RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 CRB1P82279 1406 aa19.47■□□□□ 0.71
PABPC1-210ENST00000519363 RNF123Q5XPI4 1314 aa19.47■□□□□ 0.71
PABPC1-210ENST00000519363 PLEKHO1Q53GL0 409 aaPredicted RBP19.46■□□□□ 0.71
PABPC1-210ENST00000519363 CARD10Q9BWT7 1032 aa19.46■□□□□ 0.71
PABPC1-210ENST00000519363 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
PABPC1-210ENST00000519363 FANCIQ9NVI1 1328 aa19.46■□□□□ 0.71
PABPC1-210ENST00000519363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.45■□□□□ 0.7
PABPC1-210ENST00000519363 RCAN3Q9UKA8 241 aa19.45■□□□□ 0.7
PABPC1-210ENST00000519363 GNAT3A8MTJ3 354 aa19.44■□□□□ 0.7
PABPC1-210ENST00000519363 ZNF853P0CG23 659 aa19.44■□□□□ 0.7
PABPC1-210ENST00000519363 GNAI1P63096 354 aa19.44■□□□□ 0.7
PABPC1-210ENST00000519363 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
PABPC1-210ENST00000519363 SLIT2O94813 1529 aa19.44■□□□□ 0.7
PABPC1-210ENST00000519363 SPATA31A6Q5VVP1 1343 aa19.44■□□□□ 0.7
PABPC1-210ENST00000519363 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
PABPC1-210ENST00000519363 SCN11AQ9UI33 1791 aa19.43■□□□□ 0.7
PABPC1-210ENST00000519363 CT47B1P0C2W7 299 aaPredicted RBP19.43■□□□□ 0.7
PABPC1-210ENST00000519363 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
PABPC1-210ENST00000519363 BTG4Q9NY30 223 aa19.43■□□□□ 0.7
PABPC1-210ENST00000519363 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
PABPC1-210ENST00000519363 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.42■□□□□ 0.7
PABPC1-210ENST00000519363 SIPA1L3O60292 1781 aaPredicted RBP19.42■□□□□ 0.7
PABPC1-210ENST00000519363 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
PABPC1-210ENST00000519363 TOM1L2Q6ZVM7 507 aa19.42■□□□□ 0.7
PABPC1-210ENST00000519363 CFAP44Q96MT7 982 aa19.42■□□□□ 0.7
PABPC1-210ENST00000519363 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
PABPC1-210ENST00000519363 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
PABPC1-210ENST00000519363 AKAP4Q5JQC9 854 aa19.41■□□□□ 0.7
PABPC1-210ENST00000519363 ZNF530Q6P9A1 599 aaPredicted RBP19.41■□□□□ 0.7
PABPC1-210ENST00000519363 GTF3C3Q9Y5Q9 886 aa19.4■□□□□ 0.7
PABPC1-210ENST00000519363 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.7
PABPC1-210ENST00000519363 NEFLP07196 543 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 EVA1CP58658 441 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 DCTN1Q14203 1278 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 LARP1Q6PKG0 1096 aaKnown RBP19.39■□□□□ 0.69
PABPC1-210ENST00000519363 MCM10Q7L590 875 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 TSR2Q969E8 191 aaKnown RBP19.39■□□□□ 0.69
PABPC1-210ENST00000519363 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 SPG7Q9UQ90 795 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 LRP6O75581 1613 aa19.39■□□□□ 0.69
PABPC1-210ENST00000519363 CHL1O00533 1208 aa19.37■□□□□ 0.69
PABPC1-210ENST00000519363 ADAMTS2O95450 1211 aa19.37■□□□□ 0.69
PABPC1-210ENST00000519363 HSPA1LP34931 641 aa19.37■□□□□ 0.69
PABPC1-210ENST00000519363 C1orf141Q5JVX7 400 aa19.37■□□□□ 0.69
PABPC1-210ENST00000519363 BABAM1Q9NWV8 329 aa19.37■□□□□ 0.69
PABPC1-210ENST00000519363 MRC1P22897 1456 aa19.36■□□□□ 0.69
PABPC1-210ENST00000519363 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
PABPC1-210ENST00000519363 NUTM2BA6NNL0 878 aaPredicted RBP19.35■□□□□ 0.69
PABPC1-210ENST00000519363 NUTM2EB1AL46 878 aaPredicted RBP19.35■□□□□ 0.69
PABPC1-210ENST00000519363 IL2RBP14784 551 aa19.35■□□□□ 0.69
PABPC1-210ENST00000519363 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
PABPC1-210ENST00000519363 NUTM2AQ8IVF1 878 aaPredicted RBP19.35■□□□□ 0.69
PABPC1-210ENST00000519363 IL17REQ8NFR9 667 aa19.35■□□□□ 0.69
PABPC1-210ENST00000519363 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
PABPC1-210ENST00000519363 ZNF428Q96B54 188 aa19.34■□□□□ 0.69
PABPC1-210ENST00000519363 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
PABPC1-210ENST00000519363 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
PABPC1-210ENST00000519363 PHKG2P15735 406 aa19.33■□□□□ 0.68
PABPC1-210ENST00000519363 KDM6AO15550 1401 aaPredicted RBP19.33■□□□□ 0.68
PABPC1-210ENST00000519363 IFNL2Q8IZJ0 200 aa19.32■□□□□ 0.68
PABPC1-210ENST00000519363 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
PABPC1-210ENST00000519363 RNMTO43148 476 aaKnown RBP19.31■□□□□ 0.68
PABPC1-210ENST00000519363 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
PABPC1-210ENST00000519363 THRAP3Q9Y2W1 955 aaKnown RBP19.31■□□□□ 0.68
PABPC1-210ENST00000519363 SPATA31A1Q5TZJ5 1347 aa19.3■□□□□ 0.68
PABPC1-210ENST00000519363 BCL9LQ86UU0 1499 aa19.3■□□□□ 0.68
PABPC1-210ENST00000519363 RARSP54136 660 aaKnown RBP19.3■□□□□ 0.68
PABPC1-210ENST00000519363 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
PABPC1-210ENST00000519363 ERICH6BQ5W0A0 696 aa19.3■□□□□ 0.68
PABPC1-210ENST00000519363 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
PABPC1-210ENST00000519363 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
PABPC1-210ENST00000519363 TNS2Q63HR2 1409 aa19.3■□□□□ 0.68
PABPC1-210ENST00000519363 CYP27B1O15528 508 aa19.29■□□□□ 0.68
PABPC1-210ENST00000519363 FNBP4Q8N3X1 1017 aaPredicted RBP19.29■□□□□ 0.68
PABPC1-210ENST00000519363 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.29■□□□□ 0.68
PABPC1-210ENST00000519363 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
PABPC1-210ENST00000519363 SPATA31A5Q5VU36 1347 aa19.28■□□□□ 0.68
PABPC1-210ENST00000519363 SPATA31A7Q8IWB4 1347 aa19.28■□□□□ 0.68
PABPC1-210ENST00000519363 MPRIPQ6WCQ1 1025 aa19.28■□□□□ 0.68
PABPC1-210ENST00000519363 DCAF5Q96JK2 942 aa19.28■□□□□ 0.68
PABPC1-210ENST00000519363 LGR6Q9HBX8 967 aa19.28■□□□□ 0.68
PABPC1-210ENST00000519363 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
PABPC1-210ENST00000519363 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
PABPC1-210ENST00000519363 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
PABPC1-210ENST00000519363 TEFQ10587 303 aa19.27■□□□□ 0.68
PABPC1-210ENST00000519363 FKBP8Q14318 412 aa19.27■□□□□ 0.68
PABPC1-210ENST00000519363 ALDH1L2Q3SY69 923 aa19.27■□□□□ 0.68
PABPC1-210ENST00000519363 UNC5CLQ8IV45 518 aa19.27■□□□□ 0.68
PABPC1-210ENST00000519363 PAPPAQ13219 1627 aa19.26■□□□□ 0.67
PABPC1-210ENST00000519363 NKX1-1Q15270 411 aaPredicted RBP19.26■□□□□ 0.67
PABPC1-210ENST00000519363 VPS72Q15906 364 aa19.25■□□□□ 0.67
PABPC1-210ENST00000519363 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
PABPC1-210ENST00000519363 NGLY1Q96IV0 654 aa19.25■□□□□ 0.67
PABPC1-210ENST00000519363 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
PABPC1-210ENST00000519363 VAMP4O75379 141 aa19.24■□□□□ 0.67
PABPC1-210ENST00000519363 BCAR3O75815 825 aa19.24■□□□□ 0.67
PABPC1-210ENST00000519363 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
PABPC1-210ENST00000519363 BARGINQ6ZT62 677 aa19.24■□□□□ 0.67
PABPC1-210ENST00000519363 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms