RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 INSM1Q01101 510 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-217ENST00000488087 ZNF784Q8NCA9 323 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-217ENST00000488087 MKRN1Q9UHC7 482 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-217ENST00000488087 NOD1Q9Y239 953 aa7.38□□□□□ -1.23
ECHDC1-217ENST00000488087 ZIC2O95409 532 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-217ENST00000488087 SCTRP47872 440 aa7.37□□□□□ -1.23
ECHDC1-217ENST00000488087 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
ECHDC1-217ENST00000488087 HPS1Q92902 700 aa7.37□□□□□ -1.23
ECHDC1-217ENST00000488087 PBXIP1Q96AQ6 731 aa7.37□□□□□ -1.23
ECHDC1-217ENST00000488087 ATP5J2-PTCD1G3V325 749 aa7.36□□□□□ -1.23
ECHDC1-217ENST00000488087 PSME1Q06323 249 aa7.36□□□□□ -1.23
ECHDC1-217ENST00000488087 TRIM50Q86XT4 487 aa7.36□□□□□ -1.23
ECHDC1-217ENST00000488087 AAASQ9NRG9 546 aa7.36□□□□□ -1.23
ECHDC1-217ENST00000488087 ACIN1Q9UKV3 1341 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 ST8SIA5O15466 376 aa7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 PPP1R15AO75807 674 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 RASA1P20936 1047 aa7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 ATP1A2P50993 1020 aa7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 ERVK-9P63128 1117 aa7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 LARP1Q6PKG0 1096 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 ITPKCQ96DU7 683 aa7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 ZFAND3Q9H8U3 227 aa7.35□□□□□ -1.23
ECHDC1-217ENST00000488087 GTF2IP78347 998 aa7.34□□□□□ -1.23
ECHDC1-217ENST00000488087 KANK4Q5T7N3 995 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-217ENST00000488087 OGFOD1Q8N543 542 aa7.34□□□□□ -1.23
ECHDC1-217ENST00000488087 LILRA1O75019 489 aa7.33□□□□□ -1.24
ECHDC1-217ENST00000488087 TIMP2P16035 220 aa7.33□□□□□ -1.24
ECHDC1-217ENST00000488087 CBLBQ13191 982 aa7.33□□□□□ -1.24
ECHDC1-217ENST00000488087 ZNF594Q96JF6 807 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-217ENST00000488087 KLF16Q9BXK1 252 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-217ENST00000488087 CAPN5O15484 640 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 WIPF1O43516 503 aa7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 CYP2U1Q7Z449 544 aa7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 OSBPL3Q9H4L5 887 aa7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 RBM19Q9Y4C8 960 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-217ENST00000488087 FAM196BA6NMK8 535 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L15C9J2P7 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L10C9JJH3 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L13C9JLJ4 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L12C9JPN9 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L11C9JVI0 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L21D6R901 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L18D6R9N7 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L22D6RA61 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L17D6RBQ6 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L19D6RCP7 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L20D6RJB6 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 ADH1AP07327 375 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 SRPK2P78362 688 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 CLDN10P78369 228 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 USP17L24Q0WX57 530 aa7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 CRTC2Q53ET0 693 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-217ENST00000488087 ATG7O95352 703 aa7.3□□□□□ -1.24
ECHDC1-217ENST00000488087 RELBQ01201 579 aa7.3□□□□□ -1.24
ECHDC1-217ENST00000488087 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
ECHDC1-217ENST00000488087 LARGE2Q8N3Y3 721 aa7.3□□□□□ -1.24
ECHDC1-217ENST00000488087 TPCN2Q8NHX9 752 aa7.3□□□□□ -1.24
ECHDC1-217ENST00000488087 PCDHGA11Q9Y5H2 935 aa7.3□□□□□ -1.24
ECHDC1-217ENST00000488087 C11orf95C9JLR9 678 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 PTK7Q13308 1070 aa7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 Q6ZVU0 165 aa7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 AGBL1Q96MI9 1066 aa7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 NOVA2Q9UNW9 492 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
ECHDC1-217ENST00000488087 AXIN1O15169 862 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 UPP2O95045 317 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 AVPP01185 164 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 DPYDQ12882 1025 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 CTC1Q2NKJ3 1217 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 ANKMY2Q8IV38 441 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 CRIPAKQ8N1N5 446 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 MEIOBQ8N635 442 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 FAM200AQ8TCP9 573 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 ARHGEF10LQ9HCE6 1279 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 RAB6BQ9NRW1 208 aa7.28□□□□□ -1.24
ECHDC1-217ENST00000488087 ZBTB7BO15156 539 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 GNRH1P01148 92 aa7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 GDF10P55107 478 aa7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 NFX1Q12986 1120 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 SIX5Q8N196 739 aa7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-217ENST00000488087 MEN1O00255 615 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 PTGIRP43119 386 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 SEC13P55735 322 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 ELOAQ14241 798 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 ESCO1Q5FWF5 840 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 HOMEZQ8IX15 550 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 RETREG2Q8NC44 543 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 ARXQ96QS3 562 aa7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 ZNF395Q9H8N7 513 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 GMPR2Q9P2T1 348 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-217ENST00000488087 SFI1A8K8P3 1242 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 BMP2P12643 396 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 BMP1P13497 986 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms