RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 TATP17735 454 aaPredicted RBP36.07■■■■□ 3.36
SMDT1-203ENST00000484235 ZCRB1Q8TBF4 217 aaKnown RBP36.07■■■■□ 3.36
SMDT1-203ENST00000484235 PARD3Q8TEW0 1356 aa36.06■■■■□ 3.36
SMDT1-203ENST00000484235 BCL9O00512 1426 aa36.06■■■■□ 3.36
SMDT1-203ENST00000484235 MEGF6O75095 1541 aa36.05■■■■□ 3.36
SMDT1-203ENST00000484235 NCAPD2Q15021 1401 aa36.05■■■■□ 3.36
SMDT1-203ENST00000484235 DDX54Q8TDD1 881 aaKnown RBP36.03■■■■□ 3.36
SMDT1-203ENST00000484235 IL13P35225 146 aa36.01■■■■□ 3.36
SMDT1-203ENST00000484235 IGSF1Q8N6C5 1336 aa36.01■■■■□ 3.35
SMDT1-203ENST00000484235 BCL11BQ9C0K0 894 aaPredicted RBP35.97■■■■□ 3.35
SMDT1-203ENST00000484235 DIAPH1O60610 1272 aaKnown RBP35.95■■■■□ 3.35
SMDT1-203ENST00000484235 PPP2R1AP30153 589 aa35.95■■■■□ 3.35
SMDT1-203ENST00000484235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.94■■■■□ 3.34
SMDT1-203ENST00000484235 RREB1Q92766 1687 aa35.93■■■■□ 3.34
SMDT1-203ENST00000484235 SPG7Q9UQ90 795 aa35.92■■■■□ 3.34
SMDT1-203ENST00000484235 PCDH11XQ9BZA7 1347 aa35.91■■■■□ 3.34
SMDT1-203ENST00000484235 PCDH11YQ9BZA8 1340 aa35.91■■■■□ 3.34
SMDT1-203ENST00000484235 ZNF316A6NFI3 1004 aaPredicted RBP35.91■■■■□ 3.34
SMDT1-203ENST00000484235 CFAP53Q96M91 514 aa35.9■■■■□ 3.34
SMDT1-203ENST00000484235 PLEKHG2Q9H7P9 1386 aa35.89■■■■□ 3.34
SMDT1-203ENST00000484235 SULT6B1Q6IMI4 303 aa35.89■■■■□ 3.34
SMDT1-203ENST00000484235 PTF1AQ7RTS3 328 aa35.89■■■■□ 3.34
SMDT1-203ENST00000484235 ACSBG1Q96GR2 724 aa35.88■■■■□ 3.33
SMDT1-203ENST00000484235 NUP188Q5SRE5 1749 aa35.88■■■■□ 3.33
SMDT1-203ENST00000484235 KCNQ2O43526 872 aa35.87■■■■□ 3.33
SMDT1-203ENST00000484235 AEBP1Q8IUX7 1158 aa35.87■■■■□ 3.33
SMDT1-203ENST00000484235 CYP27B1O15528 508 aa35.86■■■■□ 3.33
SMDT1-203ENST00000484235 RALBP1Q15311 655 aa35.85■■■■□ 3.33
SMDT1-203ENST00000484235 KDRP35968 1356 aa35.85■■■■□ 3.33
SMDT1-203ENST00000484235 SBF2Q86WG5 1849 aa35.85■■■■□ 3.33
SMDT1-203ENST00000484235 PLSCR1O15162 318 aa35.83■■■■□ 3.33
SMDT1-203ENST00000484235 NBPF14Q5TI25 921 aa35.83■■■■□ 3.33
SMDT1-203ENST00000484235 COL3A1P02461 1466 aaPredicted RBP35.83■■■■□ 3.33
SMDT1-203ENST00000484235 PLEKHO1Q53GL0 409 aaPredicted RBP35.82■■■■□ 3.32
SMDT1-203ENST00000484235 SHANK3Q9BYB0 1731 aa35.82■■■■□ 3.32
SMDT1-203ENST00000484235 AMOTQ4VCS5 1084 aa35.81■■■■□ 3.32
SMDT1-203ENST00000484235 PRIM1P49642 420 aaKnown RBP35.79■■■■□ 3.32
SMDT1-203ENST00000484235 NKX1-1Q15270 411 aaPredicted RBP35.79■■■■□ 3.32
SMDT1-203ENST00000484235 PKD1L3Q7Z443 1732 aa35.78■■■■□ 3.32
SMDT1-203ENST00000484235 U2SURPO15042 1029 aaKnown RBP35.78■■■■□ 3.32
SMDT1-203ENST00000484235 HMOX1P09601 288 aa35.78■■■■□ 3.32
SMDT1-203ENST00000484235 IFNL2Q8IZJ0 200 aa35.78■■■■□ 3.32
SMDT1-203ENST00000484235 NUDCQ9Y266 331 aa35.77■■■■□ 3.32
SMDT1-203ENST00000484235 PHKG2P15735 406 aa35.76■■■■□ 3.32
SMDT1-203ENST00000484235 SYTL4Q96C24 671 aaPredicted RBP35.76■■■■□ 3.32
SMDT1-203ENST00000484235 NHSQ6T4R5 1651 aa35.75■■■■□ 3.31
SMDT1-203ENST00000484235 PROM2Q8N271 834 aa35.71■■■■□ 3.31
SMDT1-203ENST00000484235 ZNF530Q6P9A1 599 aaPredicted RBP35.7■■■■□ 3.31
SMDT1-203ENST00000484235 RGPD3A6NKT7 1758 aaPredicted RBP35.69■■■■□ 3.3
SMDT1-203ENST00000484235 RGPD4Q7Z3J3 1758 aa35.69■■■■□ 3.3
SMDT1-203ENST00000484235 HSP90AB1P08238 724 aaKnown RBP35.68■■■■□ 3.3
SMDT1-203ENST00000484235 SPON1Q9HCB6 807 aa35.67■■■■□ 3.3
SMDT1-203ENST00000484235 ANO8Q9HCE9 1232 aaPredicted RBP35.67■■■■□ 3.3
SMDT1-203ENST00000484235 KAT6BQ8WYB5 2073 aa35.67■■■■□ 3.3
SMDT1-203ENST00000484235 MYBBP1AQ9BQG0 1328 aaKnown RBP35.66■■■■□ 3.3
SMDT1-203ENST00000484235 C1orf141Q5JVX7 400 aa35.66■■■■□ 3.3
SMDT1-203ENST00000484235 U2AF1L5P0DN76 240 aaPredicted RBP35.65■■■■□ 3.3
SMDT1-203ENST00000484235 U2AF1Q01081 240 aaKnown RBP eCLIP35.65■■■■□ 3.3
SMDT1-203ENST00000484235 DCAF5Q96JK2 942 aa35.65■■■■□ 3.3
SMDT1-203ENST00000484235 PRKRIP1Q9H875 184 aaPredicted RBP35.65■■■■□ 3.3
SMDT1-203ENST00000484235 TXNRD1Q16881 649 aa35.64■■■■□ 3.3
SMDT1-203ENST00000484235 MPRIPQ6WCQ1 1025 aa35.64■■■■□ 3.3
SMDT1-203ENST00000484235 DOT1LQ8TEK3 1739 aa35.63■■■■□ 3.29
SMDT1-203ENST00000484235 BTAF1O14981 1849 aa35.61■■■■□ 3.29
SMDT1-203ENST00000484235 FCHSD2O94868 740 aa35.6■■■■□ 3.29
SMDT1-203ENST00000484235 RSPH6AQ9H0K4 717 aa35.6■■■■□ 3.29
SMDT1-203ENST00000484235 ERVV-2B6SEH9 535 aa35.59■■■■□ 3.29
SMDT1-203ENST00000484235 MTHFSDQ2M296 383 aaKnown RBP35.59■■■■□ 3.29
SMDT1-203ENST00000484235 AKAP4Q5JQC9 854 aa35.59■■■■□ 3.29
SMDT1-203ENST00000484235 PIGBQ92521 554 aa35.58■■■■□ 3.29
SMDT1-203ENST00000484235 PDGFDQ9GZP0 370 aaPredicted RBP35.58■■■■□ 3.29
SMDT1-203ENST00000484235 TMOD3Q9NYL9 352 aa35.57■■■■□ 3.28
SMDT1-203ENST00000484235 PRKAR2BP31323 418 aa35.56■■■■□ 3.28
SMDT1-203ENST00000484235 SLC27A3Q5K4L6 730 aa35.54■■■■□ 3.28
SMDT1-203ENST00000484235 CASZ1Q86V15 1759 aa35.53■■■■□ 3.28
SMDT1-203ENST00000484235 GAS2L2Q8NHY3 880 aa35.53■■■■□ 3.28
SMDT1-203ENST00000484235 PHACTR3Q96KR7 559 aa35.53■■■■□ 3.28
SMDT1-203ENST00000484235 TOGARAM1Q9Y4F4 1720 aa35.53■■■■□ 3.28
SMDT1-203ENST00000484235 SMARCC1Q92922 1105 aaPredicted RBP35.52■■■■□ 3.28
SMDT1-203ENST00000484235 PPP1R1BQ9UD71 204 aaPredicted RBP35.52■■■■□ 3.28
SMDT1-203ENST00000484235 KDM6AO15550 1401 aaPredicted RBP35.51■■■■□ 3.28
SMDT1-203ENST00000484235 CABP4P57796 275 aa35.5■■■■□ 3.27
SMDT1-203ENST00000484235 LRRC4BQ9NT99 713 aa35.49■■■■□ 3.27
SMDT1-203ENST00000484235 ITGB4P16144 1822 aa35.46■■■■□ 3.27
SMDT1-203ENST00000484235 PNNQ9H307 717 aaKnown RBP35.46■■■■□ 3.27
SMDT1-203ENST00000484235 LGR6Q9HBX8 967 aa35.46■■■■□ 3.27
SMDT1-203ENST00000484235 PALLDQ8WX93 1383 aa35.46■■■■□ 3.27
SMDT1-203ENST00000484235 PTGER2P43116 358 aa35.45■■■■□ 3.27
SMDT1-203ENST00000484235 NFATC2IPQ8NCF5 419 aa35.45■■■■□ 3.27
SMDT1-203ENST00000484235 CCNL1Q9UK58 526 aaPredicted RBP35.45■■■■□ 3.27
SMDT1-203ENST00000484235 ASAP1Q9ULH1 1129 aa35.45■■■■□ 3.27
SMDT1-203ENST00000484235 GNAT3A8MTJ3 354 aa35.44■■■■□ 3.26
SMDT1-203ENST00000484235 RNMTO43148 476 aaKnown RBP35.44■■■■□ 3.26
SMDT1-203ENST00000484235 SLC15A2Q16348 729 aa35.44■■■■□ 3.26
SMDT1-203ENST00000484235 ZBTB7AO95365 584 aa35.43■■■■□ 3.26
SMDT1-203ENST00000484235 STK32BQ9NY57 414 aa35.43■■■■□ 3.26
SMDT1-203ENST00000484235 NEFMP07197 916 aa35.42■■■■□ 3.26
SMDT1-203ENST00000484235 ATG3Q9NT62 314 aa35.42■■■■□ 3.26
SMDT1-203ENST00000484235 MAP3K5Q99683 1374 aa35.41■■■■□ 3.26
SMDT1-203ENST00000484235 YY1P25490 414 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms