RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 PHF24Q9UPV7 400 aa3.18□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ZC3H4Q9UPT8 1303 aaKnown RBP3.18□□□□□ -1.9
RNU6-1258P-201ENST00000516911 GTF2E1P29083 439 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1258P-201ENST00000516911 TUSC1Q2TAM9 212 aa3.17□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ZNF837Q96EG3 531 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1258P-201ENST00000516911 PSMG3-AS1Q96PY0 264 aa3.17□□□□□ -1.9
RNU6-1258P-201ENST00000516911 TMPRSS4Q9NRS4 437 aa3.17□□□□□ -1.9
RNU6-1258P-201ENST00000516911 LRRC4BQ9NT99 713 aa3.17□□□□□ -1.9
RNU6-1258P-201ENST00000516911 SENP3-EIF4A1A0A087X0R7 540 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ATP5J2-PTCD1G3V325 749 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 OIP5O43482 229 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ZMYND10O75800 440 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 CLK2P49760 499 aaKnown RBP3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 RNF144AP50876 292 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 CTDSPL2Q05D32 466 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 GAS6Q14393 721 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 GRIN2CQ14957 1233 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 DBN1Q16643 649 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 QPCTQ16769 361 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 RTL5Q5HYW3 569 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 MYSM1Q5VVJ2 828 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 PARP9Q8IXQ6 854 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 VSIG10Q8N0Z9 540 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ZNF784Q8NCA9 323 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ADAM32Q8TC27 787 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 ACDQ96AP0 544 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 AK7Q96M32 723 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 OXCT2Q9BYC2 517 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 POLR3EQ9NVU0 708 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 LIMD1Q9UGP4 676 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 DYRK1BQ9Y463 629 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 GPSM3Q9Y4H4 160 aa3.16□□□□□ -1.9
RNU6-1258P-201ENST00000516911 SCO2A0A1W2PP80 73 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ERVH48-1M5A8F1 160 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 PROCP04070 461 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GPC1P35052 558 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 POU4F2Q12837 409 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 NR6A1Q15406 480 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 FOXD4L5Q5VV16 416 aaPredicted RBP3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 PPP2R2DQ66LE6 453 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 NUCKS1Q9H1E3 243 aaKnown RBP3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 TIMMDC1Q9NPL8 285 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CYLDQ9NQC7 956 aa3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 NOP53Q9NZM5 478 aaKnown RBP3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GDF2Q9UK05 429 aaPredicted RBP3.15□□□□□ -1.91
RNU6-1258P-201ENST00000516911 TRIM66O15016 1216 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 F11P03951 625 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CSB-PGBD3P0DP91 1061 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CCDC125Q86Z20 511 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 SEPT12Q8IYM1 358 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 PGBD3Q8N328 593 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ZC3H15Q8WU90 426 aaKnown RBP3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 EDARADDQ8WWZ3 215 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CFHR5Q9BXR6 569 aa3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CUEDC1Q9NWM3 386 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1258P-201ENST00000516911 KRBA1A5PL33 1030 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 BMP4P12644 408 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ADD1P35611 737 aaKnown RBP3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ZMYM1Q5SVZ6 1142 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 RNF20Q5VTR2 975 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 TAS1R3Q7RTX0 852 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 NBPF11Q86T75 865 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GOLGA6L1Q8N7Z2 621 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 LRRN4Q8WUT4 740 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 SEMA6BQ9H3T3 888 aa3.13□□□□□ -1.91
RNU6-1258P-201ENST00000516911 A0A1W2PRU2 124 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GNB5O14775 395 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 LILRA1O75019 489 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 AP1G2O75843 785 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 SNRPNP63162 240 aaKnown RBP3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 PDE4DQ08499 809 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 WDR44Q5JSH3 913 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 EFHC2Q5JST6 749 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CYP2U1Q7Z449 544 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ZNF592Q92610 1267 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 KLRG1Q96E93 195 aa3.12□□□□□ -1.91
RNU6-1258P-201ENST00000516911 C1QTNF9BB2RNN3 333 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ITGB2P05107 769 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GATA4P43694 442 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GNASQ5JWF2 1037 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CC2D2BQ6DHV5 1058 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 NBPF10Q6P3W6 841 aaKnown RBP3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 NBPF15Q8N660 670 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GPAMQ9HCL2 828 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 ZNF330Q9Y3S2 320 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 PCDHB9Q9Y5E1 797 aa3.11□□□□□ -1.91
RNU6-1258P-201ENST00000516911 SPDYE3A6NKU9 549 aa3.1□□□□□ -1.91
RNU6-1258P-201ENST00000516911 WASLO00401 505 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1258P-201ENST00000516911 DOC2BQ14184 412 aa3.1□□□□□ -1.91
RNU6-1258P-201ENST00000516911 TMEM214Q6NUQ4 689 aaKnown RBP3.1□□□□□ -1.91
RNU6-1258P-201ENST00000516911 SHISA8B8ZZ34 492 aa3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 GIGYF1O75420 1035 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 APBA3O96018 575 aa3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 MYCP01106 439 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 COL8A1P27658 744 aa3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 PHKA2P46019 1235 aa3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 MCCD1P59942 119 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 CLN3Q13286 438 aa3.09□□□□□ -1.91
RNU6-1258P-201ENST00000516911 LBRQ14739 615 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms