RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CFAP53Q96M91 514 aa23.62■■□□□ 1.37
COL16A1-215ENST00000488897 SULT6B1Q6IMI4 303 aa23.61■■□□□ 1.37
COL16A1-215ENST00000488897 COL3A1P02461 1466 aaPredicted RBP23.61■■□□□ 1.37
COL16A1-215ENST00000488897 COL5A2P05997 1499 aaPredicted RBP23.6■■□□□ 1.37
COL16A1-215ENST00000488897 BCL9LQ86UU0 1499 aa23.6■■□□□ 1.37
COL16A1-215ENST00000488897 DDRGK1Q96HY6 314 aa23.6■■□□□ 1.37
COL16A1-215ENST00000488897 CDK12Q9NYV4 1490 aaPredicted RBP23.59■■□□□ 1.37
COL16A1-215ENST00000488897 LMO7Q8WWI1 1683 aa23.58■■□□□ 1.37
COL16A1-215ENST00000488897 RGS17Q9UGC6 210 aaPredicted RBP23.58■■□□□ 1.36
COL16A1-215ENST00000488897 PLCH1Q4KWH8 1693 aa23.57■■□□□ 1.36
COL16A1-215ENST00000488897 UNC5CLQ8IV45 518 aa23.57■■□□□ 1.36
COL16A1-215ENST00000488897 APAF1O14727 1248 aa23.56■■□□□ 1.36
COL16A1-215ENST00000488897 FNBP4Q8N3X1 1017 aaPredicted RBP23.56■■□□□ 1.36
COL16A1-215ENST00000488897 SLIT2O94813 1529 aa23.55■■□□□ 1.36
COL16A1-215ENST00000488897 WDR17Q8IZU2 1322 aa23.55■■□□□ 1.36
COL16A1-215ENST00000488897 E9PSI1 815 aa23.55■■□□□ 1.36
COL16A1-215ENST00000488897 PHACTR3Q96KR7 559 aa23.54■■□□□ 1.36
COL16A1-215ENST00000488897 COL14A1Q05707 1796 aaKnown RBP23.54■■□□□ 1.36
COL16A1-215ENST00000488897 QTRT2Q9H974 415 aaKnown RBP23.53■■□□□ 1.36
COL16A1-215ENST00000488897 RRP7AQ9Y3A4 280 aaKnown RBP23.53■■□□□ 1.36
COL16A1-215ENST00000488897 RTL1A6NKG5 1358 aa23.53■■□□□ 1.36
COL16A1-215ENST00000488897 NEUROD2Q15784 382 aa23.53■■□□□ 1.36
COL16A1-215ENST00000488897 FAM98CQ17RN3 349 aaKnown RBP23.53■■□□□ 1.36
COL16A1-215ENST00000488897 SKAP1Q86WV1 359 aa23.52■■□□□ 1.36
COL16A1-215ENST00000488897 PRKAR2BP31323 418 aa23.52■■□□□ 1.36
COL16A1-215ENST00000488897 A0A0G2JS52 829 aa23.51■■□□□ 1.35
COL16A1-215ENST00000488897 FAM182BQ5T319 152 aa23.5■■□□□ 1.35
COL16A1-215ENST00000488897 POTEAQ6S8J7 498 aa23.5■■□□□ 1.35
COL16A1-215ENST00000488897 PHF23Q9BUL5 403 aaPredicted RBP23.5■■□□□ 1.35
COL16A1-215ENST00000488897 SPINK5Q9NQ38 1064 aaPredicted RBP23.49■■□□□ 1.35
COL16A1-215ENST00000488897 IGSF1Q8N6C5 1336 aa23.49■■□□□ 1.35
COL16A1-215ENST00000488897 FAM161AQ3B820 660 aa23.49■■□□□ 1.35
COL16A1-215ENST00000488897 RSPH6AQ9H0K4 717 aa23.48■■□□□ 1.35
COL16A1-215ENST00000488897 KIF24Q5T7B8 1368 aa23.47■■□□□ 1.35
COL16A1-215ENST00000488897 SPATA31A1Q5TZJ5 1347 aa23.47■■□□□ 1.35
COL16A1-215ENST00000488897 NRAPQ86VF7 1730 aa23.46■■□□□ 1.35
COL16A1-215ENST00000488897 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
COL16A1-215ENST00000488897 CRB1P82279 1406 aa23.46■■□□□ 1.35
COL16A1-215ENST00000488897 SPATA31A5Q5VU36 1347 aa23.46■■□□□ 1.35
COL16A1-215ENST00000488897 SPATA31A7Q8IWB4 1347 aa23.46■■□□□ 1.35
COL16A1-215ENST00000488897 CARD10Q9BWT7 1032 aa23.45■■□□□ 1.35
COL16A1-215ENST00000488897 NEFMP07197 916 aa23.45■■□□□ 1.34
COL16A1-215ENST00000488897 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
COL16A1-215ENST00000488897 MEGF6O75095 1541 aa23.44■■□□□ 1.34
COL16A1-215ENST00000488897 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
COL16A1-215ENST00000488897 VPS72Q15906 364 aa23.43■■□□□ 1.34
COL16A1-215ENST00000488897 BCAR3O75815 825 aa23.43■■□□□ 1.34
COL16A1-215ENST00000488897 TCP11L2Q8N4U5 519 aa23.43■■□□□ 1.34
COL16A1-215ENST00000488897 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
COL16A1-215ENST00000488897 PDE3AQ14432 1141 aa23.42■■□□□ 1.34
COL16A1-215ENST00000488897 MTHFSDQ2M296 383 aaKnown RBP23.42■■□□□ 1.34
COL16A1-215ENST00000488897 C8orf34Q49A92 452 aa23.42■■□□□ 1.34
COL16A1-215ENST00000488897 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
COL16A1-215ENST00000488897 RAPGEF4Q8WZA2 1011 aa23.41■■□□□ 1.34
COL16A1-215ENST00000488897 TRPC5Q9UL62 973 aaPredicted RBP23.41■■□□□ 1.34
COL16A1-215ENST00000488897 DCTN1Q14203 1278 aa23.41■■□□□ 1.34
COL16A1-215ENST00000488897 WWC1Q8IX03 1113 aa23.4■■□□□ 1.34
COL16A1-215ENST00000488897 FAM208AQ9UK61 1670 aaKnown RBP23.39■■□□□ 1.34
COL16A1-215ENST00000488897 IL2RBP14784 551 aa23.39■■□□□ 1.34
COL16A1-215ENST00000488897 FCHSD2O94868 740 aa23.39■■□□□ 1.33
COL16A1-215ENST00000488897 THUMPD2Q9BTF0 503 aaKnown RBP23.39■■□□□ 1.33
COL16A1-215ENST00000488897 DAXXQ9UER7 740 aaPredicted RBP23.39■■□□□ 1.33
COL16A1-215ENST00000488897 NWD2Q9ULI1 1742 aa23.38■■□□□ 1.33
COL16A1-215ENST00000488897 GLI3P10071 1580 aa23.37■■□□□ 1.33
COL16A1-215ENST00000488897 KDRP35968 1356 aa23.36■■□□□ 1.33
COL16A1-215ENST00000488897 TATP17735 454 aaPredicted RBP23.36■■□□□ 1.33
COL16A1-215ENST00000488897 RGS3P49796 1198 aa23.36■■□□□ 1.33
COL16A1-215ENST00000488897 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
COL16A1-215ENST00000488897 ATRNO75882 1429 aa23.36■■□□□ 1.33
COL16A1-215ENST00000488897 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
COL16A1-215ENST00000488897 CYP27B1O15528 508 aa23.34■■□□□ 1.33
COL16A1-215ENST00000488897 MPRIPQ6WCQ1 1025 aa23.34■■□□□ 1.33
COL16A1-215ENST00000488897 SEPT12Q8IYM1 358 aa23.34■■□□□ 1.33
COL16A1-215ENST00000488897 MCM10Q7L590 875 aa23.33■■□□□ 1.33
COL16A1-215ENST00000488897 MAPK8IP3Q9UPT6 1336 aa23.33■■□□□ 1.33
COL16A1-215ENST00000488897 ABCC6O95255 1503 aa23.33■■□□□ 1.33
COL16A1-215ENST00000488897 CANXP27824 592 aaKnown RBP23.33■■□□□ 1.33
COL16A1-215ENST00000488897 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
COL16A1-215ENST00000488897 ZCRB1Q8TBF4 217 aaKnown RBP23.32■■□□□ 1.32
COL16A1-215ENST00000488897 KAT6BQ8WYB5 2073 aa23.32■■□□□ 1.32
COL16A1-215ENST00000488897 RXRBP28702 533 aa23.32■■□□□ 1.32
COL16A1-215ENST00000488897 LGR6Q9HBX8 967 aa23.32■■□□□ 1.32
COL16A1-215ENST00000488897 RIPK4P57078 832 aa23.31■■□□□ 1.32
COL16A1-215ENST00000488897 AAMPQ13685 434 aa23.31■■□□□ 1.32
COL16A1-215ENST00000488897 CLUAP1Q96AJ1 413 aa23.31■■□□□ 1.32
COL16A1-215ENST00000488897 DDB1Q16531 1140 aa23.31■■□□□ 1.32
COL16A1-215ENST00000488897 WDR63Q8IWG1 891 aa23.31■■□□□ 1.32
COL16A1-215ENST00000488897 EXOC5O00471 708 aa23.3■■□□□ 1.32
COL16A1-215ENST00000488897 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
COL16A1-215ENST00000488897 IGHDP01880 384 aa23.29■■□□□ 1.32
COL16A1-215ENST00000488897 NCAPD2Q15021 1401 aa23.29■■□□□ 1.32
COL16A1-215ENST00000488897 RBM6P78332 1123 aaKnown RBP23.29■■□□□ 1.32
COL16A1-215ENST00000488897 NCBP3Q53F19 620 aaKnown RBP23.29■■□□□ 1.32
COL16A1-215ENST00000488897 PTF1AQ7RTS3 328 aa23.29■■□□□ 1.32
COL16A1-215ENST00000488897 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
COL16A1-215ENST00000488897 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
COL16A1-215ENST00000488897 DISP2A7MBM2 1401 aa23.28■■□□□ 1.32
COL16A1-215ENST00000488897 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
COL16A1-215ENST00000488897 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
COL16A1-215ENST00000488897 PLEKHO1Q53GL0 409 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms