RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 FAM98CQ17RN3 349 aaKnown RBP24.32■■□□□ 1.48
PRDM2-209ENST00000491134 PLEKHF1Q96S99 279 aa24.32■■□□□ 1.48
PRDM2-209ENST00000491134 CDCA7Q9BWT1 371 aaPredicted RBP24.31■■□□□ 1.48
PRDM2-209ENST00000491134 RAPGEF4Q8WZA2 1011 aa24.3■■□□□ 1.48
PRDM2-209ENST00000491134 BRWD3Q6RI45 1802 aa24.29■■□□□ 1.48
PRDM2-209ENST00000491134 PRKAR2BP31323 418 aa24.29■■□□□ 1.48
PRDM2-209ENST00000491134 TATP17735 454 aaPredicted RBP24.28■■□□□ 1.48
PRDM2-209ENST00000491134 RXRBP28702 533 aa24.28■■□□□ 1.48
PRDM2-209ENST00000491134 PHACTR3Q96KR7 559 aa24.28■■□□□ 1.48
PRDM2-209ENST00000491134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.28■■□□□ 1.48
PRDM2-209ENST00000491134 TNS2Q63HR2 1409 aa24.27■■□□□ 1.48
PRDM2-209ENST00000491134 RGS12O14924 1447 aa24.25■■□□□ 1.47
PRDM2-209ENST00000491134 SEPT12Q8IYM1 358 aa24.24■■□□□ 1.47
PRDM2-209ENST00000491134 FAM9BQ8IZU0 186 aa24.24■■□□□ 1.47
PRDM2-209ENST00000491134 ZCRB1Q8TBF4 217 aaKnown RBP24.23■■□□□ 1.47
PRDM2-209ENST00000491134 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
PRDM2-209ENST00000491134 RUNDC1Q96C34 613 aa24.22■■□□□ 1.47
PRDM2-209ENST00000491134 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
PRDM2-209ENST00000491134 MTHFSDQ2M296 383 aaKnown RBP24.21■■□□□ 1.47
PRDM2-209ENST00000491134 AMOTQ4VCS5 1084 aa24.21■■□□□ 1.47
PRDM2-209ENST00000491134 PLEKHO1Q53GL0 409 aaPredicted RBP24.21■■□□□ 1.47
PRDM2-209ENST00000491134 CCDC146Q8IYE0 955 aa24.21■■□□□ 1.47
PRDM2-209ENST00000491134 EXOC5O00471 708 aa24.2■■□□□ 1.46
PRDM2-209ENST00000491134 CYP27B1O15528 508 aa24.2■■□□□ 1.46
PRDM2-209ENST00000491134 DDB1Q16531 1140 aa24.2■■□□□ 1.46
PRDM2-209ENST00000491134 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
PRDM2-209ENST00000491134 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
PRDM2-209ENST00000491134 VIRMAQ69YN4 1812 aaKnown RBP24.18■■□□□ 1.46
PRDM2-209ENST00000491134 EP400Q96L91 3159 aa24.17■■□□□ 1.46
PRDM2-209ENST00000491134 MARCH10Q8NA82 808 aaPredicted RBP24.17■■□□□ 1.46
PRDM2-209ENST00000491134 PCDH11XQ9BZA7 1347 aa24.16■■□□□ 1.46
PRDM2-209ENST00000491134 PCDH11YQ9BZA8 1340 aa24.16■■□□□ 1.46
PRDM2-209ENST00000491134 PHKG2P15735 406 aa24.15■■□□□ 1.46
PRDM2-209ENST00000491134 NKX1-1Q15270 411 aaPredicted RBP24.15■■□□□ 1.46
PRDM2-209ENST00000491134 NFE2L2Q16236 605 aa24.15■■□□□ 1.46
PRDM2-209ENST00000491134 ZNF530Q6P9A1 599 aaPredicted RBP24.15■■□□□ 1.46
PRDM2-209ENST00000491134 GAS2L2Q8NHY3 880 aa24.15■■□□□ 1.46
PRDM2-209ENST00000491134 TMPOP42166 694 aaKnown RBP24.14■■□□□ 1.45
PRDM2-209ENST00000491134 SCN11AQ9UI33 1791 aa24.14■■□□□ 1.45
PRDM2-209ENST00000491134 MAPK8IP3Q9UPT6 1336 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 TOGARAM1Q9Y4F4 1720 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 BCL9O00512 1426 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 A0A0G2JS52 829 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 APAF1O14727 1248 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 MYT1Q01538 1121 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 AKAP4Q5JQC9 854 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 IFNL2Q8IZJ0 200 aa24.13■■□□□ 1.45
PRDM2-209ENST00000491134 DDX54Q8TDD1 881 aaKnown RBP24.12■■□□□ 1.45
PRDM2-209ENST00000491134 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
PRDM2-209ENST00000491134 KDM6AO15550 1401 aaPredicted RBP24.11■■□□□ 1.45
PRDM2-209ENST00000491134 NEFMP07197 916 aa24.1■■□□□ 1.45
PRDM2-209ENST00000491134 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
PRDM2-209ENST00000491134 KRT27Q7Z3Y8 459 aa24.1■■□□□ 1.45
PRDM2-209ENST00000491134 MAP3K5Q99683 1374 aa24.1■■□□□ 1.45
PRDM2-209ENST00000491134 NCBP3Q53F19 620 aaKnown RBP24.09■■□□□ 1.45
PRDM2-209ENST00000491134 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
PRDM2-209ENST00000491134 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
PRDM2-209ENST00000491134 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.45
PRDM2-209ENST00000491134 RRP7AQ9Y3A4 280 aaKnown RBP24.08■■□□□ 1.45
PRDM2-209ENST00000491134 ITGB4P16144 1822 aa24.07■■□□□ 1.44
PRDM2-209ENST00000491134 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
PRDM2-209ENST00000491134 CEMIPQ8WUJ3 1361 aa24.07■■□□□ 1.44
PRDM2-209ENST00000491134 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
PRDM2-209ENST00000491134 RIPK4P57078 832 aa24.07■■□□□ 1.44
PRDM2-209ENST00000491134 FAM182BQ5T319 152 aa24.06■■□□□ 1.44
PRDM2-209ENST00000491134 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
PRDM2-209ENST00000491134 SIPA1L3O60292 1781 aaPredicted RBP24.06■■□□□ 1.44
PRDM2-209ENST00000491134 DCAF5Q96JK2 942 aa24.05■■□□□ 1.44
PRDM2-209ENST00000491134 LGR6Q9HBX8 967 aa24.05■■□□□ 1.44
PRDM2-209ENST00000491134 KAT6BQ8WYB5 2073 aa24.05■■□□□ 1.44
PRDM2-209ENST00000491134 MRC1P22897 1456 aa24.05■■□□□ 1.44
PRDM2-209ENST00000491134 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
PRDM2-209ENST00000491134 HSP90AB1P08238 724 aaKnown RBP24.04■■□□□ 1.44
PRDM2-209ENST00000491134 MPRIPQ6WCQ1 1025 aa24.04■■□□□ 1.44
PRDM2-209ENST00000491134 CCDC27Q2M243 656 aa24.03■■□□□ 1.44
PRDM2-209ENST00000491134 NHSQ6T4R5 1651 aa24.02■■□□□ 1.44
PRDM2-209ENST00000491134 SENP3-EIF4A1A0A087X0R7 540 aa24.02■■□□□ 1.44
PRDM2-209ENST00000491134 NEUROD2Q15784 382 aa24.02■■□□□ 1.44
PRDM2-209ENST00000491134 DCTN1Q14203 1278 aa24.01■■□□□ 1.43
PRDM2-209ENST00000491134 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
PRDM2-209ENST00000491134 ERVV-2B6SEH9 535 aa24■■□□□ 1.43
PRDM2-209ENST00000491134 FAM196AQ6ZSG2 479 aa24■■□□□ 1.43
PRDM2-209ENST00000491134 MCM10Q7L590 875 aa24■■□□□ 1.43
PRDM2-209ENST00000491134 ZNF521Q96K83 1311 aa24■■□□□ 1.43
PRDM2-209ENST00000491134 LMOD3Q0VAK6 560 aa23.98■■□□□ 1.43
PRDM2-209ENST00000491134 WWC1Q8IX03 1113 aa23.98■■□□□ 1.43
PRDM2-209ENST00000491134 RTF1Q92541 710 aaKnown RBP23.97■■□□□ 1.43
PRDM2-209ENST00000491134 THUMPD2Q9BTF0 503 aaKnown RBP23.97■■□□□ 1.43
PRDM2-209ENST00000491134 KCNQ2O43526 872 aa23.96■■□□□ 1.43
PRDM2-209ENST00000491134 PTF1AQ7RTS3 328 aa23.96■■□□□ 1.43
PRDM2-209ENST00000491134 SLC52A2Q9HAB3 445 aa23.96■■□□□ 1.43
PRDM2-209ENST00000491134 PRIM1P49642 420 aaKnown RBP23.95■■□□□ 1.42
PRDM2-209ENST00000491134 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
PRDM2-209ENST00000491134 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
PRDM2-209ENST00000491134 BTAF1O14981 1849 aa23.95■■□□□ 1.42
PRDM2-209ENST00000491134 TNS1Q9HBL0 1735 aaKnown RBP23.94■■□□□ 1.42
PRDM2-209ENST00000491134 PAPPAQ13219 1627 aa23.94■■□□□ 1.42
PRDM2-209ENST00000491134 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
PRDM2-209ENST00000491134 PIGBQ92521 554 aa23.93■■□□□ 1.42
PRDM2-209ENST00000491134 SALL2Q9Y467 1007 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms