RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
DHFR-206ENST00000513048 POTEHQ6S545 545 aa12.27□□□□□ -0.45
DHFR-206ENST00000513048 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
DHFR-206ENST00000513048 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
DHFR-206ENST00000513048 E9PSI1 815 aa12.26□□□□□ -0.45
DHFR-206ENST00000513048 IL16Q14005 1332 aa12.26□□□□□ -0.45
DHFR-206ENST00000513048 JCADQ9P266 1359 aa12.26□□□□□ -0.45
DHFR-206ENST00000513048 NRAPQ86VF7 1730 aa12.25□□□□□ -0.45
DHFR-206ENST00000513048 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
DHFR-206ENST00000513048 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
DHFR-206ENST00000513048 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
DHFR-206ENST00000513048 MEGF6O75095 1541 aa12.25□□□□□ -0.45
DHFR-206ENST00000513048 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
DHFR-206ENST00000513048 ZBTB22O15209 634 aa12.24□□□□□ -0.45
DHFR-206ENST00000513048 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
DHFR-206ENST00000513048 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
DHFR-206ENST00000513048 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
DHFR-206ENST00000513048 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
DHFR-206ENST00000513048 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
DHFR-206ENST00000513048 CRB1P82279 1406 aa12.23□□□□□ -0.45
DHFR-206ENST00000513048 ZNF853P0CG23 659 aa12.23□□□□□ -0.45
DHFR-206ENST00000513048 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
DHFR-206ENST00000513048 HSPA1LP34931 641 aa12.23□□□□□ -0.45
DHFR-206ENST00000513048 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
DHFR-206ENST00000513048 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
DHFR-206ENST00000513048 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
DHFR-206ENST00000513048 LRP6O75581 1613 aa12.22□□□□□ -0.45
DHFR-206ENST00000513048 SLIT2O94813 1529 aa12.22□□□□□ -0.45
DHFR-206ENST00000513048 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
DHFR-206ENST00000513048 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
DHFR-206ENST00000513048 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
DHFR-206ENST00000513048 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
DHFR-206ENST00000513048 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
DHFR-206ENST00000513048 OVOS2A0A0G2JMS6 1433 aa12.21□□□□□ -0.45
DHFR-206ENST00000513048 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
DHFR-206ENST00000513048 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
DHFR-206ENST00000513048 PARP4Q9UKK3 1724 aaKnown RBP12.21□□□□□ -0.45
DHFR-206ENST00000513048 AMOTQ4VCS5 1084 aa12.21□□□□□ -0.45
DHFR-206ENST00000513048 PLEKHO1Q53GL0 409 aaPredicted RBP12.21□□□□□ -0.45
DHFR-206ENST00000513048 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
DHFR-206ENST00000513048 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
DHFR-206ENST00000513048 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 MCM10Q7L590 875 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
DHFR-206ENST00000513048 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 STRN4Q9NRL3 753 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.467e-43■■□□□ 14
DHFR-206ENST00000513048 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
DHFR-206ENST00000513048 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
DHFR-206ENST00000513048 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 DISP2A7MBM2 1401 aa12.2□□□□□ -0.46
DHFR-206ENST00000513048 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
DHFR-206ENST00000513048 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
DHFR-206ENST00000513048 TATP17735 454 aaPredicted RBP12.19□□□□□ -0.46
DHFR-206ENST00000513048 EVA1CP58658 441 aa12.19□□□□□ -0.46
DHFR-206ENST00000513048 CALD1Q05682 793 aaKnown RBP12.19□□□□□ -0.46
DHFR-206ENST00000513048 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
DHFR-206ENST00000513048 TSR2Q969E8 191 aaKnown RBP12.19□□□□□ -0.46
DHFR-206ENST00000513048 RCAN3Q9UKA8 241 aa12.19□□□□□ -0.46
DHFR-206ENST00000513048 CHL1O00533 1208 aa12.18□□□□□ -0.46
DHFR-206ENST00000513048 GNAI1P63096 354 aa12.18□□□□□ -0.46
DHFR-206ENST00000513048 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
DHFR-206ENST00000513048 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
DHFR-206ENST00000513048 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
DHFR-206ENST00000513048 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
DHFR-206ENST00000513048 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
DHFR-206ENST00000513048 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
DHFR-206ENST00000513048 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
DHFR-206ENST00000513048 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
DHFR-206ENST00000513048 IL2RBP14784 551 aa12.16□□□□□ -0.46
DHFR-206ENST00000513048 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
DHFR-206ENST00000513048 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
DHFR-206ENST00000513048 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
DHFR-206ENST00000513048 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
DHFR-206ENST00000513048 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
DHFR-206ENST00000513048 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.16□□□□□ -0.46
DHFR-206ENST00000513048 CYP27B1O15528 508 aa12.15□□□□□ -0.46
DHFR-206ENST00000513048 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
DHFR-206ENST00000513048 PHKG2P15735 406 aa12.15□□□□□ -0.46
DHFR-206ENST00000513048 FNBP4Q8N3X1 1017 aaPredicted RBP12.15□□□□□ -0.46
DHFR-206ENST00000513048 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
DHFR-206ENST00000513048 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
DHFR-206ENST00000513048 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
DHFR-206ENST00000513048 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
DHFR-206ENST00000513048 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
DHFR-206ENST00000513048 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
DHFR-206ENST00000513048 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
DHFR-206ENST00000513048 MRC1P22897 1456 aa12.14□□□□□ -0.47
DHFR-206ENST00000513048 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
DHFR-206ENST00000513048 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
DHFR-206ENST00000513048 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
DHFR-206ENST00000513048 ZCRB1Q8TBF4 217 aaKnown RBP12.13□□□□□ -0.47
DHFR-206ENST00000513048 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
DHFR-206ENST00000513048 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
DHFR-206ENST00000513048 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms