RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
ATG3-208ENST00000495756 MAPK8IP3Q9UPT6 1336 aa25.8■■□□□ 1.72
ATG3-208ENST00000495756 OVOS2A0A0G2JMS6 1433 aa25.8■■□□□ 1.72
ATG3-208ENST00000495756 NEFMP07197 916 aa25.79■■□□□ 1.72
ATG3-208ENST00000495756 CDCA7Q9BWT1 371 aaPredicted RBP25.79■■□□□ 1.72
ATG3-208ENST00000495756 FAM98CQ17RN3 349 aaKnown RBP25.79■■□□□ 1.72
ATG3-208ENST00000495756 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
ATG3-208ENST00000495756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.77■■□□□ 1.724e-11■■■■■ 34.8
ATG3-208ENST00000495756 PKD1L3Q7Z443 1732 aa25.76■■□□□ 1.71
ATG3-208ENST00000495756 AMOTQ4VCS5 1084 aa25.76■■□□□ 1.71
ATG3-208ENST00000495756 RBM6P78332 1123 aaKnown RBP25.75■■□□□ 1.71
ATG3-208ENST00000495756 APAF1O14727 1248 aa25.74■■□□□ 1.71
ATG3-208ENST00000495756 MTHFSDQ2M296 383 aaKnown RBP25.74■■□□□ 1.71
ATG3-208ENST00000495756 SPG7Q9UQ90 795 aa25.74■■□□□ 1.71
ATG3-208ENST00000495756 THSD7AQ9UPZ6 1657 aa25.73■■□□□ 1.71
ATG3-208ENST00000495756 ONECUT3O60422 494 aaPredicted RBP25.73■■□□□ 1.71
ATG3-208ENST00000495756 ZCRB1Q8TBF4 217 aaKnown RBP25.73■■□□□ 1.71
ATG3-208ENST00000495756 POTEAQ6S8J7 498 aa25.72■■□□□ 1.71
ATG3-208ENST00000495756 GAS2L2Q8NHY3 880 aa25.72■■□□□ 1.71
ATG3-208ENST00000495756 NFE2L2Q16236 605 aa25.72■■□□□ 1.71
ATG3-208ENST00000495756 LRRC37A3O60309 1634 aa25.71■■□□□ 1.71
ATG3-208ENST00000495756 EXOC5O00471 708 aa25.71■■□□□ 1.71
ATG3-208ENST00000495756 TMPOP42166 694 aaKnown RBP25.71■■□□□ 1.71
ATG3-208ENST00000495756 TNS2Q63HR2 1409 aa25.7■■□□□ 1.7
ATG3-208ENST00000495756 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
ATG3-208ENST00000495756 RXRBP28702 533 aa25.7■■□□□ 1.7
ATG3-208ENST00000495756 DDB1Q16531 1140 aa25.7■■□□□ 1.7
ATG3-208ENST00000495756 ZNF530Q6P9A1 599 aaPredicted RBP25.7■■□□□ 1.7
ATG3-208ENST00000495756 RRP7AQ9Y3A4 280 aaKnown RBP25.7■■□□□ 1.7
ATG3-208ENST00000495756 SHANK3Q9BYB0 1731 aa25.7■■□□□ 1.7
ATG3-208ENST00000495756 A0A0G2JS52 829 aa25.69■■□□□ 1.7
ATG3-208ENST00000495756 MYT1Q01538 1121 aa25.69■■□□□ 1.7
ATG3-208ENST00000495756 PCDH11XQ9BZA7 1347 aa25.68■■□□□ 1.7
ATG3-208ENST00000495756 PCDH11YQ9BZA8 1340 aa25.68■■□□□ 1.7
ATG3-208ENST00000495756 NEUROD2Q15784 382 aa25.67■■□□□ 1.7
ATG3-208ENST00000495756 DLG5Q8TDM6 1919 aa25.67■■□□□ 1.7
ATG3-208ENST00000495756 CYP27B1O15528 508 aa25.66■■□□□ 1.7
ATG3-208ENST00000495756 RIPK4P57078 832 aa25.66■■□□□ 1.7
ATG3-208ENST00000495756 ILDR2Q71H61 639 aa25.66■■□□□ 1.7
ATG3-208ENST00000495756 SEPT12Q8IYM1 358 aa25.66■■□□□ 1.7
ATG3-208ENST00000495756 C1orf141Q5JVX7 400 aa25.66■■□□□ 1.7
ATG3-208ENST00000495756 PHKG2P15735 406 aa25.65■■□□□ 1.7
ATG3-208ENST00000495756 HNRNPUQ00839 825 aaKnown RBP eCLIP25.65■■□□□ 1.7
ATG3-208ENST00000495756 AKAP4Q5JQC9 854 aa25.65■■□□□ 1.7
ATG3-208ENST00000495756 IFNL2Q8IZJ0 200 aa25.65■■□□□ 1.7
ATG3-208ENST00000495756 DDX54Q8TDD1 881 aaKnown RBP25.65■■□□□ 1.7
ATG3-208ENST00000495756 MAP3K5Q99683 1374 aa25.64■■□□□ 1.7
ATG3-208ENST00000495756 GNAT3A8MTJ3 354 aa25.63■■□□□ 1.69
ATG3-208ENST00000495756 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
ATG3-208ENST00000495756 NGEFQ8N5V2 710 aa25.63■■□□□ 1.69
ATG3-208ENST00000495756 SALL2Q9Y467 1007 aaPredicted RBP25.62■■□□□ 1.69
ATG3-208ENST00000495756 PDE3BQ13370 1112 aa25.61■■□□□ 1.69
ATG3-208ENST00000495756 TRIM35Q9UPQ4 493 aa25.61■■□□□ 1.69
ATG3-208ENST00000495756 HTATSF1O43719 755 aaKnown RBP25.6■■□□□ 1.69
ATG3-208ENST00000495756 LMOD3Q0VAK6 560 aa25.6■■□□□ 1.69
ATG3-208ENST00000495756 MARCH10Q8NA82 808 aaPredicted RBP25.6■■□□□ 1.69
ATG3-208ENST00000495756 CCDC27Q2M243 656 aa25.6■■□□□ 1.69
ATG3-208ENST00000495756 HSP90AB1P08238 724 aaKnown RBP25.59■■□□□ 1.69
ATG3-208ENST00000495756 NKX1-1Q15270 411 aaPredicted RBP25.59■■□□□ 1.69
ATG3-208ENST00000495756 RTF1Q92541 710 aaKnown RBP25.59■■□□□ 1.69
ATG3-208ENST00000495756 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
ATG3-208ENST00000495756 RGS12O14924 1447 aa25.58■■□□□ 1.69
ATG3-208ENST00000495756 MPRIPQ6WCQ1 1025 aa25.58■■□□□ 1.69
ATG3-208ENST00000495756 BRWD3Q6RI45 1802 aa25.58■■□□□ 1.68
ATG3-208ENST00000495756 DCAF5Q96JK2 942 aa25.57■■□□□ 1.68
ATG3-208ENST00000495756 ADAMTS7Q9UKP4 1686 aa25.56■■□□□ 1.68
ATG3-208ENST00000495756 KDM6AO15550 1401 aaPredicted RBP25.56■■□□□ 1.68
ATG3-208ENST00000495756 DCTN1Q14203 1278 aa25.56■■□□□ 1.68
ATG3-208ENST00000495756 MCM10Q7L590 875 aa25.56■■□□□ 1.68
ATG3-208ENST00000495756 WWC1Q8IX03 1113 aa25.56■■□□□ 1.68
ATG3-208ENST00000495756 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
ATG3-208ENST00000495756 LGR6Q9HBX8 967 aa25.55■■□□□ 1.68
ATG3-208ENST00000495756 RNMTO43148 476 aaKnown RBP25.54■■□□□ 1.68
ATG3-208ENST00000495756 VIRMAQ69YN4 1812 aaKnown RBP25.54■■□□□ 1.68
ATG3-208ENST00000495756 SCN11AQ9UI33 1791 aa25.54■■□□□ 1.68
ATG3-208ENST00000495756 CEMIPQ8WUJ3 1361 aa25.54■■□□□ 1.68
ATG3-208ENST00000495756 KRT27Q7Z3Y8 459 aa25.53■■□□□ 1.68
ATG3-208ENST00000495756 THUMPD2Q9BTF0 503 aaKnown RBP25.53■■□□□ 1.68
ATG3-208ENST00000495756 ZNF521Q96K83 1311 aa25.53■■□□□ 1.68
ATG3-208ENST00000495756 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
ATG3-208ENST00000495756 SOCS7O14512 581 aa25.51■■□□□ 1.67
ATG3-208ENST00000495756 FAM182BQ5T319 152 aa25.5■■□□□ 1.67
ATG3-208ENST00000495756 TOGARAM1Q9Y4F4 1720 aa25.5■■□□□ 1.67
ATG3-208ENST00000495756 EP400Q96L91 3159 aa25.49■■□□□ 1.67
ATG3-208ENST00000495756 BCL9O00512 1426 aa25.48■■□□□ 1.67
ATG3-208ENST00000495756 ERVV-2B6SEH9 535 aa25.48■■□□□ 1.67
ATG3-208ENST00000495756 WDR63Q8IWG1 891 aa25.48■■□□□ 1.67
ATG3-208ENST00000495756 CALD1Q05682 793 aaKnown RBP25.47■■□□□ 1.67
ATG3-208ENST00000495756 DOT1LQ8TEK3 1739 aa25.47■■□□□ 1.67
ATG3-208ENST00000495756 MRC1P22897 1456 aa25.47■■□□□ 1.67
ATG3-208ENST00000495756 TEFQ10587 303 aa25.47■■□□□ 1.67
ATG3-208ENST00000495756 SLC52A2Q9HAB3 445 aa25.46■■□□□ 1.67
ATG3-208ENST00000495756 CABP4P57796 275 aa25.45■■□□□ 1.66
ATG3-208ENST00000495756 SIPA1L3O60292 1781 aaPredicted RBP25.45■■□□□ 1.66
ATG3-208ENST00000495756 IL16Q14005 1332 aa25.44■■□□□ 1.66
ATG3-208ENST00000495756 KAT6BQ8WYB5 2073 aa25.44■■□□□ 1.66
ATG3-208ENST00000495756 NFATC2IPQ8NCF5 419 aa25.44■■□□□ 1.66
ATG3-208ENST00000495756 GOLGA2Q08379 1002 aa25.43■■□□□ 1.66
ATG3-208ENST00000495756 FAM196AQ6ZSG2 479 aa25.43■■□□□ 1.66
ATG3-208ENST00000495756 ITGB4P16144 1822 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms