RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 SLIT2O94813 1529 aa15.4■□□□□ 0.06
SCG5-209ENST00000498607 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
SCG5-209ENST00000498607 NLRP2Q9NX02 1062 aa15.4■□□□□ 0.06
SCG5-209ENST00000498607 BTG4Q9NY30 223 aa15.4■□□□□ 0.06
SCG5-209ENST00000498607 USHBP1Q8N6Y0 703 aa15.39■□□□□ 0.05
SCG5-209ENST00000498607 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
SCG5-209ENST00000498607 CRB1P82279 1406 aa15.38■□□□□ 0.05
SCG5-209ENST00000498607 DLG5Q8TDM6 1919 aa15.38■□□□□ 0.05
SCG5-209ENST00000498607 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.37■□□□□ 0.05
SCG5-209ENST00000498607 EVA1CP58658 441 aa15.37■□□□□ 0.05
SCG5-209ENST00000498607 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
SCG5-209ENST00000498607 CARD10Q9BWT7 1032 aa15.37■□□□□ 0.05
SCG5-209ENST00000498607 STRN4Q9NRL3 753 aa15.37■□□□□ 0.05
SCG5-209ENST00000498607 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
SCG5-209ENST00000498607 TMPOP42166 694 aaKnown RBP15.36■□□□□ 0.05
SCG5-209ENST00000498607 NFE2L2Q16236 605 aa15.36■□□□□ 0.05
SCG5-209ENST00000498607 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
SCG5-209ENST00000498607 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
SCG5-209ENST00000498607 WNK3Q9BYP7 1800 aa15.35■□□□□ 0.05
SCG5-209ENST00000498607 PKD1L3Q7Z443 1732 aa15.34■□□□□ 0.05
SCG5-209ENST00000498607 MEGF6O75095 1541 aa15.34■□□□□ 0.05
SCG5-209ENST00000498607 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
SCG5-209ENST00000498607 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
SCG5-209ENST00000498607 NGLY1Q96IV0 654 aa15.34■□□□□ 0.05
SCG5-209ENST00000498607 C8orf37Q96NL8 207 aa15.34■□□□□ 0.05
SCG5-209ENST00000498607 RRP7AQ9Y3A4 280 aaKnown RBP15.34■□□□□ 0.05
SCG5-209ENST00000498607 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.04
SCG5-209ENST00000498607 FNBP4Q8N3X1 1017 aaPredicted RBP15.33■□□□□ 0.04
SCG5-209ENST00000498607 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
SCG5-209ENST00000498607 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
SCG5-209ENST00000498607 ZNF521Q96K83 1311 aa15.33■□□□□ 0.04
SCG5-209ENST00000498607 NEUROD2Q15784 382 aa15.32■□□□□ 0.04
SCG5-209ENST00000498607 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
SCG5-209ENST00000498607 OVOS2A0A0G2JMS6 1433 aa15.32■□□□□ 0.04
SCG5-209ENST00000498607 BCL9LQ86UU0 1499 aa15.32■□□□□ 0.04
SCG5-209ENST00000498607 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
SCG5-209ENST00000498607 RIPK4P57078 832 aa15.31■□□□□ 0.04
SCG5-209ENST00000498607 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
SCG5-209ENST00000498607 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
SCG5-209ENST00000498607 AMOTQ4VCS5 1084 aa15.31■□□□□ 0.04
SCG5-209ENST00000498607 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
SCG5-209ENST00000498607 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
SCG5-209ENST00000498607 DISP2A7MBM2 1401 aa15.3■□□□□ 0.04
SCG5-209ENST00000498607 PDE3BQ13370 1112 aa15.3■□□□□ 0.04
SCG5-209ENST00000498607 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
SCG5-209ENST00000498607 WWC1Q8IX03 1113 aa15.3■□□□□ 0.04
SCG5-209ENST00000498607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCG5-209ENST00000498607 MAP3K5Q99683 1374 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
SCG5-209ENST00000498607 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 IL2RBP14784 551 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
SCG5-209ENST00000498607 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
SCG5-209ENST00000498607 AFF2P51816 1311 aa15.28■□□□□ 0.04
SCG5-209ENST00000498607 VPS72Q15906 364 aa15.28■□□□□ 0.04
SCG5-209ENST00000498607 ZNF530Q6P9A1 599 aaPredicted RBP15.28■□□□□ 0.04
SCG5-209ENST00000498607 USP21Q9UK80 565 aa15.28■□□□□ 0.04
SCG5-209ENST00000498607 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
SCG5-209ENST00000498607 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
SCG5-209ENST00000498607 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.04
SCG5-209ENST00000498607 HTATSF1O43719 755 aaKnown RBP15.27■□□□□ 0.04
SCG5-209ENST00000498607 WDR63Q8IWG1 891 aa15.27■□□□□ 0.04
SCG5-209ENST00000498607 SPG7Q9UQ90 795 aa15.27■□□□□ 0.04
SCG5-209ENST00000498607 ADAMTS7Q9UKP4 1686 aa15.26■□□□□ 0.03
SCG5-209ENST00000498607 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
SCG5-209ENST00000498607 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
SCG5-209ENST00000498607 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
SCG5-209ENST00000498607 ATRNO75882 1429 aa15.26■□□□□ 0.03
SCG5-209ENST00000498607 IL16Q14005 1332 aa15.25■□□□□ 0.03
SCG5-209ENST00000498607 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
SCG5-209ENST00000498607 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
SCG5-209ENST00000498607 AKAP4Q5JQC9 854 aa15.25■□□□□ 0.03
SCG5-209ENST00000498607 CDCA7Q9BWT1 371 aaPredicted RBP15.25■□□□□ 0.03
SCG5-209ENST00000498607 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
SCG5-209ENST00000498607 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
SCG5-209ENST00000498607 BARGINQ6ZT62 677 aa15.24■□□□□ 0.03
SCG5-209ENST00000498607 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
SCG5-209ENST00000498607 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
SCG5-209ENST00000498607 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
SCG5-209ENST00000498607 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
SCG5-209ENST00000498607 GLI3P10071 1580 aa15.24■□□□□ 0.03
SCG5-209ENST00000498607 PCDH11XQ9BZA7 1347 aa15.23■□□□□ 0.03
SCG5-209ENST00000498607 PCDH11YQ9BZA8 1340 aa15.23■□□□□ 0.03
SCG5-209ENST00000498607 E9PSI1 815 aa15.23■□□□□ 0.03
SCG5-209ENST00000498607 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
SCG5-209ENST00000498607 SLFN5Q08AF3 891 aa15.22■□□□□ 0.03
SCG5-209ENST00000498607 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
SCG5-209ENST00000498607 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
SCG5-209ENST00000498607 CEMIPQ8WUJ3 1361 aa15.22■□□□□ 0.03
SCG5-209ENST00000498607 CYP27B1O15528 508 aa15.21■□□□□ 0.03
SCG5-209ENST00000498607 PHKG2P15735 406 aa15.21■□□□□ 0.03
SCG5-209ENST00000498607 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
SCG5-209ENST00000498607 MCM10Q7L590 875 aa15.21■□□□□ 0.03
SCG5-209ENST00000498607 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
SCG5-209ENST00000498607 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms