RNA–Protein interactions for RNA: ENST00000480432.5

RFC2-207, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-207ENST00000480432 ARXQ96QS3 562 aa26.85■■□□□ 1.89
RFC2-207ENST00000480432 SHANK3Q9BYB0 1731 aa26.84■■□□□ 1.89
RFC2-207ENST00000480432 DOT1LQ8TEK3 1739 aa26.83■■□□□ 1.89
RFC2-207ENST00000480432 SLC27A3Q5K4L6 730 aa26.83■■□□□ 1.89
RFC2-207ENST00000480432 AKT1S1Q96B36 256 aa26.83■■□□□ 1.89
RFC2-207ENST00000480432 MAP3K19Q56UN5 1328 aa26.83■■□□□ 1.89
RFC2-207ENST00000480432 RGPD2P0DJD1 1756 aa26.82■■□□□ 1.88
RFC2-207ENST00000480432 CGNL1Q0VF96 1302 aa26.82■■□□□ 1.88
RFC2-207ENST00000480432 LY75O60449 1722 aa26.82■■□□□ 1.88
RFC2-207ENST00000480432 FBLN1P23142 703 aa26.81■■□□□ 1.88
RFC2-207ENST00000480432 ZNF784Q8NCA9 323 aaPredicted RBP26.81■■□□□ 1.88
RFC2-207ENST00000480432 DDX54Q8TDD1 881 aaKnown RBP26.81■■□□□ 1.88
RFC2-207ENST00000480432 TUBGCP6Q96RT7 1819 aa26.81■■□□□ 1.88
RFC2-207ENST00000480432 LTV1Q96GA3 475 aaPredicted RBP26.8■■□□□ 1.88
RFC2-207ENST00000480432 PANK3Q9H999 370 aa26.8■■□□□ 1.88
RFC2-207ENST00000480432 KIF20BQ96Q89 1820 aa26.79■■□□□ 1.88
RFC2-207ENST00000480432 HOXC9P31274 260 aa26.79■■□□□ 1.88
RFC2-207ENST00000480432 SLC16A10Q8TF71 515 aa26.79■■□□□ 1.88
RFC2-207ENST00000480432 AMPHP49418 695 aa26.78■■□□□ 1.88
RFC2-207ENST00000480432 RTL1A6NKG5 1358 aa26.77■■□□□ 1.88
RFC2-207ENST00000480432 NSD2O96028 1365 aa26.77■■□□□ 1.88
RFC2-207ENST00000480432 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
RFC2-207ENST00000480432 MEGF6O75095 1541 aa26.75■■□□□ 1.87
RFC2-207ENST00000480432 KIF24Q5T7B8 1368 aa26.75■■□□□ 1.87
RFC2-207ENST00000480432 PNPLA7Q6ZV29 1317 aa26.75■■□□□ 1.87
RFC2-207ENST00000480432 RRS1Q15050 365 aaKnown RBP26.75■■□□□ 1.87
RFC2-207ENST00000480432 PRIM1P49642 420 aaKnown RBP26.74■■□□□ 1.87
RFC2-207ENST00000480432 ZCRB1Q8TBF4 217 aaKnown RBP26.73■■□□□ 1.87
RFC2-207ENST00000480432 UTRNP46939 3433 aa26.73■■□□□ 1.87
RFC2-207ENST00000480432 SYTL4Q96C24 671 aaPredicted RBP26.72■■□□□ 1.87
RFC2-207ENST00000480432 POLD1P28340 1107 aa26.7■■□□□ 1.86
RFC2-207ENST00000480432 TFCP2L1Q9NZI6 479 aa26.7■■□□□ 1.86
RFC2-207ENST00000480432 KCNQ4P56696 695 aa26.69■■□□□ 1.86
RFC2-207ENST00000480432 INSRP06213 1382 aa26.68■■□□□ 1.86
RFC2-207ENST00000480432 FLT4P35916 1363 aa26.68■■□□□ 1.86
RFC2-207ENST00000480432 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
RFC2-207ENST00000480432 NBPF6Q5VWK0 638 aa26.66■■□□□ 1.86
RFC2-207ENST00000480432 NBPF4Q96M43 638 aa26.66■■□□□ 1.86
RFC2-207ENST00000480432 GPR162Q16538 588 aa26.65■■□□□ 1.86
RFC2-207ENST00000480432 HSP90AB2PQ58FF8 381 aa26.65■■□□□ 1.86
RFC2-207ENST00000480432 CCNL1Q9UK58 526 aaPredicted RBP26.65■■□□□ 1.86
RFC2-207ENST00000480432 EMILIN1Q9Y6C2 1016 aa26.65■■□□□ 1.86
RFC2-207ENST00000480432 SMG6Q86US8 1419 aaKnown RBP26.65■■□□□ 1.86
RFC2-207ENST00000480432 WASHC2AQ641Q2 1341 aa26.64■■□□□ 1.85
RFC2-207ENST00000480432 POLKQ9UBT6 870 aa26.63■■□□□ 1.85
RFC2-207ENST00000480432 C5P01031 1676 aa26.63■■□□□ 1.85
RFC2-207ENST00000480432 ANKRD26Q9UPS8 1709 aa26.62■■□□□ 1.85
RFC2-207ENST00000480432 PER1O15534 1290 aaPredicted RBP26.61■■□□□ 1.85
RFC2-207ENST00000480432 KLHL34Q8N239 644 aa26.61■■□□□ 1.85
RFC2-207ENST00000480432 AMER1Q5JTC6 1135 aaPredicted RBP26.6■■□□□ 1.85
RFC2-207ENST00000480432 USHBP1Q8N6Y0 703 aa26.6■■□□□ 1.85
RFC2-207ENST00000480432 RAPGEF4Q8WZA2 1011 aa26.6■■□□□ 1.85
RFC2-207ENST00000480432 TAF1LQ8IZX4 1826 aa26.59■■□□□ 1.85
RFC2-207ENST00000480432 MORC1Q86VD1 984 aa26.58■■□□□ 1.85
RFC2-207ENST00000480432 COL23A1Q86Y22 540 aaPredicted RBP26.58■■□□□ 1.85
RFC2-207ENST00000480432 NLGN2Q8NFZ4 835 aa26.58■■□□□ 1.85
RFC2-207ENST00000480432 PPM1GO15355 546 aaPredicted RBP26.57■■□□□ 1.84
RFC2-207ENST00000480432 TATP17735 454 aaPredicted RBP26.57■■□□□ 1.84
RFC2-207ENST00000480432 C1QTNF8P60827 252 aa26.57■■□□□ 1.84
RFC2-207ENST00000480432 MAP2P11137 1827 aaKnown RBP26.57■■□□□ 1.84
RFC2-207ENST00000480432 PCDH11XQ9BZA7 1347 aa26.57■■□□□ 1.84
RFC2-207ENST00000480432 PCDH11YQ9BZA8 1340 aa26.57■■□□□ 1.84
RFC2-207ENST00000480432 TNNT2P45379 298 aaPredicted RBP26.56■■□□□ 1.84
RFC2-207ENST00000480432 PKD1L3Q7Z443 1732 aa26.55■■□□□ 1.84
RFC2-207ENST00000480432 TOGARAM1Q9Y4F4 1720 aa26.55■■□□□ 1.84
RFC2-207ENST00000480432 ITGB4P16144 1822 aa26.54■■□□□ 1.84
RFC2-207ENST00000480432 HMGB2P26583 209 aaKnown RBP26.54■■□□□ 1.84
RFC2-207ENST00000480432 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
RFC2-207ENST00000480432 MSH5O43196 834 aa26.52■■□□□ 1.84
RFC2-207ENST00000480432 PALLDQ8WX93 1383 aa26.52■■□□□ 1.84
RFC2-207ENST00000480432 NCAPD2Q15021 1401 aa26.51■■□□□ 1.83
RFC2-207ENST00000480432 NPC1L1Q9UHC9 1359 aa26.5■■□□□ 1.83
RFC2-207ENST00000480432 CYP27B1O15528 508 aa26.5■■□□□ 1.83
RFC2-207ENST00000480432 C4BP0C0L5 1744 aa26.5■■□□□ 1.83
RFC2-207ENST00000480432 SENP3-EIF4A1A0A087X0R7 540 aa26.49■■□□□ 1.83
RFC2-207ENST00000480432 YBX3P16989 372 aaKnown RBP eCLIP26.49■■□□□ 1.832e-7■■■■□ 20
RFC2-207ENST00000480432 GRIN3BO60391 1043 aa26.48■■□□□ 1.83
RFC2-207ENST00000480432 FLAD1Q8NFF5 587 aa26.48■■□□□ 1.83
RFC2-207ENST00000480432 EIF4A2Q14240 407 aaKnown RBP26.47■■□□□ 1.83
RFC2-207ENST00000480432 MSL1Q68DK7 614 aa26.47■■□□□ 1.83
RFC2-207ENST00000480432 MPRIPQ6WCQ1 1025 aa26.47■■□□□ 1.83
RFC2-207ENST00000480432 EYA1Q99502 592 aa26.47■■□□□ 1.83
RFC2-207ENST00000480432 UBR3Q6ZT12 1888 aa26.46■■□□□ 1.83
RFC2-207ENST00000480432 GIGYF1O75420 1035 aaPredicted RBP26.45■■□□□ 1.82
RFC2-207ENST00000480432 SMARCC1Q92922 1105 aaPredicted RBP26.45■■□□□ 1.82
RFC2-207ENST00000480432 CD2APQ9Y5K6 639 aa26.45■■□□□ 1.82
RFC2-207ENST00000480432 GOLGB1Q14789 3259 aaKnown RBP26.45■■□□□ 1.82
RFC2-207ENST00000480432 NKX1-1Q15270 411 aaPredicted RBP26.43■■□□□ 1.82
RFC2-207ENST00000480432 CC2D1BQ5T0F9 858 aaKnown RBP26.43■■□□□ 1.82
RFC2-207ENST00000480432 PIGBQ92521 554 aa26.4■■□□□ 1.82
RFC2-207ENST00000480432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.82
RFC2-207ENST00000480432 IGSF1Q8N6C5 1336 aa26.39■■□□□ 1.81
RFC2-207ENST00000480432 AMIGO3Q86WK7 504 aa26.38■■□□□ 1.81
RFC2-207ENST00000480432 AK7Q96M32 723 aa26.38■■□□□ 1.81
RFC2-207ENST00000480432 SPG7Q9UQ90 795 aa26.38■■□□□ 1.81
RFC2-207ENST00000480432 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
RFC2-207ENST00000480432 MTHFSP49914 203 aa26.37■■□□□ 1.81
RFC2-207ENST00000480432 ATP10DQ9P241 1426 aa26.34■■□□□ 1.81
RFC2-207ENST00000480432 IL13P35225 146 aa26.34■■□□□ 1.81
RFC2-207ENST00000480432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms