RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 DNAJC2Q99543 621 aaKnown RBP13.69□□□□□ -0.22
SMPD4-218ENST00000482171 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
SMPD4-218ENST00000482171 MAP3K19Q56UN5 1328 aa13.69□□□□□ -0.22
SMPD4-218ENST00000482171 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-218ENST00000482171 FLIIQ13045 1269 aa13.68□□□□□ -0.22
SMPD4-218ENST00000482171 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
SMPD4-218ENST00000482171 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
SMPD4-218ENST00000482171 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
SMPD4-218ENST00000482171 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
SMPD4-218ENST00000482171 ANKRD24Q8TF21 1146 aa13.68□□□□□ -0.22
SMPD4-218ENST00000482171 KDM5CP41229 1560 aa13.68□□□□□ -0.22
SMPD4-218ENST00000482171 TSPOAP1O95153 1857 aa13.68□□□□□ -0.22
SMPD4-218ENST00000482171 RNF214Q8ND24 703 aa13.67□□□□□ -0.22
SMPD4-218ENST00000482171 TBX22Q9Y458 520 aa13.67□□□□□ -0.22
SMPD4-218ENST00000482171 EYA1Q99502 592 aa13.67□□□□□ -0.22
SMPD4-218ENST00000482171 RRP9O43818 475 aaKnown RBP13.67□□□□□ -0.22
SMPD4-218ENST00000482171 INSRP06213 1382 aa13.67□□□□□ -0.22
SMPD4-218ENST00000482171 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
SMPD4-218ENST00000482171 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
SMPD4-218ENST00000482171 FOSBP53539 338 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 CAVIN1Q6NZI2 390 aaKnown RBP13.66□□□□□ -0.22
SMPD4-218ENST00000482171 TTC21AQ8NDW8 1320 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 IL16Q14005 1332 aa13.66□□□□□ -0.22
SMPD4-218ENST00000482171 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-218ENST00000482171 TPM2P07951 284 aa13.65□□□□□ -0.22
SMPD4-218ENST00000482171 MEIS3Q99687 375 aa13.65□□□□□ -0.22
SMPD4-218ENST00000482171 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-218ENST00000482171 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
SMPD4-218ENST00000482171 PRDM15P57071 1507 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-218ENST00000482171 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 FAM184AQ8NB25 1140 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 NPC1L1Q9UHC9 1359 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 H3BQV1 296 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 VAMP4O75379 141 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 IFFO2Q5TF58 517 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 AACSQ86V21 672 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-218ENST00000482171 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 PI4KAP2A4QPH2 592 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 GOLGA6L6A8MZA4 724 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 PI4KAP1Q8N8J0 262 aa13.64□□□□□ -0.23
SMPD4-218ENST00000482171 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
SMPD4-218ENST00000482171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-218ENST00000482171 NRDCO43847 1150 aa13.63□□□□□ -0.23
SMPD4-218ENST00000482171 PHF14O94880 888 aa13.63□□□□□ -0.23
SMPD4-218ENST00000482171 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-218ENST00000482171 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
SMPD4-218ENST00000482171 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
SMPD4-218ENST00000482171 TMEM2Q9UHN6 1383 aa13.63□□□□□ -0.23
SMPD4-218ENST00000482171 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 METP08581 1390 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 MYD88Q99836 296 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 G3V3G9 751 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 IL13P35225 146 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
SMPD4-218ENST00000482171 GCP02774 474 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 NUCB2P80303 420 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 CWC27Q6UX04 472 aaKnown RBP13.61□□□□□ -0.23
SMPD4-218ENST00000482171 TRPM2O94759 1503 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 MPNDQ8N594 471 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
SMPD4-218ENST00000482171 TBC1D2Q9BYX2 928 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 SMC3Q9UQE7 1217 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-218ENST00000482171 FLT4P35916 1363 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-218ENST00000482171 DDX17Q92841 729 aaKnown RBP13.61□□□□□ -0.23
SMPD4-218ENST00000482171 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
SMPD4-218ENST00000482171 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-218ENST00000482171 ADCY10Q96PN6 1610 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-218ENST00000482171 CDC42BPBQ9Y5S2 1711 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 ZMYM4Q5VZL5 1548 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 KDM5DQ9BY66 1539 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
SMPD4-218ENST00000482171 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
SMPD4-218ENST00000482171 HOXC9P31274 260 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 PANK2Q9BZ23 570 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 KDM4AO75164 1064 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 MX1P20591 662 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 RABEP1Q15276 862 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 C19orf44Q9H6X5 657 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
SMPD4-218ENST00000482171 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
SMPD4-218ENST00000482171 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 UPF3BQ9BZI7 483 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms