RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CNTNAP3Q9BZ76 1288 aa10.22□□□□□ -0.77
SMC4-219ENST00000487747 PCDHB11Q9Y5F2 797 aa10.22□□□□□ -0.77
SMC4-219ENST00000487747 A0A1W2PRU2 124 aa10.21□□□□□ -0.77
SMC4-219ENST00000487747 RHOQP17081 205 aa10.21□□□□□ -0.77
SMC4-219ENST00000487747 IRF5Q13568 498 aa10.21□□□□□ -0.77
SMC4-219ENST00000487747 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
SMC4-219ENST00000487747 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.77
SMC4-219ENST00000487747 MEN1O00255 615 aa10.2□□□□□ -0.78
SMC4-219ENST00000487747 RNF144AP50876 292 aaPredicted RBP10.2□□□□□ -0.78
SMC4-219ENST00000487747 RNF20Q5VTR2 975 aa10.2□□□□□ -0.78
SMC4-219ENST00000487747 LYSMD3Q7Z3D4 306 aa10.2□□□□□ -0.78
SMC4-219ENST00000487747 CDCA7Q9BWT1 371 aaPredicted RBP10.2□□□□□ -0.78
SMC4-219ENST00000487747 OSBPL3Q9H4L5 887 aa10.2□□□□□ -0.78
SMC4-219ENST00000487747 CDC14CA4D256 554 aa10.19□□□□□ -0.78
SMC4-219ENST00000487747 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
SMC4-219ENST00000487747 CCDC85AQ96PX6 553 aaPredicted RBP10.19□□□□□ -0.78
SMC4-219ENST00000487747 CEP126Q9P2H0 1117 aa10.19□□□□□ -0.78
SMC4-219ENST00000487747 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
SMC4-219ENST00000487747 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
SMC4-219ENST00000487747 FAM181BA6NEQ2 426 aa10.17□□□□□ -0.78
SMC4-219ENST00000487747 APBB1O00213 710 aa10.17□□□□□ -0.78
SMC4-219ENST00000487747 TRAK2O60296 914 aa10.17□□□□□ -0.78
SMC4-219ENST00000487747 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
SMC4-219ENST00000487747 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
SMC4-219ENST00000487747 CCDC125Q86Z20 511 aa10.15□□□□□ -0.78
SMC4-219ENST00000487747 GDPD2Q9HCC8 539 aa10.15□□□□□ -0.78
SMC4-219ENST00000487747 RAB6BQ9NRW1 208 aa10.15□□□□□ -0.78
SMC4-219ENST00000487747 VAC14Q08AM6 782 aa10.14□□□□□ -0.79
SMC4-219ENST00000487747 POU4F2Q12837 409 aa10.14□□□□□ -0.79
SMC4-219ENST00000487747 CYP2U1Q7Z449 544 aa10.14□□□□□ -0.79
SMC4-219ENST00000487747 CLN3Q13286 438 aa10.13□□□□□ -0.79
SMC4-219ENST00000487747 PHTF2Q8N3S3 785 aa10.13□□□□□ -0.79
SMC4-219ENST00000487747 GRIP2Q9C0E4 1043 aa10.13□□□□□ -0.79
SMC4-219ENST00000487747 GPC1P35052 558 aa10.12□□□□□ -0.79
SMC4-219ENST00000487747 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
SMC4-219ENST00000487747 ZNF592Q92610 1267 aa10.12□□□□□ -0.79
SMC4-219ENST00000487747 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
SMC4-219ENST00000487747 STAU1O95793 577 aaKnown RBP10.11□□□□□ -0.79
SMC4-219ENST00000487747 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
SMC4-219ENST00000487747 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
SMC4-219ENST00000487747 IL2RAP01589 272 aa10.1□□□□□ -0.79
SMC4-219ENST00000487747 ABL2P42684 1182 aa10.1□□□□□ -0.79
SMC4-219ENST00000487747 GAS6Q14393 721 aa10.1□□□□□ -0.79
SMC4-219ENST00000487747 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMC4-219ENST00000487747 MCM6Q14566 821 aa10.09□□□□□ -0.79
SMC4-219ENST00000487747 DBN1Q16643 649 aa10.09□□□□□ -0.79
SMC4-219ENST00000487747 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
SMC4-219ENST00000487747 ZNF837Q96EG3 531 aaPredicted RBP10.09□□□□□ -0.79
SMC4-219ENST00000487747 GPR25O00155 361 aa10.08□□□□□ -0.8
SMC4-219ENST00000487747 NBPF10Q6P3W6 841 aaKnown RBP10.08□□□□□ -0.8
SMC4-219ENST00000487747 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
SMC4-219ENST00000487747 NBPF15Q8N660 670 aa10.08□□□□□ -0.8
SMC4-219ENST00000487747 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
SMC4-219ENST00000487747 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
SMC4-219ENST00000487747 GNRH1P01148 92 aa10.07□□□□□ -0.8
SMC4-219ENST00000487747 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
SMC4-219ENST00000487747 CENPCQ03188 943 aa10.07□□□□□ -0.8
SMC4-219ENST00000487747 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
SMC4-219ENST00000487747 ESYT1Q9BSJ8 1104 aa10.07□□□□□ -0.8
SMC4-219ENST00000487747 PRM3Q9NNZ6 103 aa10.07□□□□□ -0.8
SMC4-219ENST00000487747 HRH3Q9Y5N1 445 aa10.07□□□□□ -0.8
SMC4-219ENST00000487747 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
SMC4-219ENST00000487747 DYRK1BQ9Y463 629 aa10.06□□□□□ -0.8
SMC4-219ENST00000487747 SPATA31C2B4DYI2 1134 aa10.05□□□□□ -0.8
SMC4-219ENST00000487747 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
SMC4-219ENST00000487747 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
SMC4-219ENST00000487747 RNF135Q8IUD6 432 aa10.05□□□□□ -0.8
SMC4-219ENST00000487747 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
SMC4-219ENST00000487747 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
SMC4-219ENST00000487747 ADAMTS2O95450 1211 aa10.04□□□□□ -0.8
SMC4-219ENST00000487747 GSK3AP49840 483 aa10.04□□□□□ -0.8
SMC4-219ENST00000487747 XAGE2Q96GT9 111 aa10.04□□□□□ -0.8
SMC4-219ENST00000487747 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
SMC4-219ENST00000487747 WASLO00401 505 aaPredicted RBP10.03□□□□□ -0.8
SMC4-219ENST00000487747 PHKA2P46019 1235 aa10.03□□□□□ -0.8
SMC4-219ENST00000487747 OXLD1Q5BKU9 147 aa10.03□□□□□ -0.8
SMC4-219ENST00000487747 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
SMC4-219ENST00000487747 SVOPQ8N4V2 548 aa10.03□□□□□ -0.8
SMC4-219ENST00000487747 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
SMC4-219ENST00000487747 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
SMC4-219ENST00000487747 COG6Q9Y2V7 657 aa10.03□□□□□ -0.8
SMC4-219ENST00000487747 THBS1P07996 1170 aa10.02□□□□□ -0.81
SMC4-219ENST00000487747 SUZ12Q15022 739 aaKnown RBP10.02□□□□□ -0.81
SMC4-219ENST00000487747 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
SMC4-219ENST00000487747 ETNK1Q9HBU6 452 aa10.02□□□□□ -0.81
SMC4-219ENST00000487747 TIMMDC1Q9NPL8 285 aa10.02□□□□□ -0.81
SMC4-219ENST00000487747 ARHGEF15O94989 841 aa10.01□□□□□ -0.81
SMC4-219ENST00000487747 USP4Q13107 963 aa10.01□□□□□ -0.81
SMC4-219ENST00000487747 POM121Q96HA1 1249 aa10.01□□□□□ -0.81
SMC4-219ENST00000487747 WDR44Q5JSH3 913 aa10□□□□□ -0.81
SMC4-219ENST00000487747 ZSCAN10Q96SZ4 725 aaPredicted RBP10□□□□□ -0.81
SMC4-219ENST00000487747 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
SMC4-219ENST00000487747 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
SMC4-219ENST00000487747 WASHC4Q2M389 1173 aa9.99□□□□□ -0.81
SMC4-219ENST00000487747 GPAMQ9HCL2 828 aa9.99□□□□□ -0.81
SMC4-219ENST00000487747 F11P03951 625 aa9.98□□□□□ -0.81
SMC4-219ENST00000487747 SCNN1DP51172 638 aa9.98□□□□□ -0.81
SMC4-219ENST00000487747 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
SMC4-219ENST00000487747 C4orf17Q53FE4 359 aa9.98□□□□□ -0.81
SMC4-219ENST00000487747 PLPP7Q8NBV4 271 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms