RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CHIC2Q9UKJ5 165 aa7.23□□□□□ -1.25
CLK1-213ENST00000492793 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
CLK1-213ENST00000492793 FAM200AQ8TCP9 573 aa7.22□□□□□ -1.25
CLK1-213ENST00000492793 SCTRP47872 440 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 CLDN10P78369 228 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 MYT1Q01538 1121 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 DPYDQ12882 1025 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 PTK7Q13308 1070 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 NNTQ13423 1086 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 PPP1R26Q5T8A7 1209 aaPredicted RBP7.21□□□□□ -1.26
CLK1-213ENST00000492793 CC2D2BQ6DHV5 1058 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 MPNDQ8N594 471 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 ZNF784Q8NCA9 323 aaPredicted RBP7.21□□□□□ -1.26
CLK1-213ENST00000492793 TPCN2Q8NHX9 752 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 SNIP1Q8TAD8 396 aaKnown RBP7.21□□□□□ -1.26
CLK1-213ENST00000492793 PGPEP1Q9NXJ5 209 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 PKD2L1Q9P0L9 805 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 USTQ9Y2C2 406 aa7.21□□□□□ -1.26
CLK1-213ENST00000492793 TMEM164Q5U3C3 297 aa7.2□□□□□ -1.26
CLK1-213ENST00000492793 CCDC102BQ68D86 513 aa7.2□□□□□ -1.26
CLK1-213ENST00000492793 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
CLK1-213ENST00000492793 STK32AQ8WU08 396 aa7.2□□□□□ -1.26
CLK1-213ENST00000492793 TRAIPQ9BWF2 469 aa7.2□□□□□ -1.26
CLK1-213ENST00000492793 ZMIZ1Q9ULJ6 1067 aa7.2□□□□□ -1.26
CLK1-213ENST00000492793 J3QL48 77 aa7.19□□□□□ -1.26
CLK1-213ENST00000492793 NR3C2P08235 984 aa7.19□□□□□ -1.26
CLK1-213ENST00000492793 ELOAQ14241 798 aaKnown RBP7.19□□□□□ -1.26
CLK1-213ENST00000492793 KIAA1024Q9UPX6 916 aa7.19□□□□□ -1.26
CLK1-213ENST00000492793 EMILIN1Q9Y6C2 1016 aa7.19□□□□□ -1.26
CLK1-213ENST00000492793 ZBTB7CA1YPR0 619 aa7.18□□□□□ -1.26
CLK1-213ENST00000492793 HINFPQ9BQA5 517 aa7.18□□□□□ -1.26
CLK1-213ENST00000492793 SFI1A8K8P3 1242 aa7.17□□□□□ -1.26
CLK1-213ENST00000492793 ZBTB7BO15156 539 aaPredicted RBP7.17□□□□□ -1.26
CLK1-213ENST00000492793 GDF9O60383 454 aa7.17□□□□□ -1.26
CLK1-213ENST00000492793 SEC13P55735 322 aa7.17□□□□□ -1.26
CLK1-213ENST00000492793 WDR4P57081 412 aaKnown RBP7.17□□□□□ -1.26
CLK1-213ENST00000492793 ERVK-9P63128 1117 aa7.17□□□□□ -1.26
CLK1-213ENST00000492793 PCDHGA11Q9Y5H2 935 aa7.17□□□□□ -1.26
CLK1-213ENST00000492793 LGR5O75473 907 aa7.16□□□□□ -1.26
CLK1-213ENST00000492793 ZIC2O95409 532 aaPredicted RBP7.16□□□□□ -1.26
CLK1-213ENST00000492793 TRIM26Q12899 539 aaPredicted RBP7.16□□□□□ -1.26
CLK1-213ENST00000492793 CYP2U1Q7Z449 544 aa7.16□□□□□ -1.26
CLK1-213ENST00000492793 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
CLK1-213ENST00000492793 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLK1-213ENST00000492793 OSBPL3Q9H4L5 887 aa7.16□□□□□ -1.26
CLK1-213ENST00000492793 TMEM88BA6NKF7 163 aa7.15□□□□□ -1.26
CLK1-213ENST00000492793 STAU1O95793 577 aaKnown RBP7.15□□□□□ -1.26
CLK1-213ENST00000492793 SIX5Q8N196 739 aa7.15□□□□□ -1.26
CLK1-213ENST00000492793 ITPKCQ96DU7 683 aa7.15□□□□□ -1.26
CLK1-213ENST00000492793 RAB6BQ9NRW1 208 aa7.15□□□□□ -1.26
CLK1-213ENST00000492793 SERTAD1Q9UHV2 236 aa7.15□□□□□ -1.26
CLK1-213ENST00000492793 ADD1P35611 737 aaKnown RBP7.14□□□□□ -1.27
CLK1-213ENST00000492793 GDF10P55107 478 aa7.14□□□□□ -1.27
CLK1-213ENST00000492793 CBLBQ13191 982 aa7.14□□□□□ -1.27
CLK1-213ENST00000492793 ZFAND3Q9H8U3 227 aa7.14□□□□□ -1.27
CLK1-213ENST00000492793 PDZRN3Q9UPQ7 1066 aa7.14□□□□□ -1.27
CLK1-213ENST00000492793 PRMT3O60678 531 aa7.13□□□□□ -1.27
CLK1-213ENST00000492793 LILRA1O75019 489 aa7.13□□□□□ -1.27
CLK1-213ENST00000492793 B4GALNT3Q6L9W6 998 aa7.13□□□□□ -1.27
CLK1-213ENST00000492793 TSEN2Q8NCE0 465 aaKnown RBP7.13□□□□□ -1.27
CLK1-213ENST00000492793 ARHGEF10LQ9HCE6 1279 aa7.13□□□□□ -1.27
CLK1-213ENST00000492793 TOR4AQ9NXH8 423 aa7.13□□□□□ -1.27
CLK1-213ENST00000492793 BACH1O14867 736 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 BRD1O95696 1058 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 ADH1AP07327 375 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 SMPD1P17405 629 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 RELBQ01201 579 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 ESCO1Q5FWF5 840 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 AGBL1Q96MI9 1066 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 ZNF358Q9NW07 568 aa7.12□□□□□ -1.27
CLK1-213ENST00000492793 FAM187AA6NFU0 413 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 MEN1O00255 615 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 GNRH1P01148 92 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 ATP2B4P23634 1241 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 PRR20EP86478 221 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 PRR20CP86479 221 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 PRR20DP86480 221 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 PRR20BP86481 221 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 PRR20AP86496 221 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 SWI5Q1ZZU3 235 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 TRIM67Q6ZTA4 783 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 HPS1Q92902 700 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 ETNK1Q9HBU6 452 aa7.11□□□□□ -1.27
CLK1-213ENST00000492793 TMEM229AB2RXF0 380 aa7.1□□□□□ -1.27
CLK1-213ENST00000492793 INHAP05111 366 aa7.1□□□□□ -1.27
CLK1-213ENST00000492793 TIMP2P16035 220 aa7.1□□□□□ -1.27
CLK1-213ENST00000492793 CLP1Q92989 425 aaKnown RBP7.1□□□□□ -1.27
CLK1-213ENST00000492793 NLRP3Q96P20 1036 aa7.1□□□□□ -1.27
CLK1-213ENST00000492793 ZNF395Q9H8N7 513 aaPredicted RBP7.1□□□□□ -1.27
CLK1-213ENST00000492793 PODXL2Q9NZ53 605 aa7.1□□□□□ -1.27
CLK1-213ENST00000492793 CAPN5O15484 640 aaPredicted RBP7.09□□□□□ -1.27
CLK1-213ENST00000492793 DKK1O94907 266 aa7.09□□□□□ -1.27
CLK1-213ENST00000492793 UPP2O95045 317 aa7.09□□□□□ -1.27
CLK1-213ENST00000492793 SCNN1DP51172 638 aa7.09□□□□□ -1.27
CLK1-213ENST00000492793 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
CLK1-213ENST00000492793 TNS4Q8IZW8 715 aa7.09□□□□□ -1.27
CLK1-213ENST00000492793 CHMP7Q8WUX9 453 aaPredicted RBP7.09□□□□□ -1.27
CLK1-213ENST00000492793 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms