RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 MARCH6O60337 910 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 IMPDH2P12268 514 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 GPS2Q13227 327 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 UBA5Q9GZZ9 404 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 SPATS2LQ9NUQ6 558 aaKnown RBP7.35□□□□□ -1.23
PDE4D-216ENST00000507116 ABCF2Q9UG63 623 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 BLOC1S6Q9UL45 172 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 PPME1Q9Y570 386 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 PEX19P40855 299 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 RPS6KA3P51812 740 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 ICA1Q05084 483 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 NCAPG2Q86XI2 1143 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 NUTM1Q86Y26 1132 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 CACTIN-AS1Q8N1I8 211 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 C17orf50Q8WW18 174 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
PDE4D-216ENST00000507116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.35□□□□□ -1.23
PDE4D-216ENST00000507116 KIAA1107Q9UPP5 1409 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 NCBP1Q09161 790 aaKnown RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CCDC186Q7Z3E2 898 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 PRPF38AQ8NAV1 312 aaKnown RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 GIMAP7Q8NHV1 300 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CFAP53Q96M91 514 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CRACR2AQ9BSW2 395 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 VIRMAQ69YN4 1812 aaKnown RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 KIF4AO95239 1232 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 FAM200BP0CF97 657 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 USP8P40818 1118 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 DRAXINQ8NBI3 349 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 STAG1Q8WVM7 1258 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 RIOK3O14730 519 aaKnown RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 ZNF445P59923 1031 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CCDC15Q0P6D6 951 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 SLC5A9Q2M3M2 681 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CCDC30Q5VVM6 783 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CENPQQ7L2Z9 268 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 CCDC34Q96HJ3 373 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 AGAP3Q96P47 875 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 SLX1AQ9BQ83 275 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 SPTLC3Q9NUV7 552 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 UTP6Q9NYH9 597 aaKnown RBP7.34□□□□□ -1.23
PDE4D-216ENST00000507116 LCMT1Q9UIC8 334 aa7.34□□□□□ -1.23
PDE4D-216ENST00000507116 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 IFT88Q13099 833 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 TBC1D25Q3MII6 688 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 LEKR1Q6ZMV7 388 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 MYLK4Q86YV6 388 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 TEX11Q8IYF3 940 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 RNF214Q8ND24 703 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 SLC24A3Q9HC58 644 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 PSMC1P62191 440 aaKnown RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 NUCB2P80303 420 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 C16orf87Q6PH81 154 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 TAX1BP1Q86VP1 789 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 RBM12BQ8IXT5 1001 aaKnown RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 TDRD7Q8NHU6 1098 aaKnown RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 GPT2Q8TD30 523 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 KIF1BPQ96EK5 621 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 USP19O94966 1318 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 U2SURPO15042 1029 aaKnown RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 SMARCA5O60264 1052 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 TBC1D2Q9BYX2 928 aa7.33□□□□□ -1.24
PDE4D-216ENST00000507116 TRIM6Q9C030 488 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-216ENST00000507116 ARID3CA6NKF2 412 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 TBC1D8BQ0IIM8 1120 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 MROH2BQ7Z745 1585 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 PHC3Q8NDX5 983 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 ZNF397Q8NF99 534 aaPredicted RBP7.32□□□□□ -1.24
PDE4D-216ENST00000507116 GOLGA5Q8TBA6 731 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 DNAAF4Q8WXU2 420 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDE4D-216ENST00000507116 EXOC5O00471 708 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 SNUPNO95149 360 aaKnown RBP7.32□□□□□ -1.24
PDE4D-216ENST00000507116 CPP00450 1065 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 TMCO4Q5TGY1 634 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 HHATQ5VTY9 493 aa7.32□□□□□ -1.24
PDE4D-216ENST00000507116 LRRFIP2Q9Y608 721 aaKnown RBP7.32□□□□□ -1.24
PDE4D-216ENST00000507116 FLT3P36888 993 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 GRIK3Q13003 919 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 CCDC178Q5BJE1 867 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 ANKRD13AQ8IZ07 590 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 SMCR8Q8TEV9 937 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-216ENST00000507116 ZNF483Q8TF39 744 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-216ENST00000507116 TRAK1Q9UPV9 953 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 ARMC2Q8NEN0 867 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 FBXO18Q8NFZ0 1043 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 SGSM2O43147 1006 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 PPFIA4O75335 1185 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 ALDH1B1P30837 517 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 PRPHP41219 470 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 ZRSR1Q15695 479 aaKnown RBP7.31□□□□□ -1.24
PDE4D-216ENST00000507116 RWDD1Q9H446 243 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-216ENST00000507116 PNMA2Q9UL42 364 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 SUGT1Q9Y2Z0 365 aa7.31□□□□□ -1.24
PDE4D-216ENST00000507116 TPM4P67936 248 aa7.3□□□□□ -1.24
PDE4D-216ENST00000507116 KLHL40Q2TBA0 621 aa7.3□□□□□ -1.24
PDE4D-216ENST00000507116 IQCF2Q8IXL9 164 aa7.3□□□□□ -1.24
PDE4D-216ENST00000507116 ARHGEF10LQ9HCE6 1279 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms