RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 ZFP42Q96MM3 310 aa6.26□□□□□ -1.41
ATXN3-208ENST00000504047 CDCA7Q9BWT1 371 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-208ENST00000504047 GMPR2Q9P2T1 348 aaKnown RBP6.26□□□□□ -1.41
ATXN3-208ENST00000504047 PIK3CDO00329 1044 aa6.25□□□□□ -1.41
ATXN3-208ENST00000504047 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
ATXN3-208ENST00000504047 SCTRP47872 440 aa6.25□□□□□ -1.41
ATXN3-208ENST00000504047 TRIM47Q96LD4 638 aa6.25□□□□□ -1.41
ATXN3-208ENST00000504047 AGBL1Q96MI9 1066 aa6.25□□□□□ -1.41
ATXN3-208ENST00000504047 USP17L5A8MUK1 530 aa6.24□□□□□ -1.41
ATXN3-208ENST00000504047 ATP9BO43861 1147 aa6.24□□□□□ -1.41
ATXN3-208ENST00000504047 PTGIRP43119 386 aa6.24□□□□□ -1.41
ATXN3-208ENST00000504047 TSGA10IPQ3SY00 556 aa6.24□□□□□ -1.41
ATXN3-208ENST00000504047 ZNF395Q9H8N7 513 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-208ENST00000504047 NOD1Q9Y239 953 aa6.24□□□□□ -1.41
ATXN3-208ENST00000504047 SPINT1O43278 529 aa6.23□□□□□ -1.41
ATXN3-208ENST00000504047 GNRH1P01148 92 aa6.23□□□□□ -1.41
ATXN3-208ENST00000504047 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
ATXN3-208ENST00000504047 NLRP3Q96P20 1036 aa6.23□□□□□ -1.41
ATXN3-208ENST00000504047 UCN2Q96RP3 112 aa6.23□□□□□ -1.41
ATXN3-208ENST00000504047 OSBPL3Q9H4L5 887 aa6.23□□□□□ -1.41
ATXN3-208ENST00000504047 POLMQ9NP87 494 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-208ENST00000504047 TTLL8A6PVC2 850 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 MAN1A2O60476 641 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 NCOA4Q13772 614 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 ESCO1Q5FWF5 840 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 TRIM50Q86XT4 487 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 PLEKHM2Q8IWE5 1019 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
ATXN3-208ENST00000504047 TFIP11Q9UBB9 837 aaKnown RBP6.22□□□□□ -1.41
ATXN3-208ENST00000504047 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 MEN1O00255 615 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 ATP1A2P50993 1020 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 DEPDC4Q8N2C3 294 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 INSM2Q96T92 566 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-208ENST00000504047 ARHGEF10LQ9HCE6 1279 aa6.21□□□□□ -1.42
ATXN3-208ENST00000504047 SOS2Q07890 1332 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-208ENST00000504047 A0A1W2PRU2 124 aa6.2□□□□□ -1.42
ATXN3-208ENST00000504047 PALM3A6NDB9 673 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-208ENST00000504047 POTECB2RU33 542 aa6.2□□□□□ -1.42
ATXN3-208ENST00000504047 SNRPBP14678 240 aaKnown RBP6.2□□□□□ -1.42
ATXN3-208ENST00000504047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.2□□□□□ -1.42
ATXN3-208ENST00000504047 KDF1Q8NAX2 398 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-208ENST00000504047 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-208ENST00000504047 GTF2E1P29083 439 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-208ENST00000504047 GPC1P35052 558 aa6.19□□□□□ -1.42
ATXN3-208ENST00000504047 CTSOP43234 321 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-208ENST00000504047 GTF2IP78347 998 aa6.19□□□□□ -1.42
ATXN3-208ENST00000504047 PSME1Q06323 249 aa6.19□□□□□ -1.42
ATXN3-208ENST00000504047 CLN3Q13286 438 aa6.19□□□□□ -1.42
ATXN3-208ENST00000504047 RAB6BQ9NRW1 208 aa6.19□□□□□ -1.42
ATXN3-208ENST00000504047 SERPINA10Q9UK55 444 aa6.19□□□□□ -1.42
ATXN3-208ENST00000504047 MAFBQ9Y5Q3 323 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-208ENST00000504047 FIGNL2A6NMB9 653 aa6.18□□□□□ -1.42
ATXN3-208ENST00000504047 LMOD1P29536 600 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-208ENST00000504047 RNF144AP50876 292 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-208ENST00000504047 SLC27A3Q5K4L6 730 aa6.18□□□□□ -1.42
ATXN3-208ENST00000504047 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
ATXN3-208ENST00000504047 ESYT1Q9BSJ8 1104 aa6.18□□□□□ -1.42
ATXN3-208ENST00000504047 MKRN1Q9UHC7 482 aaKnown RBP6.18□□□□□ -1.42
ATXN3-208ENST00000504047 RBM19Q9Y4C8 960 aaKnown RBP6.18□□□□□ -1.42
ATXN3-208ENST00000504047 GDF10P55107 478 aa6.17□□□□□ -1.42
ATXN3-208ENST00000504047 LYSMD3Q7Z3D4 306 aa6.17□□□□□ -1.42
ATXN3-208ENST00000504047 RNF217Q8TC41 542 aa6.17□□□□□ -1.42
ATXN3-208ENST00000504047 DNMT3LQ9UJW3 386 aa6.17□□□□□ -1.42
ATXN3-208ENST00000504047 PCDHGA11Q9Y5H2 935 aa6.17□□□□□ -1.42
ATXN3-208ENST00000504047 ARID3CA6NKF2 412 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 WASLO00401 505 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-208ENST00000504047 BACH1O14867 736 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 INHAP05111 366 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 FOXD4L5Q5VV16 416 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-208ENST00000504047 LARP1Q6PKG0 1096 aaKnown RBP6.16□□□□□ -1.42
ATXN3-208ENST00000504047 LARGE2Q8N3Y3 721 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 OGFOD1Q8N543 542 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 XAGE2Q96GT9 111 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 VRTNQ9H8Y1 702 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 ETNK1Q9HBU6 452 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 DNAAF2Q9NVR5 837 aaKnown RBP6.16□□□□□ -1.42
ATXN3-208ENST00000504047 TIMELESSQ9UNS1 1208 aa6.16□□□□□ -1.42
ATXN3-208ENST00000504047 SOBPA7XYQ1 873 aa6.15□□□□□ -1.42
ATXN3-208ENST00000504047 IL2RAP01589 272 aa6.15□□□□□ -1.42
ATXN3-208ENST00000504047 RASA1P20936 1047 aa6.15□□□□□ -1.42
ATXN3-208ENST00000504047 CENPCQ03188 943 aa6.15□□□□□ -1.42
ATXN3-208ENST00000504047 CFAP70Q5T0N1 1121 aa6.15□□□□□ -1.42
ATXN3-208ENST00000504047 ZSCAN10Q96SZ4 725 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-208ENST00000504047 RFX1P22670 979 aa6.14□□□□□ -1.43
ATXN3-208ENST00000504047 SCNN1DP51172 638 aa6.14□□□□□ -1.43
ATXN3-208ENST00000504047 TLR1Q15399 786 aa6.14□□□□□ -1.43
ATXN3-208ENST00000504047 GNASQ5JWF2 1037 aa6.14□□□□□ -1.43
ATXN3-208ENST00000504047 CCDC102BQ68D86 513 aa6.14□□□□□ -1.43
ATXN3-208ENST00000504047 TMEM214Q6NUQ4 689 aaKnown RBP6.14□□□□□ -1.43
ATXN3-208ENST00000504047 PRICKLE2Q7Z3G6 844 aa6.14□□□□□ -1.43
ATXN3-208ENST00000504047 CLDN10P78369 228 aa6.13□□□□□ -1.43
ATXN3-208ENST00000504047 NPAS3Q8IXF0 933 aa6.13□□□□□ -1.43
ATXN3-208ENST00000504047 TPCN2Q8NHX9 752 aa6.13□□□□□ -1.43
ATXN3-208ENST00000504047 GRIP2Q9C0E4 1043 aa6.13□□□□□ -1.43
ATXN3-208ENST00000504047 NXF1Q9UBU9 619 aaKnown RBP6.13□□□□□ -1.43
ATXN3-208ENST00000504047 SERTAD1Q9UHV2 236 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms