RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CC2D2BQ6DHV5 1058 aa7.39□□□□□ -1.23
CD46-216ENST00000490278 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
CD46-216ENST00000490278 RETREG2Q8NC44 543 aa7.39□□□□□ -1.23
CD46-216ENST00000490278 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
CD46-216ENST00000490278 POTECB2RU33 542 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L15C9J2P7 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L10C9JJH3 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L13C9JLJ4 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L12C9JPN9 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L11C9JVI0 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L21D6R901 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L18D6R9N7 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L22D6RA61 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L17D6RBQ6 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L19D6RCP7 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L20D6RJB6 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 J3QL48 77 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 CSB-PGBD3P0DP91 1061 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 SCTRP47872 440 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 GTF2IP78347 998 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 MYT1Q01538 1121 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 USP17L24Q0WX57 530 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 ELOAQ14241 798 aaKnown RBP7.38□□□□□ -1.23
CD46-216ENST00000490278 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
CD46-216ENST00000490278 ZNF784Q8NCA9 323 aaPredicted RBP7.38□□□□□ -1.23
CD46-216ENST00000490278 CYLDQ9NQC7 956 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 DNAAF2Q9NVR5 837 aaKnown RBP7.38□□□□□ -1.23
CD46-216ENST00000490278 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
CD46-216ENST00000490278 CLDN10P78369 228 aa7.37□□□□□ -1.23
CD46-216ENST00000490278 PTK7Q13308 1070 aa7.37□□□□□ -1.23
CD46-216ENST00000490278 LARGE2Q8N3Y3 721 aa7.37□□□□□ -1.23
CD46-216ENST00000490278 LILRA1O75019 489 aa7.36□□□□□ -1.23
CD46-216ENST00000490278 DGAT1O75907 488 aa7.36□□□□□ -1.23
CD46-216ENST00000490278 SMPD1P17405 629 aa7.36□□□□□ -1.23
CD46-216ENST00000490278 PSME1Q06323 249 aa7.36□□□□□ -1.23
CD46-216ENST00000490278 PDE4CQ08493 712 aa7.36□□□□□ -1.23
CD46-216ENST00000490278 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
CD46-216ENST00000490278 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
CD46-216ENST00000490278 PCDHGA11Q9Y5H2 935 aa7.36□□□□□ -1.23
CD46-216ENST00000490278 ZBTB7BO15156 539 aaPredicted RBP7.35□□□□□ -1.23
CD46-216ENST00000490278 PDIA4P13667 645 aaKnown RBP7.35□□□□□ -1.23
CD46-216ENST00000490278 ANKMY2Q8IV38 441 aa7.35□□□□□ -1.23
CD46-216ENST00000490278 ZNF594Q96JF6 807 aaPredicted RBP7.35□□□□□ -1.23
CD46-216ENST00000490278 OSBPL3Q9H4L5 887 aa7.35□□□□□ -1.23
CD46-216ENST00000490278 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
CD46-216ENST00000490278 USTQ9Y2C2 406 aa7.35□□□□□ -1.23
CD46-216ENST00000490278 PKDCCQ504Y2 493 aa7.34□□□□□ -1.23
CD46-216ENST00000490278 TREML4Q6UXN2 200 aa7.34□□□□□ -1.23
CD46-216ENST00000490278 CYP2U1Q7Z449 544 aa7.34□□□□□ -1.23
CD46-216ENST00000490278 SIX5Q8N196 739 aa7.34□□□□□ -1.23
CD46-216ENST00000490278 FAM200AQ8TCP9 573 aa7.34□□□□□ -1.23
CD46-216ENST00000490278 KLF16Q9BXK1 252 aaPredicted RBP7.34□□□□□ -1.23
CD46-216ENST00000490278 KIAA1024Q9UPX6 916 aa7.34□□□□□ -1.23
CD46-216ENST00000490278 RBM19Q9Y4C8 960 aaKnown RBP7.34□□□□□ -1.23
CD46-216ENST00000490278 ZIC2O95409 532 aaPredicted RBP7.33□□□□□ -1.24
CD46-216ENST00000490278 ADD1P35611 737 aaKnown RBP7.33□□□□□ -1.24
CD46-216ENST00000490278 WDR4P57081 412 aaKnown RBP7.33□□□□□ -1.24
CD46-216ENST00000490278 DPYDQ12882 1025 aa7.33□□□□□ -1.24
CD46-216ENST00000490278 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
CD46-216ENST00000490278 TPCN2Q8NHX9 752 aa7.33□□□□□ -1.24
CD46-216ENST00000490278 STK32AQ8WU08 396 aa7.33□□□□□ -1.24
CD46-216ENST00000490278 ITPKCQ96DU7 683 aa7.33□□□□□ -1.24
CD46-216ENST00000490278 DKK1O94907 266 aa7.32□□□□□ -1.24
CD46-216ENST00000490278 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
CD46-216ENST00000490278 HPS1Q92902 700 aa7.32□□□□□ -1.24
CD46-216ENST00000490278 TRAIPQ9BWF2 469 aa7.32□□□□□ -1.24
CD46-216ENST00000490278 TMEM88BA6NKF7 163 aa7.31□□□□□ -1.24
CD46-216ENST00000490278 TIMP2P16035 220 aa7.31□□□□□ -1.24
CD46-216ENST00000490278 SEC13P55735 322 aa7.31□□□□□ -1.24
CD46-216ENST00000490278 Q6ZVU0 165 aa7.31□□□□□ -1.24
CD46-216ENST00000490278 ZFAND3Q9H8U3 227 aa7.31□□□□□ -1.24
CD46-216ENST00000490278 GNRH1P01148 92 aa7.3□□□□□ -1.24
CD46-216ENST00000490278 ADH1AP07327 375 aa7.3□□□□□ -1.24
CD46-216ENST00000490278 CBLBQ13191 982 aa7.3□□□□□ -1.24
CD46-216ENST00000490278 CARNS1A5YM72 827 aa7.29□□□□□ -1.24
CD46-216ENST00000490278 WASLO00401 505 aaPredicted RBP7.29□□□□□ -1.24
CD46-216ENST00000490278 SCNN1DP51172 638 aa7.29□□□□□ -1.24
CD46-216ENST00000490278 ESCO1Q5FWF5 840 aa7.29□□□□□ -1.24
CD46-216ENST00000490278 FAM187AA6NFU0 413 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 SFI1A8K8P3 1242 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 M0R2N6 131 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 BACH1O14867 736 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 INHAP05111 366 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 GDF10P55107 478 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 SWI5Q1ZZU3 235 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.28□□□□□ -1.24
CD46-216ENST00000490278 ETNK1Q9HBU6 452 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 ARHGEF10LQ9HCE6 1279 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 ZNF358Q9NW07 568 aa7.28□□□□□ -1.24
CD46-216ENST00000490278 CAPN5O15484 640 aaPredicted RBP7.27□□□□□ -1.25
CD46-216ENST00000490278 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
CD46-216ENST00000490278 FAM69CQ0P6D2 419 aa7.27□□□□□ -1.25
CD46-216ENST00000490278 KDF1Q8NAX2 398 aaPredicted RBP7.27□□□□□ -1.25
CD46-216ENST00000490278 A0A1W2PRU2 124 aa7.26□□□□□ -1.25
CD46-216ENST00000490278 AVPP01185 164 aa7.26□□□□□ -1.25
CD46-216ENST00000490278 PTGIRP43119 386 aa7.26□□□□□ -1.25
CD46-216ENST00000490278 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
CD46-216ENST00000490278 AGBL1Q96MI9 1066 aa7.26□□□□□ -1.25
CD46-216ENST00000490278 RAB6BQ9NRW1 208 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms