RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
SAMM50-206ENST00000494795 CHL1O00533 1208 aa13.24□□□□□ -0.29
SAMM50-206ENST00000494795 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
SAMM50-206ENST00000494795 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
SAMM50-206ENST00000494795 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
SAMM50-206ENST00000494795 CRB1P82279 1406 aa13.23□□□□□ -0.29
SAMM50-206ENST00000494795 ANKARQ7Z5J8 1434 aa13.23□□□□□ -0.29
SAMM50-206ENST00000494795 ZBTB7BO15156 539 aaPredicted RBP13.23□□□□□ -0.29
SAMM50-206ENST00000494795 G2E3Q7L622 706 aa13.23□□□□□ -0.29
SAMM50-206ENST00000494795 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
SAMM50-206ENST00000494795 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
SAMM50-206ENST00000494795 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
SAMM50-206ENST00000494795 DDX19BQ9UMR2 479 aa13.22□□□□□ -0.29
SAMM50-206ENST00000494795 USP19O94966 1318 aa13.22□□□□□ -0.29
SAMM50-206ENST00000494795 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
SAMM50-206ENST00000494795 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
SAMM50-206ENST00000494795 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
SAMM50-206ENST00000494795 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
SAMM50-206ENST00000494795 IL17REQ8NFR9 667 aa13.21□□□□□ -0.29
SAMM50-206ENST00000494795 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
SAMM50-206ENST00000494795 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
SAMM50-206ENST00000494795 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.29
SAMM50-206ENST00000494795 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
SAMM50-206ENST00000494795 ARHGEF10O15013 1369 aa13.2□□□□□ -0.3
SAMM50-206ENST00000494795 KDRP35968 1356 aa13.2□□□□□ -0.3
SAMM50-206ENST00000494795 F6X3S4 739 aa13.2□□□□□ -0.3
SAMM50-206ENST00000494795 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
SAMM50-206ENST00000494795 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
SAMM50-206ENST00000494795 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
SAMM50-206ENST00000494795 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
SAMM50-206ENST00000494795 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
SAMM50-206ENST00000494795 CABLES1Q8TDN4 633 aa13.19□□□□□ -0.3
SAMM50-206ENST00000494795 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
SAMM50-206ENST00000494795 RGPD2P0DJD1 1756 aa13.18□□□□□ -0.3
SAMM50-206ENST00000494795 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
SAMM50-206ENST00000494795 ABCC4O15439 1325 aa13.18□□□□□ -0.3
SAMM50-206ENST00000494795 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
SAMM50-206ENST00000494795 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
SAMM50-206ENST00000494795 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
SAMM50-206ENST00000494795 RGS12O14924 1447 aa13.18□□□□□ -0.3
SAMM50-206ENST00000494795 KCNQ3O43525 872 aa13.17□□□□□ -0.3
SAMM50-206ENST00000494795 GCP02774 474 aa13.17□□□□□ -0.3
SAMM50-206ENST00000494795 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
SAMM50-206ENST00000494795 MSH6P52701 1360 aa13.17□□□□□ -0.3
SAMM50-206ENST00000494795 HDAC1Q13547 482 aaPredicted RBP13.17□□□□□ -0.3
SAMM50-206ENST00000494795 LTN1O94822 1766 aa13.17□□□□□ -0.3
SAMM50-206ENST00000494795 NFAT5O94916 1531 aa13.16□□□□□ -0.3
SAMM50-206ENST00000494795 IP6K1Q92551 441 aa13.16□□□□□ -0.3
SAMM50-206ENST00000494795 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
SAMM50-206ENST00000494795 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
SAMM50-206ENST00000494795 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
SAMM50-206ENST00000494795 MEIS3Q99687 375 aa13.15□□□□□ -0.3
SAMM50-206ENST00000494795 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
SAMM50-206ENST00000494795 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.31
SAMM50-206ENST00000494795 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
SAMM50-206ENST00000494795 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
SAMM50-206ENST00000494795 APBB1O00213 710 aa13.14□□□□□ -0.31
SAMM50-206ENST00000494795 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
SAMM50-206ENST00000494795 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
SAMM50-206ENST00000494795 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-206ENST00000494795 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
SAMM50-206ENST00000494795 ANXA1P04083 346 aa13.13□□□□□ -0.31
SAMM50-206ENST00000494795 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
SAMM50-206ENST00000494795 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
SAMM50-206ENST00000494795 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
SAMM50-206ENST00000494795 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
SAMM50-206ENST00000494795 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 NUCB1Q02818 461 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 AAMPQ13685 434 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
SAMM50-206ENST00000494795 PXDNQ92626 1479 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
SAMM50-206ENST00000494795 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
SAMM50-206ENST00000494795 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
SAMM50-206ENST00000494795 API5Q9BZZ5 524 aaKnown RBP13.1□□□□□ -0.31
SAMM50-206ENST00000494795 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
SAMM50-206ENST00000494795 MFAP1P55081 439 aaKnown RBP13.09□□□□□ -0.31
SAMM50-206ENST00000494795 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
SAMM50-206ENST00000494795 RGPD5Q99666 1765 aa13.08□□□□□ -0.32
SAMM50-206ENST00000494795 KDM4FA0A1W2PPD8 638 aa13.08□□□□□ -0.32
SAMM50-206ENST00000494795 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-206ENST00000494795 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-206ENST00000494795 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 MST1RQ04912 1400 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 ATF3P18847 181 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 FLIIQ13045 1269 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
SAMM50-206ENST00000494795 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
SAMM50-206ENST00000494795 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-206ENST00000494795 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-206ENST00000494795 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
SAMM50-206ENST00000494795 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-206ENST00000494795 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
SAMM50-206ENST00000494795 TSHZ3Q63HK5 1081 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms