RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 ANKRD1Q15327 319 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 RABEP1Q15276 862 aa18.02■□□□□ 0.48
PKD1-220ENST00000487932 DDX11Q96FC9 970 aa18.02■□□□□ 0.48
PKD1-220ENST00000487932 TNNT1P13805 278 aa18.02■□□□□ 0.48
PKD1-220ENST00000487932 METTL24Q5JXM2 366 aa18.02■□□□□ 0.48
PKD1-220ENST00000487932 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.47
PKD1-220ENST00000487932 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.47
PKD1-220ENST00000487932 CTNNBL1Q8WYA6 563 aaPredicted RBP18.02■□□□□ 0.47
PKD1-220ENST00000487932 DNAI2Q9GZS0 605 aa18.02■□□□□ 0.47
PKD1-220ENST00000487932 ZNF644Q9H582 1327 aaPredicted RBP18.01■□□□□ 0.47
PKD1-220ENST00000487932 CCDC192P0DO97 292 aa18.01■□□□□ 0.47
PKD1-220ENST00000487932 JAKMIP1Q96N16 626 aaKnown RBP18.01■□□□□ 0.47
PKD1-220ENST00000487932 IL1RAPL2Q9NP60 686 aa18.01■□□□□ 0.47
PKD1-220ENST00000487932 CDKL5O76039 1030 aa18.01■□□□□ 0.47
PKD1-220ENST00000487932 PDRG1Q9NUG6 133 aa18.01■□□□□ 0.47
PKD1-220ENST00000487932 ECM2O94769 699 aaPredicted RBP18.01■□□□□ 0.47
PKD1-220ENST00000487932 DNA2P51530 1060 aa18.01■□□□□ 0.47
PKD1-220ENST00000487932 SRGAP3O43295 1099 aa18■□□□□ 0.47
PKD1-220ENST00000487932 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
PKD1-220ENST00000487932 MACROD2A1Z1Q3 448 aa18■□□□□ 0.47
PKD1-220ENST00000487932 SLC4A8Q2Y0W8 1093 aa18■□□□□ 0.47
PKD1-220ENST00000487932 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
PKD1-220ENST00000487932 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
PKD1-220ENST00000487932 GOLGA6L10A0A0M3HER8 536 aa18■□□□□ 0.47
PKD1-220ENST00000487932 MBD3O95983 291 aa18■□□□□ 0.47
PKD1-220ENST00000487932 MRE11P49959 708 aa18■□□□□ 0.47
PKD1-220ENST00000487932 SPATA32Q96LK8 384 aa18■□□□□ 0.47
PKD1-220ENST00000487932 CABP1Q9NZU7 370 aa18■□□□□ 0.47
PKD1-220ENST00000487932 CBFA2T2O43439 604 aa17.99■□□□□ 0.47
PKD1-220ENST00000487932 CCT4P50991 539 aaKnown RBP17.99■□□□□ 0.47
PKD1-220ENST00000487932 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
PKD1-220ENST00000487932 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
PKD1-220ENST00000487932 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
PKD1-220ENST00000487932 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
PKD1-220ENST00000487932 MCM2P49736 904 aa17.98■□□□□ 0.47
PKD1-220ENST00000487932 DZIP1Q86YF9 867 aaKnown RBP17.98■□□□□ 0.47
PKD1-220ENST00000487932 CCDC91Q7Z6B0 441 aa17.98■□□□□ 0.47
PKD1-220ENST00000487932 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
PKD1-220ENST00000487932 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
PKD1-220ENST00000487932 STARD3NLO95772 234 aa17.98■□□□□ 0.47
PKD1-220ENST00000487932 THEMISQ8N1K5 641 aaPredicted RBP17.98■□□□□ 0.47
PKD1-220ENST00000487932 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
PKD1-220ENST00000487932 CCDC102AQ96A19 550 aa17.97■□□□□ 0.47
PKD1-220ENST00000487932 KRT85P78386 507 aa17.97■□□□□ 0.47
PKD1-220ENST00000487932 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
PKD1-220ENST00000487932 DYDC1Q8WWB3 177 aa17.97■□□□□ 0.47
PKD1-220ENST00000487932 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
PKD1-220ENST00000487932 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
PKD1-220ENST00000487932 CETN2P41208 172 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 IMMTQ16891 758 aaKnown RBP17.96■□□□□ 0.47
PKD1-220ENST00000487932 ZNF397Q8NF99 534 aaPredicted RBP17.96■□□□□ 0.47
PKD1-220ENST00000487932 KLHL10Q6JEL2 608 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 RPGRQ92834 1020 aaKnown RBP17.96■□□□□ 0.47
PKD1-220ENST00000487932 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 CCDC150Q8NCX0 1101 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 CUL5Q93034 780 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 CTNNA3Q9UI47 895 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 FERMT2Q96AC1 680 aa17.96■□□□□ 0.47
PKD1-220ENST00000487932 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 NF2P35240 595 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 CAMK4Q16566 473 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 PUS7Q96PZ0 661 aaKnown RBP17.95■□□□□ 0.46
PKD1-220ENST00000487932 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 MAP2K1Q02750 393 aaPredicted RBP17.95■□□□□ 0.46
PKD1-220ENST00000487932 GRIPAP1Q4V328 841 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 FILIP1Q7Z7B0 1213 aa17.95■□□□□ 0.46
PKD1-220ENST00000487932 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
PKD1-220ENST00000487932 ERLIN1O75477 346 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 IQCEQ6IPM2 695 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 GSTTP1A0A1W2PQM5 241 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 UPF3BQ9BZI7 483 aaKnown RBP17.94■□□□□ 0.46
PKD1-220ENST00000487932 MPRIPQ6WCQ1 1025 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 ANKLE2Q86XL3 938 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 WASF1Q92558 559 aa17.94■□□□□ 0.46
PKD1-220ENST00000487932 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
PKD1-220ENST00000487932 TMX1Q9H3N1 280 aa17.93■□□□□ 0.46
PKD1-220ENST00000487932 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
PKD1-220ENST00000487932 SPTY2D1Q68D10 685 aaPredicted RBP17.93■□□□□ 0.46
PKD1-220ENST00000487932 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
PKD1-220ENST00000487932 TSG101Q99816 390 aa17.93■□□□□ 0.46
PKD1-220ENST00000487932 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.92■□□□□ 0.46
PKD1-220ENST00000487932 ZNF287Q9HBT7 754 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 ARHGAP5Q13017 1502 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 CACNA2D4Q7Z3S7 1137 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 FEZ1Q99689 392 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
PKD1-220ENST00000487932 CTNNA2P26232 953 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
PKD1-220ENST00000487932 CEP131Q9UPN4 1083 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 EIF3JO75822 258 aaKnown RBP17.92■□□□□ 0.46
PKD1-220ENST00000487932 CASTP20810 708 aaKnown RBP17.92■□□□□ 0.46
PKD1-220ENST00000487932 CFAP100Q494V2 611 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 LARP1Q6PKG0 1096 aaKnown RBP17.92■□□□□ 0.46
PKD1-220ENST00000487932 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 STAMBPO95630 424 aa17.92■□□□□ 0.46
PKD1-220ENST00000487932 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 PUF60Q9UHX1 559 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms