RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RNF217Q8TC41 542 aa6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 ZNF395Q9H8N7 513 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 SENP3-EIF4A1A0A087X0R7 540 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 ESPNB1AK53 854 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 ITGA6P23229 1130 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 ADD1P35611 737 aaKnown RBP6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 RAB15P59190 212 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 TRIM34Q9BYJ4 488 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 GOPCQ9HD26 462 aa6.64□□□□□ -1.35
HMGB1P19-201ENST00000517578 ADH1AP07327 375 aa6.63□□□□□ -1.35
HMGB1P19-201ENST00000517578 KCNMA1Q12791 1236 aa6.63□□□□□ -1.35
HMGB1P19-201ENST00000517578 FOXD4L5Q5VV16 416 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P19-201ENST00000517578 POLMQ9NP87 494 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P19-201ENST00000517578 TAF7LQ5H9L4 462 aa6.62□□□□□ -1.35
HMGB1P19-201ENST00000517578 DZIP3Q86Y13 1208 aaKnown RBP6.62□□□□□ -1.35
HMGB1P19-201ENST00000517578 ZNF385CQ66K41 422 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P19-201ENST00000517578 VWA5B2Q8N398 1253 aa6.61□□□□□ -1.35
HMGB1P19-201ENST00000517578 PNMA1Q8ND90 353 aa6.61□□□□□ -1.35
HMGB1P19-201ENST00000517578 CDC14CA4D256 554 aa6.6□□□□□ -1.35
HMGB1P19-201ENST00000517578 SLURP2P0DP57 97 aa6.6□□□□□ -1.35
HMGB1P19-201ENST00000517578 PTGIRP43119 386 aa6.6□□□□□ -1.35
HMGB1P19-201ENST00000517578 WHAMMQ8TF30 809 aa6.6□□□□□ -1.35
HMGB1P19-201ENST00000517578 ADAMTS8Q9UP79 889 aa6.6□□□□□ -1.35
HMGB1P19-201ENST00000517578 FGD1P98174 961 aa6.59□□□□□ -1.35
HMGB1P19-201ENST00000517578 SV2AQ7L0J3 742 aa6.59□□□□□ -1.35
HMGB1P19-201ENST00000517578 GJD4Q96KN9 370 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P19-201ENST00000517578 CYLDQ9NQC7 956 aa6.59□□□□□ -1.35
HMGB1P19-201ENST00000517578 CDK11AQ9UQ88 783 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P19-201ENST00000517578 HOMEZQ8IX15 550 aa6.58□□□□□ -1.36
HMGB1P19-201ENST00000517578 SEPT12Q8IYM1 358 aa6.58□□□□□ -1.36
HMGB1P19-201ENST00000517578 CUEDC1Q9NWM3 386 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P19-201ENST00000517578 USP35Q9P2H5 1018 aa6.58□□□□□ -1.36
HMGB1P19-201ENST00000517578 TMEM259Q4ZIN3 620 aa6.57□□□□□ -1.36
HMGB1P19-201ENST00000517578 SVOPQ8N4V2 548 aa6.57□□□□□ -1.36
HMGB1P19-201ENST00000517578 KCTD17Q8N5Z5 321 aa6.57□□□□□ -1.36
HMGB1P19-201ENST00000517578 CCDC136Q96JN2 1154 aa6.57□□□□□ -1.36
HMGB1P19-201ENST00000517578 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 SUPT5HO00267 1087 aaKnown RBP6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 GIGYF1O75420 1035 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 ARHGEF15O94989 841 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 FBXO45P0C2W1 286 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 RASSF7Q02833 373 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 GAS6Q14393 721 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 LYSMD3Q7Z3D4 306 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 ZMYND15Q9H091 742 aa6.56□□□□□ -1.36
HMGB1P19-201ENST00000517578 NCLP19338 710 aaKnown RBP6.55□□□□□ -1.36
HMGB1P19-201ENST00000517578 RNF144AP50876 292 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P19-201ENST00000517578 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 ATP5J2-PTCD1G3V325 749 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 RNF225M0QZC1 329 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 GPR37L1O60883 481 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 ADAMTS2O95450 1211 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 RHOQP17081 205 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 PRICKLE2Q7Z3G6 844 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 TMEM151AQ8N4L1 468 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 PCDHB9Q9Y5E1 797 aa6.54□□□□□ -1.36
HMGB1P19-201ENST00000517578 GDF11O95390 407 aa6.53□□□□□ -1.36
HMGB1P19-201ENST00000517578 ERVK-9P63128 1117 aa6.53□□□□□ -1.36
HMGB1P19-201ENST00000517578 ZNF837Q96EG3 531 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P19-201ENST00000517578 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
HMGB1P19-201ENST00000517578 SRSF11Q05519 484 aaKnown RBP6.52□□□□□ -1.37
HMGB1P19-201ENST00000517578 LYPD4Q6UWN0 246 aa6.52□□□□□ -1.37
HMGB1P19-201ENST00000517578 SNRKQ9NRH2 765 aa6.52□□□□□ -1.37
HMGB1P19-201ENST00000517578 A0A1W2PRU2 124 aa6.51□□□□□ -1.37
HMGB1P19-201ENST00000517578 GPC1P35052 558 aa6.51□□□□□ -1.37
HMGB1P19-201ENST00000517578 SCTRP47872 440 aa6.51□□□□□ -1.37
HMGB1P19-201ENST00000517578 CC2D2BQ6DHV5 1058 aa6.51□□□□□ -1.37
HMGB1P19-201ENST00000517578 MEN1O00255 615 aa6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 AAMPQ13685 434 aa6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 SUZ12Q15022 739 aaKnown RBP6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 DBN1Q16643 649 aa6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 TRIM22Q8IYM9 498 aa6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 BANK1Q8NDB2 785 aa6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 NOP58Q9Y2X3 529 aaKnown RBP6.5□□□□□ -1.37
HMGB1P19-201ENST00000517578 GPR25O00155 361 aa6.49□□□□□ -1.37
HMGB1P19-201ENST00000517578 CELA2BP08218 269 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P19-201ENST00000517578 IRS1P35568 1242 aa6.49□□□□□ -1.37
HMGB1P19-201ENST00000517578 NR1H3Q13133 447 aa6.49□□□□□ -1.37
HMGB1P19-201ENST00000517578 CCDC125Q86Z20 511 aa6.49□□□□□ -1.37
HMGB1P19-201ENST00000517578 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
HMGB1P19-201ENST00000517578 TRAK2O60296 914 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 POU4F2Q12837 409 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 CLN3Q13286 438 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 TMEM132AQ24JP5 1023 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 MTMR14Q8NCE2 650 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 GMCL1Q96IK5 515 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 GRIP2Q9C0E4 1043 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 OSBPL3Q9H4L5 887 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 MBIPQ9NS73 344 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 DYRK1BQ9Y463 629 aa6.48□□□□□ -1.37
HMGB1P19-201ENST00000517578 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 SOCS7O14512 581 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 MARSP56192 900 aaKnown RBP6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 NBPF10Q6P3W6 841 aaKnown RBP6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 RIPOR1Q6ZS17 1223 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 CYP2U1Q7Z449 544 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms