RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 SLFN5Q08AF3 891 aa20.95■□□□□ 0.94
PTK7-220ENST00000497957 MEX3CQ5U5Q3 659 aaKnown RBP20.95■□□□□ 0.94
PTK7-220ENST00000497957 ZNF530Q6P9A1 599 aaPredicted RBP20.95■□□□□ 0.94
PTK7-220ENST00000497957 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
PTK7-220ENST00000497957 FBXO41Q8TF61 875 aa20.95■□□□□ 0.94
PTK7-220ENST00000497957 OVOS2A0A0G2JMS6 1433 aa20.95■□□□□ 0.94
PTK7-220ENST00000497957 PLEKHO1Q53GL0 409 aaPredicted RBP20.94■□□□□ 0.94
PTK7-220ENST00000497957 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
PTK7-220ENST00000497957 SHANK3Q9BYB0 1731 aa20.93■□□□□ 0.94
PTK7-220ENST00000497957 NCBP3Q53F19 620 aaKnown RBP20.93■□□□□ 0.94
PTK7-220ENST00000497957 UNC5CLQ8IV45 518 aa20.93■□□□□ 0.94
PTK7-220ENST00000497957 FNBP4Q8N3X1 1017 aaPredicted RBP20.93■□□□□ 0.94
PTK7-220ENST00000497957 NGEFQ8N5V2 710 aa20.93■□□□□ 0.94
PTK7-220ENST00000497957 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
PTK7-220ENST00000497957 DISP2A7MBM2 1401 aa20.93■□□□□ 0.94
PTK7-220ENST00000497957 PARP4Q9UKK3 1724 aaKnown RBP20.92■□□□□ 0.94
PTK7-220ENST00000497957 WNK3Q9BYP7 1800 aa20.92■□□□□ 0.94
PTK7-220ENST00000497957 DUSP27Q5VZP5 1158 aa20.92■□□□□ 0.94
PTK7-220ENST00000497957 WDR63Q8IWG1 891 aa20.92■□□□□ 0.94
PTK7-220ENST00000497957 TRMT2AQ8IZ69 625 aaKnown RBP20.92■□□□□ 0.94
PTK7-220ENST00000497957 LGR6Q9HBX8 967 aa20.92■□□□□ 0.94
PTK7-220ENST00000497957 SPATA31A1Q5TZJ5 1347 aa20.92■□□□□ 0.94
PTK7-220ENST00000497957 IL2RBP14784 551 aa20.91■□□□□ 0.94
PTK7-220ENST00000497957 AFF2P51816 1311 aa20.91■□□□□ 0.94
PTK7-220ENST00000497957 PDE3BQ13370 1112 aa20.91■□□□□ 0.94
PTK7-220ENST00000497957 SPATA31A5Q5VU36 1347 aa20.91■□□□□ 0.94
PTK7-220ENST00000497957 SPATA31A7Q8IWB4 1347 aa20.91■□□□□ 0.94
PTK7-220ENST00000497957 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
PTK7-220ENST00000497957 TSR2Q969E8 191 aaKnown RBP20.91■□□□□ 0.94
PTK7-220ENST00000497957 CYP27B1O15528 508 aa20.9■□□□□ 0.94
PTK7-220ENST00000497957 USP21Q9UK80 565 aa20.9■□□□□ 0.94
PTK7-220ENST00000497957 CCDC9Q9Y3X0 531 aaKnown RBP20.9■□□□□ 0.94
PTK7-220ENST00000497957 LRRC37A3O60309 1634 aa20.89■□□□□ 0.94
PTK7-220ENST00000497957 GNAT3A8MTJ3 354 aa20.89■□□□□ 0.93
PTK7-220ENST00000497957 AMOTQ4VCS5 1084 aa20.89■□□□□ 0.93
PTK7-220ENST00000497957 MPRIPQ6WCQ1 1025 aa20.89■□□□□ 0.93
PTK7-220ENST00000497957 LAS1LQ9Y4W2 734 aaKnown RBP20.89■□□□□ 0.93
PTK7-220ENST00000497957 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.87■□□□□ 0.93
PTK7-220ENST00000497957 E9PSI1 815 aa20.87■□□□□ 0.93
PTK7-220ENST00000497957 PHKG2P15735 406 aa20.87■□□□□ 0.93
PTK7-220ENST00000497957 LMOD3Q0VAK6 560 aa20.87■□□□□ 0.93
PTK7-220ENST00000497957 VPS72Q15906 364 aa20.87■□□□□ 0.93
PTK7-220ENST00000497957 AKAP4Q5JQC9 854 aa20.87■□□□□ 0.93
PTK7-220ENST00000497957 SPG7Q9UQ90 795 aa20.87■□□□□ 0.93
PTK7-220ENST00000497957 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
PTK7-220ENST00000497957 VIRMAQ69YN4 1812 aaKnown RBP20.86■□□□□ 0.93
PTK7-220ENST00000497957 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
PTK7-220ENST00000497957 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
PTK7-220ENST00000497957 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
PTK7-220ENST00000497957 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
PTK7-220ENST00000497957 ZNF853P0CG23 659 aa20.85■□□□□ 0.93
PTK7-220ENST00000497957 RTF1Q92541 710 aaKnown RBP20.85■□□□□ 0.93
PTK7-220ENST00000497957 GLI3P10071 1580 aa20.85■□□□□ 0.93
PTK7-220ENST00000497957 IL16Q14005 1332 aa20.84■□□□□ 0.93
PTK7-220ENST00000497957 ADAMTS7Q9UKP4 1686 aa20.84■□□□□ 0.93
PTK7-220ENST00000497957 C1orf141Q5JVX7 400 aa20.84■□□□□ 0.93
PTK7-220ENST00000497957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.84■□□□□ 0.931e-8■□□□□ 8.5
PTK7-220ENST00000497957 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.93
PTK7-220ENST00000497957 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
PTK7-220ENST00000497957 MBIPQ9NS73 344 aa20.83■□□□□ 0.93
PTK7-220ENST00000497957 CEMIPQ8WUJ3 1361 aa20.83■□□□□ 0.92
PTK7-220ENST00000497957 ATRNO75882 1429 aa20.82■□□□□ 0.92
PTK7-220ENST00000497957 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
PTK7-220ENST00000497957 IFNL2Q8IZJ0 200 aa20.81■□□□□ 0.92
PTK7-220ENST00000497957 IFT57Q9NWB7 429 aa20.81■□□□□ 0.92
PTK7-220ENST00000497957 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
PTK7-220ENST00000497957 EXOSC9Q06265 439 aaKnown RBP20.8■□□□□ 0.92
PTK7-220ENST00000497957 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
PTK7-220ENST00000497957 PCDH11XQ9BZA7 1347 aa20.79■□□□□ 0.92
PTK7-220ENST00000497957 PCDH11YQ9BZA8 1340 aa20.79■□□□□ 0.92
PTK7-220ENST00000497957 TOGARAM1Q9Y4F4 1720 aa20.79■□□□□ 0.92
PTK7-220ENST00000497957 BARGINQ6ZT62 677 aa20.79■□□□□ 0.92
PTK7-220ENST00000497957 MYH16Q9H6N6 1097 aa20.79■□□□□ 0.92
PTK7-220ENST00000497957 THRAP3Q9Y2W1 955 aaKnown RBP20.79■□□□□ 0.92
PTK7-220ENST00000497957 PLEKHG2Q9H7P9 1386 aa20.79■□□□□ 0.92
PTK7-220ENST00000497957 TNS2Q63HR2 1409 aa20.78■□□□□ 0.92
PTK7-220ENST00000497957 CHL1O00533 1208 aa20.78■□□□□ 0.92
PTK7-220ENST00000497957 KCNQ3O43525 872 aa20.78■□□□□ 0.92
PTK7-220ENST00000497957 GNAI1P63096 354 aa20.78■□□□□ 0.92
PTK7-220ENST00000497957 CFAP44Q96MT7 982 aa20.78■□□□□ 0.92
PTK7-220ENST00000497957 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.92
PTK7-220ENST00000497957 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
PTK7-220ENST00000497957 TSPYL6Q8N831 410 aa20.76■□□□□ 0.91
PTK7-220ENST00000497957 GJD4Q96KN9 370 aaPredicted RBP20.76■□□□□ 0.91
PTK7-220ENST00000497957 QTRT2Q9H974 415 aaKnown RBP20.76■□□□□ 0.91
PTK7-220ENST00000497957 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
PTK7-220ENST00000497957 THSD7AQ9UPZ6 1657 aa20.76■□□□□ 0.91
PTK7-220ENST00000497957 EXOC5O00471 708 aa20.75■□□□□ 0.91
PTK7-220ENST00000497957 C8orf58Q8NAV2 365 aa20.75■□□□□ 0.91
PTK7-220ENST00000497957 NKX1-1Q15270 411 aaPredicted RBP20.74■□□□□ 0.91
PTK7-220ENST00000497957 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
PTK7-220ENST00000497957 MARCH10Q8NA82 808 aaPredicted RBP20.74■□□□□ 0.91
PTK7-220ENST00000497957 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
PTK7-220ENST00000497957 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
PTK7-220ENST00000497957 TRPC5Q9UL62 973 aaPredicted RBP20.74■□□□□ 0.91
PTK7-220ENST00000497957 MRC1P22897 1456 aa20.74■□□□□ 0.91
PTK7-220ENST00000497957 KDM3BQ7LBC6 1761 aa20.73■□□□□ 0.91
PTK7-220ENST00000497957 ELL2O00472 640 aaPredicted RBP20.73■□□□□ 0.91
PTK7-220ENST00000497957 TEFQ10587 303 aa20.73■□□□□ 0.91
PTK7-220ENST00000497957 DDB1Q16531 1140 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms