RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 FAM196BA6NMK8 535 aa12.12□□□□□ -0.47
SNORA48.9-201ENST00000516419 LILRA1O75019 489 aa12.12□□□□□ -0.47
SNORA48.9-201ENST00000516419 GTF2IP78347 998 aa12.12□□□□□ -0.47
SNORA48.9-201ENST00000516419 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
SNORA48.9-201ENST00000516419 KLF16Q9BXK1 252 aaPredicted RBP12.12□□□□□ -0.47
SNORA48.9-201ENST00000516419 WDR4P57081 412 aaKnown RBP12.11□□□□□ -0.47
SNORA48.9-201ENST00000516419 DNAAF2Q9NVR5 837 aaKnown RBP12.11□□□□□ -0.47
SNORA48.9-201ENST00000516419 PCDHGA11Q9Y5H2 935 aa12.11□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L21D6R901 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 ZIC2O95409 532 aaPredicted RBP12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 CLDN10P78369 228 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 ELOAQ14241 798 aaKnown RBP12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 HPS1Q92902 700 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 OSBPL3Q9H4L5 887 aa12.1□□□□□ -0.47
SNORA48.9-201ENST00000516419 PTK7Q13308 1070 aa12.09□□□□□ -0.47
SNORA48.9-201ENST00000516419 CRTC2Q53ET0 693 aaPredicted RBP12.09□□□□□ -0.47
SNORA48.9-201ENST00000516419 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
SNORA48.9-201ENST00000516419 TIMP2P16035 220 aa12.08□□□□□ -0.48
SNORA48.9-201ENST00000516419 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
SNORA48.9-201ENST00000516419 CYP2U1Q7Z449 544 aa12.07□□□□□ -0.48
SNORA48.9-201ENST00000516419 ZFAND3Q9H8U3 227 aa12.07□□□□□ -0.48
SNORA48.9-201ENST00000516419 NOVA2Q9UNW9 492 aaKnown RBP12.07□□□□□ -0.48
SNORA48.9-201ENST00000516419 FAM187AA6NFU0 413 aa12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 GFRA3O60609 400 aa12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 PSME1Q06323 249 aa12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 Q6ZVU0 165 aa12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 SIX5Q8N196 739 aa12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
SNORA48.9-201ENST00000516419 NRG2O14511 850 aaPredicted RBP12.05□□□□□ -0.48
SNORA48.9-201ENST00000516419 ANKMY2Q8IV38 441 aa12.05□□□□□ -0.48
SNORA48.9-201ENST00000516419 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
SNORA48.9-201ENST00000516419 KIAA1024Q9UPX6 916 aa12.05□□□□□ -0.48
SNORA48.9-201ENST00000516419 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
SNORA48.9-201ENST00000516419 ADH1AP07327 375 aa12.04□□□□□ -0.48
SNORA48.9-201ENST00000516419 PDE4CQ08493 712 aa12.04□□□□□ -0.48
SNORA48.9-201ENST00000516419 CBLBQ13191 982 aa12.04□□□□□ -0.48
SNORA48.9-201ENST00000516419 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
SNORA48.9-201ENST00000516419 DGAT1O75907 488 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 GNRH1P01148 92 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 AVPP01185 164 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 LAPTM4AQ15012 233 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 TPCN2Q8NHX9 752 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 FAM200AQ8TCP9 573 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 ZMIZ1Q9ULJ6 1067 aa12.03□□□□□ -0.48
SNORA48.9-201ENST00000516419 CAPN5O15484 640 aaPredicted RBP12.02□□□□□ -0.49
SNORA48.9-201ENST00000516419 DKK1O94907 266 aa12.02□□□□□ -0.49
SNORA48.9-201ENST00000516419 DPYDQ12882 1025 aa12.02□□□□□ -0.49
SNORA48.9-201ENST00000516419 USTQ9Y2C2 406 aa12.02□□□□□ -0.49
SNORA48.9-201ENST00000516419 SEC13P55735 322 aa12□□□□□ -0.49
SNORA48.9-201ENST00000516419 PKDCCQ504Y2 493 aa12□□□□□ -0.49
SNORA48.9-201ENST00000516419 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
SNORA48.9-201ENST00000516419 MEIOBQ8N635 442 aa12□□□□□ -0.49
SNORA48.9-201ENST00000516419 WASLO00401 505 aaPredicted RBP11.99□□□□□ -0.49
SNORA48.9-201ENST00000516419 PTGIRP43119 386 aa11.99□□□□□ -0.49
SNORA48.9-201ENST00000516419 STK32AQ8WU08 396 aa11.99□□□□□ -0.49
SNORA48.9-201ENST00000516419 TMEM229AB2RXF0 380 aa11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 SCNN1DP51172 638 aa11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 GDF10P55107 478 aa11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 CTC1Q2NKJ3 1217 aa11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 TMEM164Q5U3C3 297 aa11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 KDF1Q8NAX2 398 aaPredicted RBP11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 ETNK1Q9HBU6 452 aa11.98□□□□□ -0.49
SNORA48.9-201ENST00000516419 SFI1A8K8P3 1242 aa11.97□□□□□ -0.49
SNORA48.9-201ENST00000516419 M0R2N6 131 aa11.97□□□□□ -0.49
SNORA48.9-201ENST00000516419 INHAP05111 366 aa11.97□□□□□ -0.49
SNORA48.9-201ENST00000516419 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNORA48.9-201ENST00000516419 AGBL1Q96MI9 1066 aa11.97□□□□□ -0.49
SNORA48.9-201ENST00000516419 ARHGEF10LQ9HCE6 1279 aa11.97□□□□□ -0.49
SNORA48.9-201ENST00000516419 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.49
SNORA48.9-201ENST00000516419 BACH1O14867 736 aa11.96□□□□□ -0.49
SNORA48.9-201ENST00000516419 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.49
SNORA48.9-201ENST00000516419 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
SNORA48.9-201ENST00000516419 ZNF358Q9NW07 568 aa11.96□□□□□ -0.49
SNORA48.9-201ENST00000516419 A0A1W2PRU2 124 aa11.95□□□□□ -0.5
SNORA48.9-201ENST00000516419 STAU1O95793 577 aaKnown RBP11.95□□□□□ -0.5
SNORA48.9-201ENST00000516419 RELBQ01201 579 aa11.95□□□□□ -0.5
SNORA48.9-201ENST00000516419 XAGE2Q96GT9 111 aa11.95□□□□□ -0.5
SNORA48.9-201ENST00000516419 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
SNORA48.9-201ENST00000516419 UPP2O95045 317 aa11.94□□□□□ -0.5
SNORA48.9-201ENST00000516419 PDIA4P13667 645 aaKnown RBP11.94□□□□□ -0.5
SNORA48.9-201ENST00000516419 CLN3Q13286 438 aa11.94□□□□□ -0.5
SNORA48.9-201ENST00000516419 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
SNORA48.9-201ENST00000516419 RAB6BQ9NRW1 208 aa11.94□□□□□ -0.5
SNORA48.9-201ENST00000516419 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
SNORA48.9-201ENST00000516419 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
SNORA48.9-201ENST00000516419 ESYT1Q9BSJ8 1104 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms