RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
PRDM2-213ENST00000503842 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
PRDM2-213ENST00000503842 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
PRDM2-213ENST00000503842 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
PRDM2-213ENST00000503842 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
PRDM2-213ENST00000503842 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
PRDM2-213ENST00000503842 SLIT2O94813 1529 aa17.67■□□□□ 0.42
PRDM2-213ENST00000503842 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
PRDM2-213ENST00000503842 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
PRDM2-213ENST00000503842 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
PRDM2-213ENST00000503842 CREBZFQ9NS37 354 aa17.66■□□□□ 0.42
PRDM2-213ENST00000503842 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
PRDM2-213ENST00000503842 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
PRDM2-213ENST00000503842 NRAPQ86VF7 1730 aa17.65■□□□□ 0.42
PRDM2-213ENST00000503842 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
PRDM2-213ENST00000503842 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
PRDM2-213ENST00000503842 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRDM2-213ENST00000503842 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.41
PRDM2-213ENST00000503842 NLRP2Q9NX02 1062 aa17.64■□□□□ 0.41
PRDM2-213ENST00000503842 APAF1O14727 1248 aa17.62■□□□□ 0.41
PRDM2-213ENST00000503842 EVA1CP58658 441 aa17.62■□□□□ 0.41
PRDM2-213ENST00000503842 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
PRDM2-213ENST00000503842 CARD10Q9BWT7 1032 aa17.62■□□□□ 0.41
PRDM2-213ENST00000503842 STRN4Q9NRL3 753 aa17.62■□□□□ 0.41
PRDM2-213ENST00000503842 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
PRDM2-213ENST00000503842 TCP11L2Q8N4U5 519 aa17.61■□□□□ 0.41
PRDM2-213ENST00000503842 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
PRDM2-213ENST00000503842 C8orf37Q96NL8 207 aa17.61■□□□□ 0.41
PRDM2-213ENST00000503842 MAPK8IP3Q9UPT6 1336 aa17.61■□□□□ 0.41
PRDM2-213ENST00000503842 CRB1P82279 1406 aa17.61■□□□□ 0.41
PRDM2-213ENST00000503842 TOM1L2Q6ZVM7 507 aa17.6■□□□□ 0.41
PRDM2-213ENST00000503842 BCL9LQ86UU0 1499 aa17.59■□□□□ 0.41
PRDM2-213ENST00000503842 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
PRDM2-213ENST00000503842 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
PRDM2-213ENST00000503842 IFNLR1Q8IU57 520 aaPredicted RBP17.59■□□□□ 0.41
PRDM2-213ENST00000503842 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
PRDM2-213ENST00000503842 NGLY1Q96IV0 654 aa17.59■□□□□ 0.41
PRDM2-213ENST00000503842 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
PRDM2-213ENST00000503842 NEFMP07197 916 aa17.58■□□□□ 0.4
PRDM2-213ENST00000503842 TMPOP42166 694 aaKnown RBP17.58■□□□□ 0.4
PRDM2-213ENST00000503842 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.4
PRDM2-213ENST00000503842 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
PRDM2-213ENST00000503842 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
PRDM2-213ENST00000503842 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.57■□□□□ 0.4
PRDM2-213ENST00000503842 MEGF6O75095 1541 aa17.57■□□□□ 0.4
PRDM2-213ENST00000503842 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
PRDM2-213ENST00000503842 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
PRDM2-213ENST00000503842 SPATA31A5Q5VU36 1347 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 SPATA31A7Q8IWB4 1347 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 ZNF521Q96K83 1311 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
PRDM2-213ENST00000503842 VPS72Q15906 364 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 CCDC27Q2M243 656 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 MTHFSDQ2M296 383 aaKnown RBP17.54■□□□□ 0.4
PRDM2-213ENST00000503842 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
PRDM2-213ENST00000503842 AFF2P51816 1311 aa17.53■□□□□ 0.4
PRDM2-213ENST00000503842 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
PRDM2-213ENST00000503842 RIPK4P57078 832 aa17.53■□□□□ 0.4
PRDM2-213ENST00000503842 USP21Q9UK80 565 aa17.53■□□□□ 0.4
PRDM2-213ENST00000503842 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
PRDM2-213ENST00000503842 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.4
PRDM2-213ENST00000503842 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
PRDM2-213ENST00000503842 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
PRDM2-213ENST00000503842 PLEKHO1Q53GL0 409 aaPredicted RBP17.52■□□□□ 0.4
PRDM2-213ENST00000503842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRDM2-213ENST00000503842 TRIM35Q9UPQ4 493 aa17.52■□□□□ 0.4
PRDM2-213ENST00000503842 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
PRDM2-213ENST00000503842 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.39
PRDM2-213ENST00000503842 IL2RBP14784 551 aa17.51■□□□□ 0.39
PRDM2-213ENST00000503842 WWC1Q8IX03 1113 aa17.51■□□□□ 0.39
PRDM2-213ENST00000503842 THRAP3Q9Y2W1 955 aaKnown RBP17.51■□□□□ 0.39
PRDM2-213ENST00000503842 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
PRDM2-213ENST00000503842 ATRNO75882 1429 aa17.5■□□□□ 0.39
PRDM2-213ENST00000503842 USP35Q9P2H5 1018 aa17.5■□□□□ 0.39
PRDM2-213ENST00000503842 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
PRDM2-213ENST00000503842 LMOD3Q0VAK6 560 aa17.49■□□□□ 0.39
PRDM2-213ENST00000503842 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
PRDM2-213ENST00000503842 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
PRDM2-213ENST00000503842 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
PRDM2-213ENST00000503842 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
PRDM2-213ENST00000503842 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
PRDM2-213ENST00000503842 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
PRDM2-213ENST00000503842 SPOCK2Q92563 424 aa17.47■□□□□ 0.39
PRDM2-213ENST00000503842 CDCA7Q9BWT1 371 aaPredicted RBP17.47■□□□□ 0.39
PRDM2-213ENST00000503842 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
PRDM2-213ENST00000503842 AKAP4Q5JQC9 854 aa17.46■□□□□ 0.39
PRDM2-213ENST00000503842 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
PRDM2-213ENST00000503842 ZCRB1Q8TBF4 217 aaKnown RBP17.46■□□□□ 0.39
PRDM2-213ENST00000503842 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
PRDM2-213ENST00000503842 SHANK3Q9BYB0 1731 aa17.46■□□□□ 0.39
PRDM2-213ENST00000503842 GLI3P10071 1580 aa17.45■□□□□ 0.38
PRDM2-213ENST00000503842 GNAT3A8MTJ3 354 aa17.45■□□□□ 0.38
PRDM2-213ENST00000503842 CYP27B1O15528 508 aa17.44■□□□□ 0.38
PRDM2-213ENST00000503842 PHKG2P15735 406 aa17.44■□□□□ 0.38
PRDM2-213ENST00000503842 GOLGA2Q08379 1002 aa17.44■□□□□ 0.38
PRDM2-213ENST00000503842 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
PRDM2-213ENST00000503842 IL16Q14005 1332 aa17.44■□□□□ 0.38
PRDM2-213ENST00000503842 ADAMTS7Q9UKP4 1686 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms