1121 aa27.85■■■□□ 2.05
PTP4A3-203ENST00000520105 NFATC2IPQ8NCF5 419 aa27.85■■■□□ 2.05
PTP4A3-203ENST00000520105 RCAN3Q9UKA8 241 aa27.85■■■□□ 2.05
PTP4A3-203ENST00000520105 SLC52A2Q9HAB3 445 aa27.84■■■□□ 2.05
PTP4A3-203ENST00000520105 SUPT16HQ9Y5B9 1047 aaKnown RBP27.84■■■□□ 2.05
PTP4A3-203ENST00000520105 BTBD11A6QL63 1104 aa27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 ZNF772Q68DY9 489 aaPredicted RBP27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 MARCH10Q8NA82 808 aaPredicted RBP27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 ELL2O00472 640 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms