RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
CDK13-205ENST00000484589 ABCC6O95255 1503 aa11.37□□□□□ -0.59
CDK13-205ENST00000484589 RGPD1P0DJD0 1748 aa11.37□□□□□ -0.59
CDK13-205ENST00000484589 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
CDK13-205ENST00000484589 IGSF1Q8N6C5 1336 aa11.37□□□□□ -0.59
CDK13-205ENST00000484589 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
CDK13-205ENST00000484589 CRB1P82279 1406 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 CCDC146Q8IYE0 955 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 QTRT2Q9H974 415 aaKnown RBP11.35□□□□□ -0.59
CDK13-205ENST00000484589 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 WDR43Q15061 677 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDK13-205ENST00000484589 VPS72Q15906 364 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 CARD10Q9BWT7 1032 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
CDK13-205ENST00000484589 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
CDK13-205ENST00000484589 NBR1Q14596 966 aa11.34□□□□□ -0.59
CDK13-205ENST00000484589 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
CDK13-205ENST00000484589 NEFLP07196 543 aa11.33□□□□□ -0.6
CDK13-205ENST00000484589 PRKAR2BP31323 418 aa11.33□□□□□ -0.6
CDK13-205ENST00000484589 KDRP35968 1356 aa11.33□□□□□ -0.6
CDK13-205ENST00000484589 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
CDK13-205ENST00000484589 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
CDK13-205ENST00000484589 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
CDK13-205ENST00000484589 MEGF6O75095 1541 aa11.32□□□□□ -0.6
CDK13-205ENST00000484589 ATRNO75882 1429 aa11.32□□□□□ -0.6
CDK13-205ENST00000484589 NCAPD2Q15021 1401 aa11.32□□□□□ -0.6
CDK13-205ENST00000484589 TCP11L2Q8N4U5 519 aa11.32□□□□□ -0.6
CDK13-205ENST00000484589 GJD4Q96KN9 370 aaPredicted RBP11.32□□□□□ -0.6
CDK13-205ENST00000484589 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
CDK13-205ENST00000484589 TRPC5Q9UL62 973 aaPredicted RBP11.32□□□□□ -0.6
CDK13-205ENST00000484589 FCHSD2O94868 740 aa11.32□□□□□ -0.6
CDK13-205ENST00000484589 GLI3P10071 1580 aa11.31□□□□□ -0.6
CDK13-205ENST00000484589 ZNF772Q68DY9 489 aaPredicted RBP11.3□□□□□ -0.6
CDK13-205ENST00000484589 IL2RBP14784 551 aa11.3□□□□□ -0.6
CDK13-205ENST00000484589 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
CDK13-205ENST00000484589 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
CDK13-205ENST00000484589 APAF1O14727 1248 aa11.29□□□□□ -0.6
CDK13-205ENST00000484589 MTHFSDQ2M296 383 aaKnown RBP11.29□□□□□ -0.6
CDK13-205ENST00000484589 DISP2A7MBM2 1401 aa11.28□□□□□ -0.6
CDK13-205ENST00000484589 NEUROD2Q15784 382 aa11.28□□□□□ -0.6
CDK13-205ENST00000484589 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
CDK13-205ENST00000484589 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
CDK13-205ENST00000484589 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.6
CDK13-205ENST00000484589 RUNDC1Q96C34 613 aa11.27□□□□□ -0.6
CDK13-205ENST00000484589 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.6
CDK13-205ENST00000484589 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.61
CDK13-205ENST00000484589 A0A0G2JS52 829 aa11.27□□□□□ -0.61
CDK13-205ENST00000484589 CYP27B1O15528 508 aa11.27□□□□□ -0.61
CDK13-205ENST00000484589 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
CDK13-205ENST00000484589 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
CDK13-205ENST00000484589 RBM6P78332 1123 aaKnown RBP11.26□□□□□ -0.61
CDK13-205ENST00000484589 DDX54Q8TDD1 881 aaKnown RBP11.26□□□□□ -0.61
CDK13-205ENST00000484589 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
CDK13-205ENST00000484589 RXRBP28702 533 aa11.26□□□□□ -0.61
CDK13-205ENST00000484589 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
CDK13-205ENST00000484589 ZCRB1Q8TBF4 217 aaKnown RBP11.26□□□□□ -0.61
CDK13-205ENST00000484589 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
CDK13-205ENST00000484589 TMPOP42166 694 aaKnown RBP11.25□□□□□ -0.61
CDK13-205ENST00000484589 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
CDK13-205ENST00000484589 MAPK8IP3Q9UPT6 1336 aa11.25□□□□□ -0.61
CDK13-205ENST00000484589 SHANK3Q9BYB0 1731 aa11.25□□□□□ -0.61
CDK13-205ENST00000484589 EXOC5O00471 708 aa11.24□□□□□ -0.61
CDK13-205ENST00000484589 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
CDK13-205ENST00000484589 DDB1Q16531 1140 aa11.24□□□□□ -0.61
CDK13-205ENST00000484589 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
CDK13-205ENST00000484589 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
CDK13-205ENST00000484589 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
CDK13-205ENST00000484589 MARCH10Q8NA82 808 aaPredicted RBP11.24□□□□□ -0.61
CDK13-205ENST00000484589 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
CDK13-205ENST00000484589 PARP4Q9UKK3 1724 aaKnown RBP11.24□□□□□ -0.61
CDK13-205ENST00000484589 LRRC37A3O60309 1634 aa11.24□□□□□ -0.61
CDK13-205ENST00000484589 THSD7AQ9UPZ6 1657 aa11.24□□□□□ -0.61
CDK13-205ENST00000484589 RIPK4P57078 832 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 LGR6Q9HBX8 967 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 PHKG2P15735 406 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 MCM10Q7L590 875 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 PNNQ9H307 717 aaKnown RBP11.23□□□□□ -0.61
CDK13-205ENST00000484589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■□□□ 12.5
CDK13-205ENST00000484589 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 SPG7Q9UQ90 795 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
CDK13-205ENST00000484589 HNRNPUQ00839 825 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK13-205ENST00000484589 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
CDK13-205ENST00000484589 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
CDK13-205ENST00000484589 RGS12O14924 1447 aa11.21□□□□□ -0.61
CDK13-205ENST00000484589 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
CDK13-205ENST00000484589 NEFMP07197 916 aa11.21□□□□□ -0.61
CDK13-205ENST00000484589 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
CDK13-205ENST00000484589 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.62
CDK13-205ENST00000484589 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.62
CDK13-205ENST00000484589 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.62
CDK13-205ENST00000484589 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
CDK13-205ENST00000484589 PDE3BQ13370 1112 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms