RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 USO1O60763 962 aaKnown RBP9.17□□□□□ -0.94
BRCA1-221ENST00000493795 KIF4BQ2VIQ3 1234 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 PPP6R1Q9UPN7 881 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 FAM177BA6PVY3 158 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 KIF18AQ8NI77 898 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 UBAC1Q9BSL1 405 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 TIGD1Q96MW7 591 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 SSX2IPQ9Y2D8 614 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 GNAI2P04899 355 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 RBM25P49756 843 aaKnown RBP9.16□□□□□ -0.94
BRCA1-221ENST00000493795 CBX1P83916 185 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 FBF1Q8TES7 1133 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 SREK1Q8WXA9 508 aaKnown RBP9.16□□□□□ -0.94
BRCA1-221ENST00000493795 SCLT1Q96NL6 688 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 CUX2O14529 1486 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 FGFR1OPO95684 399 aaKnown RBP9.16□□□□□ -0.94
BRCA1-221ENST00000493795 MAP3K11Q16584 847 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 NAP1L3Q99457 506 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-221ENST00000493795 NLRP2Q9NX02 1062 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 RBM5P52756 815 aaKnown RBP eCLIP9.16□□□□□ -0.94
BRCA1-221ENST00000493795 RAB3IL1Q8TBN0 382 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 RAI14Q9P0K7 980 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 TMCO5BA8MYB1 307 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 CTR9Q6PD62 1173 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 CTNNA3Q9UI47 895 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 USP47Q96K76 1375 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 ESPNB1AK53 854 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 HMOX1P09601 288 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 FERMT2Q96AC1 680 aa9.16□□□□□ -0.94
BRCA1-221ENST00000493795 URI1O94763 535 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-221ENST00000493795 DDX12PQ92771 950 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 ALS2CR12Q96Q35 445 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 FERMT1Q9BQL6 677 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 MACROD2A1Z1Q3 448 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 NOL3O60936 208 aaKnown RBP9.15□□□□□ -0.94
BRCA1-221ENST00000493795 CEP112Q8N8E3 955 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 PPP1R14CQ8TAE6 165 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 PHF23Q9BUL5 403 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-221ENST00000493795 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-221ENST00000493795 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 MIA2Q96PC5 1412 aa9.15□□□□□ -0.94
BRCA1-221ENST00000493795 BLOC1S2Q6QNY1 142 aa9.15□□□□□ -0.95
BRCA1-221ENST00000493795 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.95
BRCA1-221ENST00000493795 CLGNO14967 610 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 DDX46Q7L014 1031 aaKnown RBP9.14□□□□□ -0.95
BRCA1-221ENST00000493795 ZSCAN30Q86W11 494 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 GTF2F1P35269 517 aaKnown RBP eCLIP9.14□□□□□ -0.954e-8■■■□□ 16.5
BRCA1-221ENST00000493795 KRT32Q14532 448 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 CCDC6Q16204 474 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 PSMD1Q99460 953 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 YEATS4O95619 227 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 TDO2P48775 406 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 HLTFQ14527 1009 aaKnown RBP eCLIP9.14□□□□□ -0.953e-6■■□□□ 13.4
BRCA1-221ENST00000493795 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 CCDC160A6NGH7 325 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 TOP1P11387 765 aaKnown RBP9.14□□□□□ -0.95
BRCA1-221ENST00000493795 HSPA4P34932 840 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 MAATS1Q7Z4T9 603 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 IKBKGQ9Y6K9 419 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 KIF20AO95235 890 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 DNAAF4Q8WXU2 420 aa9.14□□□□□ -0.95
BRCA1-221ENST00000493795 USP5P45974 858 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 NSRP1Q9H0G5 558 aaKnown RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 ANO10Q9NW15 660 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 ANAPC4Q9UJX5 808 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 RRBP1Q9P2E9 1410 aaKnown RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 MNAT1P51948 309 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 KANK4Q5T7N3 995 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 WDR66Q8TBY9 1149 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 CCDC18Q5T9S5 1454 aa9.13□□□□□ -0.95
BRCA1-221ENST00000493795 PHAXQ9H814 394 aaKnown RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 SEC63Q9UGP8 760 aaKnown RBP9.13□□□□□ -0.95
BRCA1-221ENST00000493795 SPDYE4A6NLX3 237 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 MXRA7P84157 204 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 LRRC45Q96CN5 670 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 NUP88Q99567 741 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 DNA2P51530 1060 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 PLEKHO1Q53GL0 409 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 FAM114A1Q8IWE2 563 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 TMEM87AQ8NBN3 555 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 ATF3P18847 181 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 GTF2A1P52655 376 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 MRPS9P82933 396 aaKnown RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 JAKMIP1Q96N16 626 aaKnown RBP9.12□□□□□ -0.95
BRCA1-221ENST00000493795 UBA5Q9GZZ9 404 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 LMAN1P49257 510 aa9.12□□□□□ -0.95
BRCA1-221ENST00000493795 HSF2BPO75031 334 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 CCDC155Q8N6L0 562 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms