RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 LARGE2Q8N3Y3 721 aa7.45□□□□□ -1.22
HTT-210ENST00000512909 MPNDQ8N594 471 aa7.45□□□□□ -1.22
HTT-210ENST00000512909 SNIP1Q8TAD8 396 aaKnown RBP7.45□□□□□ -1.22
HTT-210ENST00000512909 CDK15Q96Q40 435 aa7.45□□□□□ -1.22
HTT-210ENST00000512909 TRAIPQ9BWF2 469 aa7.45□□□□□ -1.22
HTT-210ENST00000512909 EMILIN1Q9Y6C2 1016 aa7.45□□□□□ -1.22
HTT-210ENST00000512909 TRAF7Q6Q0C0 670 aa7.44□□□□□ -1.22
HTT-210ENST00000512909 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
HTT-210ENST00000512909 CDCA7Q9BWT1 371 aaPredicted RBP7.44□□□□□ -1.22
HTT-210ENST00000512909 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
HTT-210ENST00000512909 SEC13P55735 322 aa7.43□□□□□ -1.22
HTT-210ENST00000512909 DPYDQ12882 1025 aa7.43□□□□□ -1.22
HTT-210ENST00000512909 ELOAQ14241 798 aaKnown RBP7.43□□□□□ -1.22
HTT-210ENST00000512909 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
HTT-210ENST00000512909 CYP2U1Q7Z449 544 aa7.43□□□□□ -1.22
HTT-210ENST00000512909 TPCN2Q8NHX9 752 aa7.43□□□□□ -1.22
HTT-210ENST00000512909 HINFPQ9BQA5 517 aa7.43□□□□□ -1.22
HTT-210ENST00000512909 TNFRSF10AO00220 468 aa7.42□□□□□ -1.22
HTT-210ENST00000512909 GTF2E1P29083 439 aaPredicted RBP7.42□□□□□ -1.22
HTT-210ENST00000512909 NNTQ13423 1086 aa7.42□□□□□ -1.22
HTT-210ENST00000512909 TSGA10IPQ3SY00 556 aa7.42□□□□□ -1.22
HTT-210ENST00000512909 ESCO1Q5FWF5 840 aa7.42□□□□□ -1.22
HTT-210ENST00000512909 PPP1R26Q5T8A7 1209 aaPredicted RBP7.42□□□□□ -1.22
HTT-210ENST00000512909 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
HTT-210ENST00000512909 BACH1O14867 736 aa7.41□□□□□ -1.22
HTT-210ENST00000512909 CRTC2Q53ET0 693 aaPredicted RBP7.41□□□□□ -1.22
HTT-210ENST00000512909 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
HTT-210ENST00000512909 MTMR7Q9Y216 660 aa7.41□□□□□ -1.22
HTT-210ENST00000512909 SIAH2O43255 324 aa7.4□□□□□ -1.22
HTT-210ENST00000512909 PTK7Q13308 1070 aa7.4□□□□□ -1.22
HTT-210ENST00000512909 UPP2O95045 317 aa7.39□□□□□ -1.23
HTT-210ENST00000512909 GRM5P41594 1212 aa7.39□□□□□ -1.23
HTT-210ENST00000512909 SRPK2P78362 688 aaKnown RBP7.39□□□□□ -1.23
HTT-210ENST00000512909 ZNF784Q8NCA9 323 aaPredicted RBP7.39□□□□□ -1.23
HTT-210ENST00000512909 VTI1AQ96AJ9 217 aa7.39□□□□□ -1.23
HTT-210ENST00000512909 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
HTT-210ENST00000512909 BRD1O95696 1058 aa7.38□□□□□ -1.23
HTT-210ENST00000512909 WDR4P57081 412 aaKnown RBP7.38□□□□□ -1.23
HTT-210ENST00000512909 ERVK-9P63128 1117 aa7.38□□□□□ -1.23
HTT-210ENST00000512909 CLDN10P78369 228 aa7.38□□□□□ -1.23
HTT-210ENST00000512909 TMEM164Q5U3C3 297 aa7.38□□□□□ -1.23
HTT-210ENST00000512909 STK32AQ8WU08 396 aa7.38□□□□□ -1.23
HTT-210ENST00000512909 NLRP3Q96P20 1036 aa7.38□□□□□ -1.23
HTT-210ENST00000512909 ZIC2O95409 532 aaPredicted RBP7.37□□□□□ -1.23
HTT-210ENST00000512909 SWI5Q1ZZU3 235 aa7.37□□□□□ -1.23
HTT-210ENST00000512909 SIX5Q8N196 739 aa7.37□□□□□ -1.23
HTT-210ENST00000512909 EMID1Q96A84 441 aaPredicted RBP7.37□□□□□ -1.23
HTT-210ENST00000512909 SFI1A8K8P3 1242 aa7.36□□□□□ -1.23
HTT-210ENST00000512909 GNRH1P01148 92 aa7.36□□□□□ -1.23
HTT-210ENST00000512909 SCTRP47872 440 aa7.36□□□□□ -1.23
HTT-210ENST00000512909 GDF10P55107 478 aa7.36□□□□□ -1.23
HTT-210ENST00000512909 KCNA1Q09470 495 aa7.36□□□□□ -1.23
HTT-210ENST00000512909 CCER1Q8TC90 406 aaPredicted RBP7.36□□□□□ -1.23
HTT-210ENST00000512909 PKD2L1Q9P0L9 805 aa7.36□□□□□ -1.23
HTT-210ENST00000512909 ATP2B4P23634 1241 aa7.35□□□□□ -1.23
HTT-210ENST00000512909 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.35□□□□□ -1.23
HTT-210ENST00000512909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.23
HTT-210ENST00000512909 PODXL2Q9NZ53 605 aa7.35□□□□□ -1.23
HTT-210ENST00000512909 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
HTT-210ENST00000512909 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
HTT-210ENST00000512909 PDZRN3Q9UPQ7 1066 aa7.35□□□□□ -1.23
HTT-210ENST00000512909 PCDHGA11Q9Y5H2 935 aa7.35□□□□□ -1.23
HTT-210ENST00000512909 J3QL48 77 aa7.34□□□□□ -1.23
HTT-210ENST00000512909 MEN1O00255 615 aa7.34□□□□□ -1.23
HTT-210ENST00000512909 ADH1AP07327 375 aa7.34□□□□□ -1.23
HTT-210ENST00000512909 NR3C2P08235 984 aa7.34□□□□□ -1.23
HTT-210ENST00000512909 OSBPL3Q9H4L5 887 aa7.34□□□□□ -1.23
HTT-210ENST00000512909 CARNS1A5YM72 827 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 FAM187AA6NFU0 413 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 ZBTB7BO15156 539 aaPredicted RBP7.33□□□□□ -1.24
HTT-210ENST00000512909 GDF9O60383 454 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 PRMT3O60678 531 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 RELBQ01201 579 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 CLP1Q92989 425 aaKnown RBP7.33□□□□□ -1.24
HTT-210ENST00000512909 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 KIAA1024Q9UPX6 916 aa7.33□□□□□ -1.24
HTT-210ENST00000512909 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 M0R2N6 131 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 PRR20EP86478 221 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 PRR20CP86479 221 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 PRR20DP86480 221 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 PRR20BP86481 221 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 PRR20AP86496 221 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 TRIM26Q12899 539 aaPredicted RBP7.32□□□□□ -1.24
HTT-210ENST00000512909 NBPF15Q8N660 670 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 CHMP7Q8WUX9 453 aaPredicted RBP7.32□□□□□ -1.24
HTT-210ENST00000512909 RAB6BQ9NRW1 208 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 ZNF358Q9NW07 568 aa7.32□□□□□ -1.24
HTT-210ENST00000512909 CAPN5O15484 640 aaPredicted RBP7.31□□□□□ -1.24
HTT-210ENST00000512909 INHAP05111 366 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 ARID4AP29374 1257 aaPredicted RBP7.31□□□□□ -1.24
HTT-210ENST00000512909 TLR1Q15399 786 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 PKDCCQ504Y2 493 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 SLC27A3Q5K4L6 730 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 Q6ZNB5 142 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 TSEN2Q8NCE0 465 aaKnown RBP7.31□□□□□ -1.24
HTT-210ENST00000512909 ITPKCQ96DU7 683 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 PRIMPOLQ96LW4 560 aa7.31□□□□□ -1.24
HTT-210ENST00000512909 LILRA1O75019 489 aa7.3□□□□□ -1.24
HTT-210ENST00000512909 PTGIRP43119 386 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms