RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 CHRNA2Q15822 529 aa21.53■■□□□ 1.04
UBE2E1-209ENST00000484048 UTRNP46939 3433 aa21.53■■□□□ 1.04
UBE2E1-209ENST00000484048 EIF4A2Q14240 407 aaKnown RBP21.52■■□□□ 1.04
UBE2E1-209ENST00000484048 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
UBE2E1-209ENST00000484048 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
UBE2E1-209ENST00000484048 ADAMTS8Q9UP79 889 aa21.51■■□□□ 1.03
UBE2E1-209ENST00000484048 ZBTB7AO95365 584 aa21.5■■□□□ 1.03
UBE2E1-209ENST00000484048 PTGER2P43116 358 aa21.5■■□□□ 1.03
UBE2E1-209ENST00000484048 AXIN2Q9Y2T1 843 aa21.49■■□□□ 1.03
UBE2E1-209ENST00000484048 RGPD3A6NKT7 1758 aaPredicted RBP21.48■■□□□ 1.03
UBE2E1-209ENST00000484048 RGPD4Q7Z3J3 1758 aa21.48■■□□□ 1.03
UBE2E1-209ENST00000484048 PDGFDQ9GZP0 370 aaPredicted RBP21.48■■□□□ 1.03
UBE2E1-209ENST00000484048 U2SURPO15042 1029 aaKnown RBP21.47■■□□□ 1.03
UBE2E1-209ENST00000484048 EVA1CP58658 441 aa21.47■■□□□ 1.03
UBE2E1-209ENST00000484048 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
UBE2E1-209ENST00000484048 SYT17Q9BSW7 474 aa21.47■■□□□ 1.03
UBE2E1-209ENST00000484048 FHDC1Q9C0D6 1143 aaPredicted RBP21.47■■□□□ 1.03
UBE2E1-209ENST00000484048 PLSCR1O15162 318 aa21.46■■□□□ 1.03
UBE2E1-209ENST00000484048 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
UBE2E1-209ENST00000484048 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
UBE2E1-209ENST00000484048 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
UBE2E1-209ENST00000484048 ERBB3P21860 1342 aa21.45■■□□□ 1.02
UBE2E1-209ENST00000484048 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
UBE2E1-209ENST00000484048 COL5A2P05997 1499 aaPredicted RBP21.45■■□□□ 1.02
UBE2E1-209ENST00000484048 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
UBE2E1-209ENST00000484048 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
UBE2E1-209ENST00000484048 LTV1Q96GA3 475 aaPredicted RBP21.44■■□□□ 1.02
UBE2E1-209ENST00000484048 ATF5Q9Y2D1 282 aaPredicted RBP21.44■■□□□ 1.02
UBE2E1-209ENST00000484048 IGSF1Q8N6C5 1336 aa21.44■■□□□ 1.02
UBE2E1-209ENST00000484048 OVOS2A0A0G2JMS6 1433 aa21.44■■□□□ 1.02
UBE2E1-209ENST00000484048 EYA1Q99502 592 aa21.43■■□□□ 1.02
UBE2E1-209ENST00000484048 BCL11BQ9C0K0 894 aaPredicted RBP21.43■■□□□ 1.02
UBE2E1-209ENST00000484048 NCAPD2Q15021 1401 aa21.43■■□□□ 1.02
UBE2E1-209ENST00000484048 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
UBE2E1-209ENST00000484048 KDRP35968 1356 aa21.41■■□□□ 1.02
UBE2E1-209ENST00000484048 FCHSD2O94868 740 aa21.41■■□□□ 1.02
UBE2E1-209ENST00000484048 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
UBE2E1-209ENST00000484048 HMOX1P09601 288 aa21.4■■□□□ 1.02
UBE2E1-209ENST00000484048 PARP4Q9UKK3 1724 aaKnown RBP21.4■■□□□ 1.02
UBE2E1-209ENST00000484048 CHD4Q14839 1912 aa21.39■■□□□ 1.02
UBE2E1-209ENST00000484048 WNK3Q9BYP7 1800 aa21.39■■□□□ 1.02
UBE2E1-209ENST00000484048 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
UBE2E1-209ENST00000484048 NBPF6Q5VWK0 638 aa21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 SULT6B1Q6IMI4 303 aa21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 CCDC146Q8IYE0 955 aa21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 NBPF4Q96M43 638 aa21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
UBE2E1-209ENST00000484048 WDR17Q8IZU2 1322 aa21.37■■□□□ 1.01
UBE2E1-209ENST00000484048 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
UBE2E1-209ENST00000484048 AEBP1Q8IUX7 1158 aa21.37■■□□□ 1.01
UBE2E1-209ENST00000484048 MTFR1LQ9H019 292 aa21.37■■□□□ 1.01
UBE2E1-209ENST00000484048 STK32BQ9NY57 414 aa21.36■■□□□ 1.01
UBE2E1-209ENST00000484048 CEP350Q5VT06 3117 aa21.35■■□□□ 1.01
UBE2E1-209ENST00000484048 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
UBE2E1-209ENST00000484048 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
UBE2E1-209ENST00000484048 PROM2Q8N271 834 aa21.35■■□□□ 1.01
UBE2E1-209ENST00000484048 SGIP1Q9BQI5 828 aa21.35■■□□□ 1.01
UBE2E1-209ENST00000484048 CSB-PGBD3P0DP91 1061 aa21.34■■□□□ 1.01
UBE2E1-209ENST00000484048 USHBP1Q8N6Y0 703 aa21.34■■□□□ 1.01
UBE2E1-209ENST00000484048 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
UBE2E1-209ENST00000484048 PTF1AQ7RTS3 328 aa21.33■■□□□ 1.01
UBE2E1-209ENST00000484048 PKD1L3Q7Z443 1732 aa21.32■■□□□ 1
UBE2E1-209ENST00000484048 CRB1P82279 1406 aa21.32■■□□□ 1
UBE2E1-209ENST00000484048 SLC15A2Q16348 729 aa21.32■■□□□ 1
UBE2E1-209ENST00000484048 ARXQ96QS3 562 aa21.32■■□□□ 1
UBE2E1-209ENST00000484048 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
UBE2E1-209ENST00000484048 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
UBE2E1-209ENST00000484048 LRRC37A3O60309 1634 aa21.31■■□□□ 1
UBE2E1-209ENST00000484048 APAF1O14727 1248 aa21.31■■□□□ 1
UBE2E1-209ENST00000484048 GPR162Q16538 588 aa21.31■■□□□ 1
UBE2E1-209ENST00000484048 TOM1L2Q6ZVM7 507 aa21.3■■□□□ 1
UBE2E1-209ENST00000484048 NEFMP07197 916 aa21.29■■□□□ 1
UBE2E1-209ENST00000484048 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
UBE2E1-209ENST00000484048 CARD10Q9BWT7 1032 aa21.29■■□□□ 1
UBE2E1-209ENST00000484048 SBF2Q86WG5 1849 aa21.28■■□□□ 1
UBE2E1-209ENST00000484048 DDB1Q16531 1140 aa21.28■■□□□ 1
UBE2E1-209ENST00000484048 TXNRD1Q16881 649 aa21.28■■□□□ 1
UBE2E1-209ENST00000484048 SHANK3Q9BYB0 1731 aa21.28■■□□□ 1
UBE2E1-209ENST00000484048 ZBED9Q6R2W3 1325 aa21.28■■□□□ 1
UBE2E1-209ENST00000484048 PLEKHG2Q9H7P9 1386 aa21.27■■□□□ 1
UBE2E1-209ENST00000484048 NGEFQ8N5V2 710 aa21.27■■□□□ 1
UBE2E1-209ENST00000484048 MEGF6O75095 1541 aa21.27■■□□□ 1
UBE2E1-209ENST00000484048 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
UBE2E1-209ENST00000484048 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
UBE2E1-209ENST00000484048 BCL9O00512 1426 aa21.26■□□□□ 0.99
UBE2E1-209ENST00000484048 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
UBE2E1-209ENST00000484048 RRP7AQ9Y3A4 280 aaKnown RBP21.23■□□□□ 0.99
UBE2E1-209ENST00000484048 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
UBE2E1-209ENST00000484048 RAPGEF4Q8WZA2 1011 aa21.22■□□□□ 0.99
UBE2E1-209ENST00000484048 SALL2Q9Y467 1007 aaPredicted RBP21.22■□□□□ 0.99
UBE2E1-209ENST00000484048 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
UBE2E1-209ENST00000484048 TATP17735 454 aaPredicted RBP21.21■□□□□ 0.99
UBE2E1-209ENST00000484048 CCDC27Q2M243 656 aa21.21■□□□□ 0.99
UBE2E1-209ENST00000484048 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
UBE2E1-209ENST00000484048 GAS2L2Q8NHY3 880 aa21.21■□□□□ 0.99
UBE2E1-209ENST00000484048 ZNF521Q96K83 1311 aa21.21■□□□□ 0.99
UBE2E1-209ENST00000484048 RIPK4P57078 832 aa21.2■□□□□ 0.98
UBE2E1-209ENST00000484048 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms