RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
SDHA-203ENST00000503674 PRPF40AO75400 957 aaKnown RBP17.13■□□□□ 0.33
SDHA-203ENST00000503674 MTHFSP49914 203 aa17.13■□□□□ 0.33
SDHA-203ENST00000503674 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
SDHA-203ENST00000503674 PLEKHG1Q9ULL1 1385 aa17.13■□□□□ 0.33
SDHA-203ENST00000503674 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
SDHA-203ENST00000503674 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
SDHA-203ENST00000503674 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
SDHA-203ENST00000503674 ADAMTS13Q76LX8 1427 aa17.12■□□□□ 0.33
SDHA-203ENST00000503674 SLIT1O75093 1534 aa17.12■□□□□ 0.33
SDHA-203ENST00000503674 SYCE3A1L190 88 aa17.11■□□□□ 0.33
SDHA-203ENST00000503674 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
SDHA-203ENST00000503674 RABEP1Q15276 862 aa17.11■□□□□ 0.33
SDHA-203ENST00000503674 MON2Q7Z3U7 1717 aa17.11■□□□□ 0.33
SDHA-203ENST00000503674 ARHGAP23Q9P227 1491 aa17.11■□□□□ 0.33
SDHA-203ENST00000503674 KIAA2012Q0VF49 1180 aa17.1■□□□□ 0.33
SDHA-203ENST00000503674 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
SDHA-203ENST00000503674 FYB1O15117 783 aa17.1■□□□□ 0.33
SDHA-203ENST00000503674 AKAP12Q02952 1782 aa17.1■□□□□ 0.33
SDHA-203ENST00000503674 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
SDHA-203ENST00000503674 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
SDHA-203ENST00000503674 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
SDHA-203ENST00000503674 NSFL1CQ9UNZ2 370 aaKnown RBP17.09■□□□□ 0.33
SDHA-203ENST00000503674 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
SDHA-203ENST00000503674 PPIP5K1Q6PFW1 1433 aa17.09■□□□□ 0.33
SDHA-203ENST00000503674 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
SDHA-203ENST00000503674 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
SDHA-203ENST00000503674 TSC1Q92574 1164 aa17.09■□□□□ 0.33
SDHA-203ENST00000503674 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
SDHA-203ENST00000503674 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
SDHA-203ENST00000503674 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.33
SDHA-203ENST00000503674 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.33
SDHA-203ENST00000503674 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.33
SDHA-203ENST00000503674 CDC45O75419 566 aa17.08■□□□□ 0.32
SDHA-203ENST00000503674 KIF20AO95235 890 aa17.08■□□□□ 0.32
SDHA-203ENST00000503674 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
SDHA-203ENST00000503674 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
SDHA-203ENST00000503674 CWC22Q9HCG8 908 aaKnown RBP17.08■□□□□ 0.32
SDHA-203ENST00000503674 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.32
SDHA-203ENST00000503674 CBX1P83916 185 aa17.07■□□□□ 0.32
SDHA-203ENST00000503674 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
SDHA-203ENST00000503674 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
SDHA-203ENST00000503674 TXNDC2Q86VQ3 553 aa17.07■□□□□ 0.32
SDHA-203ENST00000503674 TRIM35Q9UPQ4 493 aa17.07■□□□□ 0.32
SDHA-203ENST00000503674 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
SDHA-203ENST00000503674 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
SDHA-203ENST00000503674 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
SDHA-203ENST00000503674 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
SDHA-203ENST00000503674 HMGN5P82970 282 aaKnown RBP17.06■□□□□ 0.32
SDHA-203ENST00000503674 ATP2B3Q16720 1220 aa17.06■□□□□ 0.32
SDHA-203ENST00000503674 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
SDHA-203ENST00000503674 TOPAZ1Q8N9V7 1692 aa17.05■□□□□ 0.32
SDHA-203ENST00000503674 LTKP29376 864 aa17.05■□□□□ 0.32
SDHA-203ENST00000503674 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
SDHA-203ENST00000503674 DNTTIP2Q5QJE6 756 aaKnown RBP17.05■□□□□ 0.32
SDHA-203ENST00000503674 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
SDHA-203ENST00000503674 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
SDHA-203ENST00000503674 PTMAP06454 111 aaKnown RBP17.04■□□□□ 0.32
SDHA-203ENST00000503674 GSPT1P15170 499 aaKnown RBP17.04■□□□□ 0.32
SDHA-203ENST00000503674 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
SDHA-203ENST00000503674 LETM1O95202 739 aaPredicted RBP17.04■□□□□ 0.32
SDHA-203ENST00000503674 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
SDHA-203ENST00000503674 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
SDHA-203ENST00000503674 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
SDHA-203ENST00000503674 ROBO2Q9HCK4 1378 aa17.03■□□□□ 0.32
SDHA-203ENST00000503674 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
SDHA-203ENST00000503674 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
SDHA-203ENST00000503674 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.32
SDHA-203ENST00000503674 IL16Q14005 1332 aa17.02■□□□□ 0.32
SDHA-203ENST00000503674 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
SDHA-203ENST00000503674 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.32
SDHA-203ENST00000503674 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.312e-8■■■■■ 26.9
SDHA-203ENST00000503674 MBD3O95983 291 aa17.01■□□□□ 0.31
SDHA-203ENST00000503674 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
SDHA-203ENST00000503674 NUDT16Q96DE0 195 aaKnown RBP17.01■□□□□ 0.31
SDHA-203ENST00000503674 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
SDHA-203ENST00000503674 KIF3AQ9Y496 699 aa17■□□□□ 0.31
SDHA-203ENST00000503674 TSPY26PQ9H489 355 aa17■□□□□ 0.31
SDHA-203ENST00000503674 NRKQ7Z2Y5 1582 aa17■□□□□ 0.31
SDHA-203ENST00000503674 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
SDHA-203ENST00000503674 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
SDHA-203ENST00000503674 BBXQ8WY36 941 aaPredicted RBP16.99■□□□□ 0.31
SDHA-203ENST00000503674 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
SDHA-203ENST00000503674 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
SDHA-203ENST00000503674 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
SDHA-203ENST00000503674 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
SDHA-203ENST00000503674 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
SDHA-203ENST00000503674 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
SDHA-203ENST00000503674 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
SDHA-203ENST00000503674 ST18O60284 1047 aa16.98■□□□□ 0.31
SDHA-203ENST00000503674 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
SDHA-203ENST00000503674 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
SDHA-203ENST00000503674 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
SDHA-203ENST00000503674 SETD1BQ9UPS6 1966 aaKnown RBP16.97■□□□□ 0.31
SDHA-203ENST00000503674 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
SDHA-203ENST00000503674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.97■□□□□ 0.31
SDHA-203ENST00000503674 SPTLC3Q9NUV7 552 aa16.97■□□□□ 0.31
SDHA-203ENST00000503674 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
SDHA-203ENST00000503674 MPNDQ8N594 471 aa16.97■□□□□ 0.31
SDHA-203ENST00000503674 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms