RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ATP13A2Q9NQ11 1180 aa8.43□□□□□ -1.06
R3HDM1-218ENST00000487294 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
R3HDM1-218ENST00000487294 WNT7BP56706 349 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 DESI1Q6ICB0 168 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 CCDC24Q8N4L8 307 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 CLIP1P30622 1438 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 ARHGAP5Q13017 1502 aa8.42□□□□□ -1.06
R3HDM1-218ENST00000487294 CDC42BPBQ9Y5S2 1711 aa8.41□□□□□ -1.06
R3HDM1-218ENST00000487294 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
R3HDM1-218ENST00000487294 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
R3HDM1-218ENST00000487294 NFX1Q12986 1120 aaKnown RBP8.41□□□□□ -1.06
R3HDM1-218ENST00000487294 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
R3HDM1-218ENST00000487294 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
R3HDM1-218ENST00000487294 C3P01024 1663 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 ABCA6Q8N139 1617 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 ABCC1P33527 1531 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 NUTM2BA6NNL0 878 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 NUTM2EB1AL46 878 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 J3QL48 77 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 WIPF1O43516 503 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 NUTM2AQ8IVF1 878 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
R3HDM1-218ENST00000487294 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.07
R3HDM1-218ENST00000487294 LTBP4Q8N2S1 1624 aa8.4□□□□□ -1.07
R3HDM1-218ENST00000487294 CCDC18Q5T9S5 1454 aa8.39□□□□□ -1.07
R3HDM1-218ENST00000487294 NPATQ14207 1427 aa8.39□□□□□ -1.07
R3HDM1-218ENST00000487294 PTPRNQ16849 979 aa8.39□□□□□ -1.07
R3HDM1-218ENST00000487294 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
R3HDM1-218ENST00000487294 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
R3HDM1-218ENST00000487294 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
R3HDM1-218ENST00000487294 NCOA1Q15788 1441 aa8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 CASKIN1Q8WXD9 1431 aa8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 KIDINS220Q9ULH0 1771 aa8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 RC3H1Q5TC82 1133 aaKnown RBP8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
R3HDM1-218ENST00000487294 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 ITSN2Q9NZM3 1697 aa8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 SOCS7O14512 581 aa8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 SKOR1P84550 965 aa8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 INSM1Q01101 510 aaPredicted RBP8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 HPS1Q92902 700 aa8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
R3HDM1-218ENST00000487294 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-218ENST00000487294 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-218ENST00000487294 TSC1Q92574 1164 aa8.36□□□□□ -1.07
R3HDM1-218ENST00000487294 KIAA1107Q9UPP5 1409 aa8.36□□□□□ -1.07
R3HDM1-218ENST00000487294 SAMD9LQ8IVG5 1584 aa8.35□□□□□ -1.07
R3HDM1-218ENST00000487294 CDC42BPAQ5VT25 1732 aa8.35□□□□□ -1.07
R3HDM1-218ENST00000487294 ILDR2Q71H61 639 aa8.35□□□□□ -1.07
R3HDM1-218ENST00000487294 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
R3HDM1-218ENST00000487294 ATP1B4Q9UN42 357 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-218ENST00000487294 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
R3HDM1-218ENST00000487294 PLA2R1Q13018 1463 aa8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 FYCO1Q9BQS8 1478 aa8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 TERTO14746 1132 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 PLXNC1O60486 1568 aa8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 ZMYM3Q14202 1370 aa8.34□□□□□ -1.07
R3HDM1-218ENST00000487294 GPATCH8Q9UKJ3 1502 aaKnown RBP8.34□□□□□ -1.08
R3HDM1-218ENST00000487294 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
R3HDM1-218ENST00000487294 UNC93B1Q9H1C4 597 aa8.33□□□□□ -1.08
R3HDM1-218ENST00000487294 TCOF1Q13428 1488 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 PLEKHH2Q8IVE3 1493 aa8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 ZNF142P52746 1687 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 CAMSAP1Q5T5Y3 1602 aa8.32□□□□□ -1.08
R3HDM1-218ENST00000487294 SPATA31D1Q6ZQQ2 1576 aa8.31□□□□□ -1.08
R3HDM1-218ENST00000487294 INO80Q9ULG1 1556 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-218ENST00000487294 PTPRKQ15262 1439 aa8.31□□□□□ -1.08
R3HDM1-218ENST00000487294 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-218ENST00000487294 PCMTD1Q96MG8 357 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-218ENST00000487294 SPAG9O60271 1321 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 ATP7AQ04656 1500 aa8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 SYCP2Q9BX26 1530 aa8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 CTHP32929 405 aa8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 BAP1Q92560 729 aa8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 A2MP01023 1474 aa8.3□□□□□ -1.08
R3HDM1-218ENST00000487294 SIAH2O43255 324 aa8.29□□□□□ -1.08
R3HDM1-218ENST00000487294 SH3BP2P78314 561 aa8.29□□□□□ -1.08
R3HDM1-218ENST00000487294 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
R3HDM1-218ENST00000487294 CEP170BQ9Y4F5 1589 aaPredicted RBP8.29□□□□□ -1.08
R3HDM1-218ENST00000487294 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
R3HDM1-218ENST00000487294 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
R3HDM1-218ENST00000487294 RFC5P40937 340 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms