RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 APAF1O14727 1248 aa17.44■□□□□ 0.38
SNX12-205ENST00000490561 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
SNX12-205ENST00000490561 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
SNX12-205ENST00000490561 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
SNX12-205ENST00000490561 OVOS2A0A0G2JMS6 1433 aa17.44■□□□□ 0.38
SNX12-205ENST00000490561 ATRNO75882 1429 aa17.44■□□□□ 0.38
SNX12-205ENST00000490561 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
SNX12-205ENST00000490561 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
SNX12-205ENST00000490561 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
SNX12-205ENST00000490561 MEGF6O75095 1541 aa17.42■□□□□ 0.38
SNX12-205ENST00000490561 DISP2A7MBM2 1401 aa17.42■□□□□ 0.38
SNX12-205ENST00000490561 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
SNX12-205ENST00000490561 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
SNX12-205ENST00000490561 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
SNX12-205ENST00000490561 RIPK4P57078 832 aa17.4■□□□□ 0.38
SNX12-205ENST00000490561 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
SNX12-205ENST00000490561 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
SNX12-205ENST00000490561 PKD1L3Q7Z443 1732 aa17.4■□□□□ 0.38
SNX12-205ENST00000490561 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
SNX12-205ENST00000490561 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.37
SNX12-205ENST00000490561 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
SNX12-205ENST00000490561 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
SNX12-205ENST00000490561 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
SNX12-205ENST00000490561 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
SNX12-205ENST00000490561 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
SNX12-205ENST00000490561 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
SNX12-205ENST00000490561 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
SNX12-205ENST00000490561 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
SNX12-205ENST00000490561 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
SNX12-205ENST00000490561 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
SNX12-205ENST00000490561 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
SNX12-205ENST00000490561 GNAT3A8MTJ3 354 aa17.37■□□□□ 0.37
SNX12-205ENST00000490561 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
SNX12-205ENST00000490561 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
SNX12-205ENST00000490561 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
SNX12-205ENST00000490561 EXOC5O00471 708 aa17.36■□□□□ 0.37
SNX12-205ENST00000490561 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
SNX12-205ENST00000490561 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
SNX12-205ENST00000490561 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
SNX12-205ENST00000490561 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
SNX12-205ENST00000490561 GLI3P10071 1580 aa17.35■□□□□ 0.37
SNX12-205ENST00000490561 DDB1Q16531 1140 aa17.34■□□□□ 0.37
SNX12-205ENST00000490561 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
SNX12-205ENST00000490561 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
SNX12-205ENST00000490561 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
SNX12-205ENST00000490561 IL16Q14005 1332 aa17.33■□□□□ 0.36
SNX12-205ENST00000490561 ZNF521Q96K83 1311 aa17.33■□□□□ 0.36
SNX12-205ENST00000490561 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.36
SNX12-205ENST00000490561 PHKG2P15735 406 aa17.33■□□□□ 0.36
SNX12-205ENST00000490561 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
SNX12-205ENST00000490561 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
SNX12-205ENST00000490561 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
SNX12-205ENST00000490561 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
SNX12-205ENST00000490561 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
SNX12-205ENST00000490561 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
SNX12-205ENST00000490561 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
SNX12-205ENST00000490561 CYP27B1O15528 508 aa17.3■□□□□ 0.36
SNX12-205ENST00000490561 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
SNX12-205ENST00000490561 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
SNX12-205ENST00000490561 A0A0G2JS52 829 aa17.29■□□□□ 0.36
SNX12-205ENST00000490561 E9PSI1 815 aa17.29■□□□□ 0.36
SNX12-205ENST00000490561 MYT1Q01538 1121 aa17.29■□□□□ 0.36
SNX12-205ENST00000490561 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
SNX12-205ENST00000490561 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
SNX12-205ENST00000490561 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
SNX12-205ENST00000490561 RXRBP28702 533 aa17.28■□□□□ 0.36
SNX12-205ENST00000490561 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
SNX12-205ENST00000490561 ADAMTS7Q9UKP4 1686 aa17.28■□□□□ 0.36
SNX12-205ENST00000490561 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
SNX12-205ENST00000490561 GNAI1P63096 354 aa17.27■□□□□ 0.36
SNX12-205ENST00000490561 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
SNX12-205ENST00000490561 IFT57Q9NWB7 429 aa17.27■□□□□ 0.36
SNX12-205ENST00000490561 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
SNX12-205ENST00000490561 TEFQ10587 303 aa17.26■□□□□ 0.35
SNX12-205ENST00000490561 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
SNX12-205ENST00000490561 MCM10Q7L590 875 aa17.26■□□□□ 0.35
SNX12-205ENST00000490561 SEPT12Q8IYM1 358 aa17.26■□□□□ 0.35
SNX12-205ENST00000490561 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
SNX12-205ENST00000490561 KDM6AO15550 1401 aaPredicted RBP17.25■□□□□ 0.35
SNX12-205ENST00000490561 MRC1P22897 1456 aa17.24■□□□□ 0.35
SNX12-205ENST00000490561 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
SNX12-205ENST00000490561 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
SNX12-205ENST00000490561 RGS17Q9UGC6 210 aaPredicted RBP17.24■□□□□ 0.35
SNX12-205ENST00000490561 BCL9O00512 1426 aa17.23■□□□□ 0.35
SNX12-205ENST00000490561 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
SNX12-205ENST00000490561 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
SNX12-205ENST00000490561 SLFN5Q08AF3 891 aa17.23■□□□□ 0.35
SNX12-205ENST00000490561 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
SNX12-205ENST00000490561 LGR6Q9HBX8 967 aa17.23■□□□□ 0.35
SNX12-205ENST00000490561 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
SNX12-205ENST00000490561 CABP4P57796 275 aa17.22■□□□□ 0.35
SNX12-205ENST00000490561 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
SNX12-205ENST00000490561 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
SNX12-205ENST00000490561 SLC52A2Q9HAB3 445 aa17.22■□□□□ 0.35
SNX12-205ENST00000490561 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
SNX12-205ENST00000490561 CHL1O00533 1208 aa17.2■□□□□ 0.34
SNX12-205ENST00000490561 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
SNX12-205ENST00000490561 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
SNX12-205ENST00000490561 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
SNX12-205ENST00000490561 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms