RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
POLR2F-209ENST00000483713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
POLR2F-209ENST00000483713 USP35Q9P2H5 1018 aa20.96■□□□□ 0.95
POLR2F-209ENST00000483713 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
POLR2F-209ENST00000483713 PLEKHO1Q53GL0 409 aaPredicted RBP20.94■□□□□ 0.94
POLR2F-209ENST00000483713 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
POLR2F-209ENST00000483713 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
POLR2F-209ENST00000483713 GLI3P10071 1580 aa20.93■□□□□ 0.94
POLR2F-209ENST00000483713 APAF1O14727 1248 aa20.93■□□□□ 0.94
POLR2F-209ENST00000483713 NFE2L2Q16236 605 aa20.92■□□□□ 0.94
POLR2F-209ENST00000483713 GJD4Q96KN9 370 aaPredicted RBP20.92■□□□□ 0.94
POLR2F-209ENST00000483713 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
POLR2F-209ENST00000483713 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
POLR2F-209ENST00000483713 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
POLR2F-209ENST00000483713 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
POLR2F-209ENST00000483713 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
POLR2F-209ENST00000483713 MTHFSDQ2M296 383 aaKnown RBP20.9■□□□□ 0.94
POLR2F-209ENST00000483713 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
POLR2F-209ENST00000483713 DLG5Q8TDM6 1919 aa20.9■□□□□ 0.94
POLR2F-209ENST00000483713 LRRC37A3O60309 1634 aa20.89■□□□□ 0.94
POLR2F-209ENST00000483713 TNS2Q63HR2 1409 aa20.89■□□□□ 0.94
POLR2F-209ENST00000483713 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
POLR2F-209ENST00000483713 SHANK3Q9BYB0 1731 aa20.89■□□□□ 0.93
POLR2F-209ENST00000483713 PCDH11XQ9BZA7 1347 aa20.88■□□□□ 0.93
POLR2F-209ENST00000483713 PCDH11YQ9BZA8 1340 aa20.88■□□□□ 0.93
POLR2F-209ENST00000483713 ZCRB1Q8TBF4 217 aaKnown RBP20.88■□□□□ 0.93
POLR2F-209ENST00000483713 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
POLR2F-209ENST00000483713 ZNF530Q6P9A1 599 aaPredicted RBP20.87■□□□□ 0.93
POLR2F-209ENST00000483713 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
POLR2F-209ENST00000483713 RIPK4P57078 832 aa20.86■□□□□ 0.93
POLR2F-209ENST00000483713 FAM98CQ17RN3 349 aaKnown RBP20.86■□□□□ 0.93
POLR2F-209ENST00000483713 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
POLR2F-209ENST00000483713 ZBED9Q6R2W3 1325 aa20.85■□□□□ 0.93
POLR2F-209ENST00000483713 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
POLR2F-209ENST00000483713 AKAP4Q5JQC9 854 aa20.85■□□□□ 0.93
POLR2F-209ENST00000483713 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
POLR2F-209ENST00000483713 EXOC5O00471 708 aa20.84■□□□□ 0.93
POLR2F-209ENST00000483713 ONECUT3O60422 494 aaPredicted RBP20.84■□□□□ 0.93
POLR2F-209ENST00000483713 RBM6P78332 1123 aaKnown RBP20.84■□□□□ 0.93
POLR2F-209ENST00000483713 DDB1Q16531 1140 aa20.84■□□□□ 0.93
POLR2F-209ENST00000483713 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.93
POLR2F-209ENST00000483713 HSP90AB1P08238 724 aaKnown RBP20.83■□□□□ 0.93
POLR2F-209ENST00000483713 NEUROD2Q15784 382 aa20.83■□□□□ 0.93
POLR2F-209ENST00000483713 IFNL2Q8IZJ0 200 aa20.83■□□□□ 0.93
POLR2F-209ENST00000483713 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
POLR2F-209ENST00000483713 PHKG2P15735 406 aa20.82■□□□□ 0.92
POLR2F-209ENST00000483713 RTF1Q92541 710 aaKnown RBP20.82■□□□□ 0.92
POLR2F-209ENST00000483713 ADAMTS7Q9UKP4 1686 aa20.82■□□□□ 0.92
POLR2F-209ENST00000483713 RGS17Q9UGC6 210 aaPredicted RBP20.81■□□□□ 0.92
POLR2F-209ENST00000483713 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
POLR2F-209ENST00000483713 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
POLR2F-209ENST00000483713 A0A0G2JS52 829 aa20.8■□□□□ 0.92
POLR2F-209ENST00000483713 CYP27B1O15528 508 aa20.8■□□□□ 0.92
POLR2F-209ENST00000483713 MYT1Q01538 1121 aa20.8■□□□□ 0.92
POLR2F-209ENST00000483713 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
POLR2F-209ENST00000483713 WWC1Q8IX03 1113 aa20.8■□□□□ 0.92
POLR2F-209ENST00000483713 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
POLR2F-209ENST00000483713 ZNF521Q96K83 1311 aa20.79■□□□□ 0.92
POLR2F-209ENST00000483713 RXRBP28702 533 aa20.79■□□□□ 0.92
POLR2F-209ENST00000483713 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
POLR2F-209ENST00000483713 SENP3-EIF4A1A0A087X0R7 540 aa20.78■□□□□ 0.92
POLR2F-209ENST00000483713 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
POLR2F-209ENST00000483713 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.92
POLR2F-209ENST00000483713 WDR63Q8IWG1 891 aa20.77■□□□□ 0.92
POLR2F-209ENST00000483713 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
POLR2F-209ENST00000483713 DDX54Q8TDD1 881 aaKnown RBP20.77■□□□□ 0.92
POLR2F-209ENST00000483713 DCAF5Q96JK2 942 aa20.77■□□□□ 0.92
POLR2F-209ENST00000483713 KDM6AO15550 1401 aaPredicted RBP20.76■□□□□ 0.91
POLR2F-209ENST00000483713 IL16Q14005 1332 aa20.76■□□□□ 0.91
POLR2F-209ENST00000483713 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
POLR2F-209ENST00000483713 POTEAQ6S8J7 498 aa20.75■□□□□ 0.91
POLR2F-209ENST00000483713 MRC1P22897 1456 aa20.75■□□□□ 0.91
POLR2F-209ENST00000483713 RNMTO43148 476 aaKnown RBP20.74■□□□□ 0.91
POLR2F-209ENST00000483713 MCM10Q7L590 875 aa20.74■□□□□ 0.91
POLR2F-209ENST00000483713 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
POLR2F-209ENST00000483713 IL17REQ8NFR9 667 aa20.73■□□□□ 0.91
POLR2F-209ENST00000483713 BCL9O00512 1426 aa20.72■□□□□ 0.91
POLR2F-209ENST00000483713 BRWD3Q6RI45 1802 aa20.72■□□□□ 0.91
POLR2F-209ENST00000483713 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
POLR2F-209ENST00000483713 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
POLR2F-209ENST00000483713 MARCH10Q8NA82 808 aaPredicted RBP20.72■□□□□ 0.91
POLR2F-209ENST00000483713 TOGARAM1Q9Y4F4 1720 aa20.72■□□□□ 0.91
POLR2F-209ENST00000483713 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
POLR2F-209ENST00000483713 RGS12O14924 1447 aa20.71■□□□□ 0.91
POLR2F-209ENST00000483713 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
POLR2F-209ENST00000483713 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
POLR2F-209ENST00000483713 TEFQ10587 303 aa20.7■□□□□ 0.9
POLR2F-209ENST00000483713 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
POLR2F-209ENST00000483713 IFT57Q9NWB7 429 aa20.7■□□□□ 0.9
POLR2F-209ENST00000483713 DOT1LQ8TEK3 1739 aa20.7■□□□□ 0.9
POLR2F-209ENST00000483713 E9PSI1 815 aa20.69■□□□□ 0.9
POLR2F-209ENST00000483713 BABAM1Q9NWV8 329 aa20.69■□□□□ 0.9
POLR2F-209ENST00000483713 GNAI1P63096 354 aa20.68■□□□□ 0.9
POLR2F-209ENST00000483713 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
POLR2F-209ENST00000483713 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
POLR2F-209ENST00000483713 MYH16Q9H6N6 1097 aa20.68■□□□□ 0.9
POLR2F-209ENST00000483713 SLC52A2Q9HAB3 445 aa20.68■□□□□ 0.9
POLR2F-209ENST00000483713 ITGB4P16144 1822 aa20.67■□□□□ 0.9
POLR2F-209ENST00000483713 CABP4P57796 275 aa20.66■□□□□ 0.9
POLR2F-209ENST00000483713 TAF7Q15545 349 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms